RNA–Protein interactions for RNA: ENST00000423636.6

PTPRN-204, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPRN, Length 3,313 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-204ENST00000423636 MAP2K2P36507 400 aa12.13□□□□□ -0.47
PTPRN-204ENST00000423636 NME5P56597 212 aa12.13□□□□□ -0.47
PTPRN-204ENST00000423636 SLC20A2Q08357 652 aa12.13□□□□□ -0.47
PTPRN-204ENST00000423636 PPIDQ08752 370 aaKnown RBP12.13□□□□□ -0.47
PTPRN-204ENST00000423636 VARS2Q5ST30 1063 aaKnown RBP12.13□□□□□ -0.47
PTPRN-204ENST00000423636 MBLAC2Q68D91 279 aa12.13□□□□□ -0.47
PTPRN-204ENST00000423636 BZW1Q7L1Q6 419 aaKnown RBP12.13□□□□□ -0.47
PTPRN-204ENST00000423636 C16orf59Q7L2K0 433 aa12.13□□□□□ -0.47
PTPRN-204ENST00000423636 CFAP61Q8NHU2 1237 aa12.13□□□□□ -0.47
PTPRN-204ENST00000423636 GIMAP7Q8NHV1 300 aa12.13□□□□□ -0.47
PTPRN-204ENST00000423636 ELMO2Q96JJ3 720 aa12.13□□□□□ -0.47
PTPRN-204ENST00000423636 RPRD1AQ96P16 312 aaPredicted RBP12.13□□□□□ -0.47
PTPRN-204ENST00000423636 OR52B2Q96RD2 323 aa12.13□□□□□ -0.47
PTPRN-204ENST00000423636 DNAI2Q9GZS0 605 aa12.13□□□□□ -0.47
PTPRN-204ENST00000423636 NACA2Q9H009 215 aa12.13□□□□□ -0.47
PTPRN-204ENST00000423636 LRRC40Q9H9A6 602 aa12.13□□□□□ -0.47
PTPRN-204ENST00000423636 IPO11Q9UI26 975 aaKnown RBP12.13□□□□□ -0.47
PTPRN-204ENST00000423636 A0A0D9SEW6 157 aa12.12□□□□□ -0.47
PTPRN-204ENST00000423636 CA12O43570 354 aa12.12□□□□□ -0.47
PTPRN-204ENST00000423636 GP5P40197 560 aa12.12□□□□□ -0.47
PTPRN-204ENST00000423636 RPL34P49207 117 aaKnown RBP12.12□□□□□ -0.47
PTPRN-204ENST00000423636 SEMA3BQ13214 749 aa12.12□□□□□ -0.47
PTPRN-204ENST00000423636 CSHL1Q14406 222 aa12.12□□□□□ -0.47
PTPRN-204ENST00000423636 RAB41Q5JT25 222 aa12.12□□□□□ -0.47
PTPRN-204ENST00000423636 CFAP157Q5JU67 520 aa12.12□□□□□ -0.47
PTPRN-204ENST00000423636 PIM3Q86V86 326 aa12.12□□□□□ -0.47
PTPRN-204ENST00000423636 TEX9Q8N6V9 391 aa12.12□□□□□ -0.47
PTPRN-204ENST00000423636 BLOC1S5Q8TDH9 187 aa12.12□□□□□ -0.47
PTPRN-204ENST00000423636 SKA1Q96BD8 255 aa12.12□□□□□ -0.47
PTPRN-204ENST00000423636 GLT1D1Q96MS3 346 aa12.12□□□□□ -0.47
PTPRN-204ENST00000423636 ZNF570Q96NI8 536 aa12.12□□□□□ -0.47
PTPRN-204ENST00000423636 ACBD6Q9BR61 282 aa12.12□□□□□ -0.47
PTPRN-204ENST00000423636 ATP6AP2A0A1C7CYW4 349 aa12.12□□□□□ -0.47
PTPRN-204ENST00000423636 IRAK2O43187 625 aa12.12□□□□□ -0.47
PTPRN-204ENST00000423636 SPAG6O75602 509 aa12.12□□□□□ -0.47
PTPRN-204ENST00000423636 ATP6AP2O75787 350 aa12.12□□□□□ -0.47
PTPRN-204ENST00000423636 PTPN4P29074 926 aa12.12□□□□□ -0.47
PTPRN-204ENST00000423636 CCR1P32246 355 aa12.12□□□□□ -0.47
PTPRN-204ENST00000423636 CLNS1AP54105 237 aaKnown RBP12.12□□□□□ -0.47
PTPRN-204ENST00000423636 ATG16L1Q676U5 607 aa12.12□□□□□ -0.47
PTPRN-204ENST00000423636 RNF19BQ6ZMZ0 732 aa12.12□□□□□ -0.47
PTPRN-204ENST00000423636 GBA3Q9H227 469 aa12.12□□□□□ -0.47
PTPRN-204ENST00000423636 LRMDAQ9H2I8 198 aa12.12□□□□□ -0.47
PTPRN-204ENST00000423636 PNPLA8Q9NP80 782 aa12.12□□□□□ -0.47
PTPRN-204ENST00000423636 TMEM86AQ8N2M4 240 aa12.11□□□□□ -0.47
PTPRN-204ENST00000423636 PYDC1Q8WXC3 89 aa12.11□□□□□ -0.47
PTPRN-204ENST00000423636 FBXO32Q969P5 355 aa12.11□□□□□ -0.47
PTPRN-204ENST00000423636 ERLEC1Q96DZ1 483 aa12.11□□□□□ -0.47
PTPRN-204ENST00000423636 PHACTR1Q9C0D0 580 aa12.11□□□□□ -0.47
PTPRN-204ENST00000423636 STARD7Q9NQZ5 370 aa12.11□□□□□ -0.47
PTPRN-204ENST00000423636 COPG2Q9UBF2 871 aa12.11□□□□□ -0.47
PTPRN-204ENST00000423636 CASP8AP2Q9UKL3 1982 aa12.11□□□□□ -0.47
PTPRN-204ENST00000423636 HACD1B0YJ81 288 aa12.11□□□□□ -0.47
PTPRN-204ENST00000423636 BNIP3LO60238 219 aa12.11□□□□□ -0.47
PTPRN-204ENST00000423636 MAFKO60675 156 aa12.11□□□□□ -0.47
PTPRN-204ENST00000423636 PROCP04070 461 aa12.11□□□□□ -0.47
PTPRN-204ENST00000423636 RTP2Q5QGT7 225 aa12.11□□□□□ -0.47
PTPRN-204ENST00000423636 FAM171BQ6P995 826 aa12.11□□□□□ -0.47
PTPRN-204ENST00000423636 LINGO4Q6UY18 593 aa12.11□□□□□ -0.47
PTPRN-204ENST00000423636 DCBLD1Q8N8Z6 715 aa12.11□□□□□ -0.47
PTPRN-204ENST00000423636 OR6K2Q8NGY2 324 aa12.11□□□□□ -0.47
PTPRN-204ENST00000423636 SORT1Q99523 831 aa12.11□□□□□ -0.47
PTPRN-204ENST00000423636 BTBD10Q9BSF8 475 aa12.11□□□□□ -0.47
PTPRN-204ENST00000423636 SIRPGQ9P1W8 387 aa12.11□□□□□ -0.47
PTPRN-204ENST00000423636 PDCD11Q14690 1871 aaKnown RBP12.11□□□□□ -0.47
PTPRN-204ENST00000423636 AIM2O14862 343 aa12.11□□□□□ -0.47
PTPRN-204ENST00000423636 FBXO21O94952 628 aa12.11□□□□□ -0.47
PTPRN-204ENST00000423636 SLC1A2P43004 574 aa12.11□□□□□ -0.47
PTPRN-204ENST00000423636 ARSDP51689 593 aa12.11□□□□□ -0.47
PTPRN-204ENST00000423636 TAF11Q15544 211 aa12.11□□□□□ -0.47
PTPRN-204ENST00000423636 FAM156AQ8NDB6 213 aa12.11□□□□□ -0.47
PTPRN-204ENST00000423636 OR52K2Q8NGK3 314 aa12.11□□□□□ -0.47
PTPRN-204ENST00000423636 PTCD3Q96EY7 689 aaKnown RBP12.11□□□□□ -0.47
PTPRN-204ENST00000423636 RBBP8Q99708 897 aa12.11□□□□□ -0.47
PTPRN-204ENST00000423636 COG4Q9H9E3 785 aa12.11□□□□□ -0.47
PTPRN-204ENST00000423636 GIMAP2Q9UG22 337 aa12.11□□□□□ -0.47
PTPRN-204ENST00000423636 DOCK6Q96HP0 2047 aa12.11□□□□□ -0.47
PTPRN-204ENST00000423636 RPS24P62847 133 aaKnown RBP12.1□□□□□ -0.47
PTPRN-204ENST00000423636 SP3Q02447 781 aa12.1□□□□□ -0.47
PTPRN-204ENST00000423636 GALNT2Q10471 571 aa12.1□□□□□ -0.47
PTPRN-204ENST00000423636 DLG1Q12959 904 aa12.1□□□□□ -0.47
PTPRN-204ENST00000423636 SPDYAQ5MJ70 313 aa12.1□□□□□ -0.47
PTPRN-204ENST00000423636 RGS9BPQ6ZS82 235 aa12.1□□□□□ -0.47
PTPRN-204ENST00000423636 PDZD4Q76G19 769 aaPredicted RBP12.1□□□□□ -0.47
PTPRN-204ENST00000423636 ZNF598Q86UK7 904 aaKnown RBP12.1□□□□□ -0.47
PTPRN-204ENST00000423636 USP13Q92995 863 aaPredicted RBP12.1□□□□□ -0.47
PTPRN-204ENST00000423636 ESAMQ96AP7 390 aa12.1□□□□□ -0.47
PTPRN-204ENST00000423636 TBL1YQ9BQ87 522 aa12.1□□□□□ -0.47
PTPRN-204ENST00000423636 GATA5Q9BWX5 397 aaPredicted RBP12.1□□□□□ -0.47
PTPRN-204ENST00000423636 TLK1Q9UKI8 766 aa12.1□□□□□ -0.47
PTPRN-204ENST00000423636 LRRC14BA6NHZ5 514 aa12.1□□□□□ -0.47
PTPRN-204ENST00000423636 STX16-NPEPL1H3BU86 382 aa12.1□□□□□ -0.47
PTPRN-204ENST00000423636 NDC80O14777 642 aa12.1□□□□□ -0.47
PTPRN-204ENST00000423636 KCNA5P22460 613 aa12.1□□□□□ -0.47
PTPRN-204ENST00000423636 PTDSS1P48651 473 aaKnown RBP12.1□□□□□ -0.47
PTPRN-204ENST00000423636 RASSF2P50749 326 aa12.1□□□□□ -0.47
PTPRN-204ENST00000423636 WNT3AP56704 352 aa12.1□□□□□ -0.47
PTPRN-204ENST00000423636 WDR75Q8IWA0 830 aaKnown RBP12.1□□□□□ -0.47
PTPRN-204ENST00000423636 OR7D4Q8NG98 312 aa12.1□□□□□ -0.47
PTPRN-204ENST00000423636 PIWIL2Q8TC59 973 aaKnown RBP12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms