RNA–Protein interactions for RNA: ENST00000423161.3

SREBF1-206, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 1,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-206ENST00000423161 KANSL1Q7Z3B3 1105 aa18.89■□□□□ 0.61
SREBF1-206ENST00000423161 ZNF677Q86XU0 584 aa18.89■□□□□ 0.61
SREBF1-206ENST00000423161 EMC1Q8N766 993 aa18.89■□□□□ 0.61
SREBF1-206ENST00000423161 PDCD7Q8N8D1 485 aaKnown RBP18.89■□□□□ 0.61
SREBF1-206ENST00000423161 KLHDC7BQ96G42 594 aa18.89■□□□□ 0.61
SREBF1-206ENST00000423161 SPON2Q9BUD6 331 aa18.89■□□□□ 0.61
SREBF1-206ENST00000423161 ZYG11BQ9C0D3 744 aa18.89■□□□□ 0.61
SREBF1-206ENST00000423161 ZNF212Q9UDV6 495 aa18.89■□□□□ 0.61
SREBF1-206ENST00000423161 IL36AQ9UHA7 158 aa18.89■□□□□ 0.61
SREBF1-206ENST00000423161 NOCTQ9UK39 431 aaKnown RBP18.89■□□□□ 0.61
SREBF1-206ENST00000423161 RNF103O00237 685 aa18.88■□□□□ 0.61
SREBF1-206ENST00000423161 SDC3O75056 442 aa18.88■□□□□ 0.61
SREBF1-206ENST00000423161 ENDOD1O94919 500 aa18.88■□□□□ 0.61
SREBF1-206ENST00000423161 C1SP09871 688 aa18.88■□□□□ 0.61
SREBF1-206ENST00000423161 CDK4P11802 303 aa18.88■□□□□ 0.61
SREBF1-206ENST00000423161 HNF1BP35680 557 aa18.88■□□□□ 0.61
SREBF1-206ENST00000423161 CLDN6P56747 220 aa18.88■□□□□ 0.61
SREBF1-206ENST00000423161 ARSIQ5FYB1 569 aa18.88■□□□□ 0.61
SREBF1-206ENST00000423161 RETSATQ6NUM9 610 aa18.88■□□□□ 0.61
SREBF1-206ENST00000423161 DPY19L3Q6ZPD9 716 aa18.88■□□□□ 0.61
SREBF1-206ENST00000423161 ERN2Q76MJ5 926 aaKnown RBP18.88■□□□□ 0.61
SREBF1-206ENST00000423161 HORMAD1Q86X24 394 aa18.88■□□□□ 0.61
SREBF1-206ENST00000423161 DRC7Q8IY82 874 aa18.88■□□□□ 0.61
SREBF1-206ENST00000423161 TMEM145Q8NBT3 493 aa18.88■□□□□ 0.61
SREBF1-206ENST00000423161 TSC1Q92574 1164 aa18.88■□□□□ 0.61
SREBF1-206ENST00000423161 PPP1R16AQ96I34 528 aa18.88■□□□□ 0.61
SREBF1-206ENST00000423161 VPS16Q9H269 839 aa18.88■□□□□ 0.61
SREBF1-206ENST00000423161 ATP13A1Q9HD20 1204 aa18.88■□□□□ 0.61
SREBF1-206ENST00000423161 ATRXP46100 2492 aa18.88■□□□□ 0.61
SREBF1-206ENST00000423161 LEFTY1O75610 366 aa18.87■□□□□ 0.61
SREBF1-206ENST00000423161 ZMPSTE24O75844 475 aa18.87■□□□□ 0.61
SREBF1-206ENST00000423161 PCDH8O95206 1070 aa18.87■□□□□ 0.61
SREBF1-206ENST00000423161 THEGLP0DJG4 465 aa18.87■□□□□ 0.61
SREBF1-206ENST00000423161 HOXB3P14651 431 aaPredicted RBP18.87■□□□□ 0.61
SREBF1-206ENST00000423161 KLK7P49862 253 aa18.87■□□□□ 0.61
SREBF1-206ENST00000423161 SERPINH1P50454 418 aaKnown RBP18.87■□□□□ 0.61
SREBF1-206ENST00000423161 GNA12Q03113 381 aa18.87■□□□□ 0.61
SREBF1-206ENST00000423161 CDO1Q16878 200 aa18.87■□□□□ 0.61
SREBF1-206ENST00000423161 COL28A1Q2UY09 1125 aa18.87■□□□□ 0.61
SREBF1-206ENST00000423161 ZNF284Q2VY69 593 aa18.87■□□□□ 0.61
SREBF1-206ENST00000423161 RAB6CQ53S08 254 aa18.87■□□□□ 0.61
SREBF1-206ENST00000423161 ENOX1Q8TC92 643 aaKnown RBP18.87■□□□□ 0.61
SREBF1-206ENST00000423161 HDAC8Q9BY41 377 aa18.87■□□□□ 0.61
SREBF1-206ENST00000423161 CEP44Q9C0F1 390 aa18.87■□□□□ 0.61
SREBF1-206ENST00000423161 RAB6CQ9H0N0 254 aa18.87■□□□□ 0.61
SREBF1-206ENST00000423161 FZD3Q9NPG1 666 aa18.87■□□□□ 0.61
SREBF1-206ENST00000423161 FAM207AQ9NSI2 230 aaPredicted RBP18.87■□□□□ 0.61
SREBF1-206ENST00000423161 PPARGC1AQ9UBK2 798 aaKnown RBP18.87■□□□□ 0.61
SREBF1-206ENST00000423161 WASF2Q9Y6W5 498 aa18.87■□□□□ 0.61
SREBF1-206ENST00000423161 ZNF821O75541 412 aaPredicted RBP18.86■□□□□ 0.61
SREBF1-206ENST00000423161 CYP1A1P04798 512 aaPredicted RBP18.86■□□□□ 0.61
SREBF1-206ENST00000423161 TPM2P07951 284 aa18.86■□□□□ 0.61
SREBF1-206ENST00000423161 JUPP14923 745 aa18.86■□□□□ 0.61
SREBF1-206ENST00000423161 HNRNPA2B1P22626 353 aaKnown RBP18.86■□□□□ 0.61
SREBF1-206ENST00000423161 MMP8P22894 467 aa18.86■□□□□ 0.61
SREBF1-206ENST00000423161 AKT2P31751 481 aa18.86■□□□□ 0.61
SREBF1-206ENST00000423161 DNA2P51530 1060 aa18.86■□□□□ 0.61
SREBF1-206ENST00000423161 POLR2FP61218 127 aaKnown RBP18.86■□□□□ 0.61
SREBF1-206ENST00000423161 FMO1Q01740 532 aa18.86■□□□□ 0.61
SREBF1-206ENST00000423161 CDR2Q01850 454 aa18.86■□□□□ 0.61
SREBF1-206ENST00000423161 SLC20A2Q08357 652 aa18.86■□□□□ 0.61
SREBF1-206ENST00000423161 KRT31Q15323 416 aa18.86■□□□□ 0.61
SREBF1-206ENST00000423161 C15orf59Q2T9L4 293 aaPredicted RBP18.86■□□□□ 0.61
SREBF1-206ENST00000423161 CDKAL1Q5VV42 579 aa18.86■□□□□ 0.61
SREBF1-206ENST00000423161 PHLDB2Q86SQ0 1253 aa18.86■□□□□ 0.61
SREBF1-206ENST00000423161 PCDH20Q8N6Y1 951 aaKnown RBP18.86■□□□□ 0.61
SREBF1-206ENST00000423161 RXFP2Q8WXD0 754 aa18.86■□□□□ 0.61
SREBF1-206ENST00000423161 C11orf70Q9BRQ4 267 aa18.86■□□□□ 0.61
SREBF1-206ENST00000423161 CALN1Q9BXU9 219 aa18.86■□□□□ 0.61
SREBF1-206ENST00000423161 NLRC4Q9NPP4 1024 aa18.86■□□□□ 0.61
SREBF1-206ENST00000423161 ZFR2Q9UPR6 939 aaKnown RBP18.86■□□□□ 0.61
SREBF1-206ENST00000423161 CKMT2P17540 419 aa18.85■□□□□ 0.61
SREBF1-206ENST00000423161 CHRNB2P17787 502 aa18.85■□□□□ 0.61
SREBF1-206ENST00000423161 SDC4P31431 198 aa18.85■□□□□ 0.61
SREBF1-206ENST00000423161 SOX5P35711 763 aa18.85■□□□□ 0.61
SREBF1-206ENST00000423161 NEK3P51956 506 aa18.85■□□□□ 0.61
SREBF1-206ENST00000423161 ARF5P84085 180 aa18.85■□□□□ 0.61
SREBF1-206ENST00000423161 ARL13BQ3SXY8 428 aa18.85■□□□□ 0.61
SREBF1-206ENST00000423161 FKBP15Q5T1M5 1219 aa18.85■□□□□ 0.61
SREBF1-206ENST00000423161 HES3Q5TGS1 186 aa18.85■□□□□ 0.61
SREBF1-206ENST00000423161 SEL1L3Q68CR1 1132 aa18.85■□□□□ 0.61
SREBF1-206ENST00000423161 OR13H1Q8NG92 308 aa18.85■□□□□ 0.61
SREBF1-206ENST00000423161 SLC30A5Q8TAD4 765 aa18.85■□□□□ 0.61
SREBF1-206ENST00000423161 HNRNPLLQ8WVV9 542 aaKnown RBP18.85■□□□□ 0.61
SREBF1-206ENST00000423161 NXPE2Q96DL1 559 aa18.85■□□□□ 0.61
SREBF1-206ENST00000423161 HEPHQ9BQS7 1158 aa18.85■□□□□ 0.61
SREBF1-206ENST00000423161 OR12D3Q9UGF7 316 aa18.85■□□□□ 0.61
SREBF1-206ENST00000423161 FCF1Q9Y324 198 aaKnown RBP18.85■□□□□ 0.61
SREBF1-206ENST00000423161 EPHB6O15197 1021 aa18.84■□□□□ 0.61
SREBF1-206ENST00000423161 ITGB7P26010 798 aa18.84■□□□□ 0.61
SREBF1-206ENST00000423161 ADRA1BP35368 520 aa18.84■□□□□ 0.61
SREBF1-206ENST00000423161 ACVRL1P37023 503 aa18.84■□□□□ 0.61
SREBF1-206ENST00000423161 ETFBP38117 255 aa18.84■□□□□ 0.61
SREBF1-206ENST00000423161 CCNHP51946 323 aaPredicted RBP18.84■□□□□ 0.61
SREBF1-206ENST00000423161 JAM2P57087 298 aa18.84■□□□□ 0.61
SREBF1-206ENST00000423161 CLDN2P57739 230 aa18.84■□□□□ 0.61
SREBF1-206ENST00000423161 NRG1Q02297 640 aaPredicted RBP18.84■□□□□ 0.61
SREBF1-206ENST00000423161 ILKQ13418 452 aa18.84■□□□□ 0.61
SREBF1-206ENST00000423161 CCDC14Q49A88 953 aa18.84■□□□□ 0.61
SREBF1-206ENST00000423161 TMEM259Q4ZIN3 620 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms