RNA–Protein interactions for RNA: ENST00000427561.5

UBA1-205, Transcript of ubiquitin like modifier activating enzyme 1, human

TSL 5

Gene UBA1, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBA1-205	ENST00000427561	CHST14	Q8NCH0	376 aa		13.99	□□□□□ -0.17
UBA1-205	ENST00000427561	OR13H1	Q8NG92	308 aa		13.99	□□□□□ -0.17
UBA1-205	ENST00000427561	PGAP3	Q96FM1	320 aa	Predicted RBP	13.99	□□□□□ -0.17
UBA1-205	ENST00000427561	IFT43	Q96FT9	208 aa		13.99	□□□□□ -0.17
UBA1-205	ENST00000427561	HDAC8	Q9BY41	377 aa		13.99	□□□□□ -0.17
UBA1-205	ENST00000427561	PDCL3	Q9H2J4	239 aa		13.99	□□□□□ -0.17
UBA1-205	ENST00000427561	FZD3	Q9NPG1	666 aa		13.99	□□□□□ -0.17
UBA1-205	ENST00000427561	EVA1B	Q9NVM1	165 aa		13.99	□□□□□ -0.17
UBA1-205	ENST00000427561	MPP6	Q9NZW5	540 aa		13.99	□□□□□ -0.17
UBA1-205	ENST00000427561	IL36A	Q9UHA7	158 aa		13.99	□□□□□ -0.17
UBA1-205	ENST00000427561	HS3ST3A1	Q9Y663	406 aa		13.99	□□□□□ -0.17
UBA1-205	ENST00000427561		A0A0D9SEW6	157 aa		13.98	□□□□□ -0.17
UBA1-205	ENST00000427561	TEX51	A0A1B0GUA7	166 aa		13.98	□□□□□ -0.17
UBA1-205	ENST00000427561		A6NNZ2	444 aa		13.98	□□□□□ -0.17
UBA1-205	ENST00000427561	GADD45B	O75293	160 aa	Predicted RBP	13.98	□□□□□ -0.17
UBA1-205	ENST00000427561	GIMD1	P0DJR0	217 aa		13.98	□□□□□ -0.17
UBA1-205	ENST00000427561	CKMT1A	P12532	417 aa		13.98	□□□□□ -0.17
UBA1-205	ENST00000427561	OR1E1	P30953	314 aa		13.98	□□□□□ -0.17
UBA1-205	ENST00000427561	MTIF2	P46199	727 aa	Known RBP	13.98	□□□□□ -0.17
UBA1-205	ENST00000427561	DUSP3	P51452	185 aa	Predicted RBP	13.98	□□□□□ -0.17
UBA1-205	ENST00000427561	CLDN2	P57739	230 aa		13.98	□□□□□ -0.17
UBA1-205	ENST00000427561	SLC20A2	Q08357	652 aa		13.98	□□□□□ -0.17
UBA1-205	ENST00000427561	CCDC173	Q0VFZ6	552 aa		13.98	□□□□□ -0.17
UBA1-205	ENST00000427561	RETSAT	Q6NUM9	610 aa		13.98	□□□□□ -0.17
UBA1-205	ENST00000427561	C22orf39	Q6P5X5	142 aa		13.98	□□□□□ -0.17
UBA1-205	ENST00000427561	LINGO4	Q6UY18	593 aa		13.98	□□□□□ -0.17
UBA1-205	ENST00000427561	ZNF783	Q6ZMS7	281 aa		13.98	□□□□□ -0.17
UBA1-205	ENST00000427561		Q6ZSR6	202 aa		13.98	□□□□□ -0.17
UBA1-205	ENST00000427561	ABI3BP	Q7Z7G0	1075 aa		13.98	□□□□□ -0.17
UBA1-205	ENST00000427561	ZNF683	Q8IZ20	524 aa		13.98	□□□□□ -0.17
UBA1-205	ENST00000427561	LSMEM2	Q8N112	164 aa		13.98	□□□□□ -0.17
UBA1-205	ENST00000427561	TMEM35B	Q8NCS4	154 aa		13.98	□□□□□ -0.17
UBA1-205	ENST00000427561	GRIN3A	Q8TCU5	1115 aa		13.98	□□□□□ -0.17
UBA1-205	ENST00000427561	NT5C3B	Q969T7	300 aa		13.98	□□□□□ -0.17
UBA1-205	ENST00000427561	FEM1C	Q96JP0	617 aa		13.98	□□□□□ -0.17
UBA1-205	ENST00000427561	APOLD1	Q96LR9	279 aa		13.98	□□□□□ -0.17
UBA1-205	ENST00000427561	DUSP23	Q9BVJ7	150 aa		13.98	□□□□□ -0.17
UBA1-205	ENST00000427561	TNKS2	Q9H2K2	1166 aa		13.98	□□□□□ -0.17
UBA1-205	ENST00000427561	PLCB1	Q9NQ66	1216 aa		13.98	□□□□□ -0.17
UBA1-205	ENST00000427561	ANLN	Q9NQW6	1124 aa		13.98	□□□□□ -0.17
UBA1-205	ENST00000427561	NLGN3	Q9NZ94	848 aa		13.98	□□□□□ -0.17
UBA1-205	ENST00000427561	ZFR2	Q9UPR6	939 aa	Known RBP	13.98	□□□□□ -0.17
UBA1-205	ENST00000427561	SNX10	Q9Y5X0	201 aa		13.98	□□□□□ -0.17
UBA1-205	ENST00000427561	IGLV3-10	A0A075B6K4	115 aa		13.97	□□□□□ -0.17
UBA1-205	ENST00000427561	ILVBL	A1L0T0	632 aa		13.97	□□□□□ -0.17
UBA1-205	ENST00000427561		I6L893	689 aa	Predicted RBP	13.97	□□□□□ -0.17
UBA1-205	ENST00000427561	RNF103	O00237	685 aa		13.97	□□□□□ -0.17
UBA1-205	ENST00000427561	SCAMP1	O15126	338 aa		13.97	□□□□□ -0.17
UBA1-205	ENST00000427561	OPA1	O60313	960 aa		13.97	□□□□□ -0.17
UBA1-205	ENST00000427561	LEFTY1	O75610	366 aa		13.97	□□□□□ -0.17
UBA1-205	ENST00000427561	PRB1	P04280	392 aa		13.97	□□□□□ -0.17
UBA1-205	ENST00000427561	GP1BA	P07359	652 aa		13.97	□□□□□ -0.17
UBA1-205	ENST00000427561	TFE3	P19532	575 aa	Predicted RBP	13.97	□□□□□ -0.17
UBA1-205	ENST00000427561	SCNN1A	P37088	669 aa		13.97	□□□□□ -0.17
UBA1-205	ENST00000427561	NEK3	P51956	506 aa		13.97	□□□□□ -0.17
UBA1-205	ENST00000427561	HNRNPK	P61978	463 aa	Known RBP eCLIP	13.97	□□□□□ -0.17	2e-8	■■□□□ 12.6
UBA1-205	ENST00000427561	RPS21	P63220	83 aa	Known RBP	13.97	□□□□□ -0.17
UBA1-205	ENST00000427561	SLC25A52	Q3SY17	297 aa		13.97	□□□□□ -0.17
UBA1-205	ENST00000427561	TMEM259	Q4ZIN3	620 aa		13.97	□□□□□ -0.17
UBA1-205	ENST00000427561	CDCP2	Q5VXM1	449 aa		13.97	□□□□□ -0.17
UBA1-205	ENST00000427561	SEL1L3	Q68CR1	1132 aa		13.97	□□□□□ -0.17
UBA1-205	ENST00000427561	KIAA1161	Q6NSJ0	714 aa		13.97	□□□□□ -0.17
UBA1-205	ENST00000427561	GCNT7	Q6ZNI0	430 aa		13.97	□□□□□ -0.17
UBA1-205	ENST00000427561	DPY19L3	Q6ZPD9	716 aa		13.97	□□□□□ -0.17
UBA1-205	ENST00000427561	TFAP2D	Q7Z6R9	452 aa		13.97	□□□□□ -0.17
UBA1-205	ENST00000427561	ERICH1	Q86X53	443 aa		13.97	□□□□□ -0.17
UBA1-205	ENST00000427561	SPACA3	Q8IXA5	215 aa		13.97	□□□□□ -0.17
UBA1-205	ENST00000427561	FAM71A	Q8IYT1	594 aa		13.97	□□□□□ -0.17
UBA1-205	ENST00000427561	SLC22A18AS	Q8N1D0	253 aa		13.97	□□□□□ -0.17
UBA1-205	ENST00000427561	FAM181A	Q8N9Y4	354 aa		13.97	□□□□□ -0.17
UBA1-205	ENST00000427561	ZNF248	Q8NDW4	579 aa		13.97	□□□□□ -0.17
UBA1-205	ENST00000427561	OR7D4	Q8NG98	312 aa		13.97	□□□□□ -0.17
UBA1-205	ENST00000427561	C18orf8	Q96DM3	657 aa		13.97	□□□□□ -0.17
UBA1-205	ENST00000427561	BMF	Q96LC9	184 aa		13.97	□□□□□ -0.17
UBA1-205	ENST00000427561	ZNF578	Q96N58	590 aa	Predicted RBP	13.97	□□□□□ -0.17
UBA1-205	ENST00000427561	DEPDC7	Q96QD5	511 aa		13.97	□□□□□ -0.17
UBA1-205	ENST00000427561	TBCB	Q99426	244 aa		13.97	□□□□□ -0.17
UBA1-205	ENST00000427561	LGMN	Q99538	433 aa		13.97	□□□□□ -0.17
UBA1-205	ENST00000427561	HEPH	Q9BQS7	1158 aa		13.97	□□□□□ -0.17
UBA1-205	ENST00000427561	SPON2	Q9BUD6	331 aa		13.97	□□□□□ -0.17
UBA1-205	ENST00000427561	SLC17A9	Q9BYT1	436 aa		13.97	□□□□□ -0.17
UBA1-205	ENST00000427561	CEP44	Q9C0F1	390 aa		13.97	□□□□□ -0.17
UBA1-205	ENST00000427561	ABCG4	Q9H172	646 aa		13.97	□□□□□ -0.17
UBA1-205	ENST00000427561	USP29	Q9HBJ7	922 aa		13.97	□□□□□ -0.17
UBA1-205	ENST00000427561	SIX2	Q9NPC8	291 aa		13.97	□□□□□ -0.17
UBA1-205	ENST00000427561	DNAJC28	Q9NX36	388 aa		13.97	□□□□□ -0.17
UBA1-205	ENST00000427561	KIAA1468	Q9P260	1216 aa		13.97	□□□□□ -0.17
UBA1-205	ENST00000427561	AJAP1	Q9UKB5	411 aa	Predicted RBP	13.97	□□□□□ -0.17
UBA1-205	ENST00000427561	PCDHB1	Q9Y5F3	818 aa		13.97	□□□□□ -0.17
UBA1-205	ENST00000427561	WASF2	Q9Y6W5	498 aa		13.97	□□□□□ -0.17
UBA1-205	ENST00000427561	ITPR1	Q14643	2758 aa		13.97	□□□□□ -0.17
UBA1-205	ENST00000427561	CELSR3	Q9NYQ7	3312 aa		13.96	□□□□□ -0.17
UBA1-205	ENST00000427561	SRGAP2	O75044	1071 aa		13.96	□□□□□ -0.17
UBA1-205	ENST00000427561	ENDOD1	O94919	500 aa		13.96	□□□□□ -0.17
UBA1-205	ENST00000427561	PAK4	O96013	591 aa	Predicted RBP	13.96	□□□□□ -0.17
UBA1-205	ENST00000427561	ITGB7	P26010	798 aa		13.96	□□□□□ -0.17
UBA1-205	ENST00000427561	L1CAM	P32004	1257 aa		13.96	□□□□□ -0.17
UBA1-205	ENST00000427561	CDH5	P33151	784 aa	Predicted RBP	13.96	□□□□□ -0.17
UBA1-205	ENST00000427561	GABRB2	P47870	512 aa		13.96	□□□□□ -0.17
UBA1-205	ENST00000427561	TLE3	Q04726	772 aa		13.96	□□□□□ -0.17

Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms