RNA–Protein interactions for RNA: ENST00000421756.5

MCF2L-213, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best) BASIC

Gene MCF2L, Length 3,560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-213ENST00000421756 VHLP40337 213 aa13.56□□□□□ -0.24
MCF2L-213ENST00000421756 LHX1P48742 406 aa13.56□□□□□ -0.24
MCF2L-213ENST00000421756 GATMP50440 423 aa13.56□□□□□ -0.24
MCF2L-213ENST00000421756 TRIP10Q15642 601 aa13.56□□□□□ -0.24
MCF2L-213ENST00000421756 CNSTQ6PJW8 725 aa13.56□□□□□ -0.24
MCF2L-213ENST00000421756 DCBLD1Q8N8Z6 715 aa13.56□□□□□ -0.24
MCF2L-213ENST00000421756 BLOC1S5Q8TDH9 187 aa13.56□□□□□ -0.24
MCF2L-213ENST00000421756 NDE1Q9NXR1 346 aa13.56□□□□□ -0.24
MCF2L-213ENST00000421756 OTOFQ9HC10 1997 aa13.56□□□□□ -0.24
MCF2L-213ENST00000421756 CD86P42081 329 aa13.56□□□□□ -0.24
MCF2L-213ENST00000421756 WASHC2DQ5SRD0 308 aa13.56□□□□□ -0.24
MCF2L-213ENST00000421756 PCDH20Q8N6Y1 951 aaKnown RBP13.56□□□□□ -0.24
MCF2L-213ENST00000421756 DNAJB4Q9UDY4 337 aa13.56□□□□□ -0.24
MCF2L-213ENST00000421756 GIMAP2Q9UG22 337 aa13.56□□□□□ -0.24
MCF2L-213ENST00000421756 HACD1B0YJ81 288 aa13.55□□□□□ -0.24
MCF2L-213ENST00000421756 PRSS56P0CW18 603 aa13.55□□□□□ -0.24
MCF2L-213ENST00000421756 TBL3Q12788 808 aaKnown RBP13.55□□□□□ -0.24
MCF2L-213ENST00000421756 KYAT3Q6YP21 454 aaKnown RBP13.55□□□□□ -0.24
MCF2L-213ENST00000421756 MARK2Q7KZI7 788 aaKnown RBP13.55□□□□□ -0.24
MCF2L-213ENST00000421756 FSTL5Q8N475 847 aaPredicted RBP13.55□□□□□ -0.24
MCF2L-213ENST00000421756 GALNT4Q8N4A0 578 aa13.55□□□□□ -0.24
MCF2L-213ENST00000421756 CPNE1Q99829 537 aa13.55□□□□□ -0.24
MCF2L-213ENST00000421756 NACA2Q9H009 215 aa13.55□□□□□ -0.24
MCF2L-213ENST00000421756 ZCWPW1Q9H0M4 648 aa13.55□□□□□ -0.24
MCF2L-213ENST00000421756 SPC25Q9HBM1 224 aa13.55□□□□□ -0.24
MCF2L-213ENST00000421756 SOX13Q9UN79 622 aa13.55□□□□□ -0.24
MCF2L-213ENST00000421756 SSX2IPQ9Y2D8 614 aa13.55□□□□□ -0.24
MCF2L-213ENST00000421756 TRPV2Q9Y5S1 764 aa13.55□□□□□ -0.24
MCF2L-213ENST00000421756 WDR90Q96KV7 1748 aa13.55□□□□□ -0.24
MCF2L-213ENST00000421756 RGPD3A6NKT7 1758 aaPredicted RBP13.55□□□□□ -0.24
MCF2L-213ENST00000421756 RGPD4Q7Z3J3 1758 aa13.55□□□□□ -0.24
MCF2L-213ENST00000421756 NCF1BA6NI72 391 aaPredicted RBP13.55□□□□□ -0.24
MCF2L-213ENST00000421756 NCF1CA8MVU1 366 aaPredicted RBP13.55□□□□□ -0.24
MCF2L-213ENST00000421756 TGDSO95455 350 aa13.55□□□□□ -0.24
MCF2L-213ENST00000421756 NCF1P14598 390 aaPredicted RBP13.55□□□□□ -0.24
MCF2L-213ENST00000421756 GABRB3P28472 473 aa13.55□□□□□ -0.24
MCF2L-213ENST00000421756 SERPINB8P50452 374 aa13.55□□□□□ -0.24
MCF2L-213ENST00000421756 PAPOLAP51003 745 aaKnown RBP13.55□□□□□ -0.24
MCF2L-213ENST00000421756 POLE2P56282 527 aa13.55□□□□□ -0.24
MCF2L-213ENST00000421756 TSPY1Q01534 308 aa13.55□□□□□ -0.24
MCF2L-213ENST00000421756 KCNA10Q16322 511 aa13.55□□□□□ -0.24
MCF2L-213ENST00000421756 RAP1GAP2Q684P5 730 aa13.55□□□□□ -0.24
MCF2L-213ENST00000421756 CCNJLQ8IV13 435 aa13.55□□□□□ -0.24
MCF2L-213ENST00000421756 RTP3Q9BQQ7 232 aa13.55□□□□□ -0.24
MCF2L-213ENST00000421756 CNGB3Q9NQW8 809 aa13.55□□□□□ -0.24
MCF2L-213ENST00000421756 ZDHHC2Q9UIJ5 367 aa13.55□□□□□ -0.24
MCF2L-213ENST00000421756 TRIM13O60858 407 aa13.55□□□□□ -0.24
MCF2L-213ENST00000421756 HLA-DQB2P05538 268 aa13.55□□□□□ -0.24
MCF2L-213ENST00000421756 CA8P35219 290 aa13.55□□□□□ -0.24
MCF2L-213ENST00000421756 RGS2P41220 211 aa13.55□□□□□ -0.24
MCF2L-213ENST00000421756 GLUD2P49448 558 aa13.55□□□□□ -0.24
MCF2L-213ENST00000421756 TAS2R39P59534 338 aa13.55□□□□□ -0.24
MCF2L-213ENST00000421756 DSC2Q02487 901 aa13.55□□□□□ -0.24
MCF2L-213ENST00000421756 YWHAHQ04917 246 aaPredicted RBP13.55□□□□□ -0.24
MCF2L-213ENST00000421756 CDH17Q12864 832 aa13.55□□□□□ -0.24
MCF2L-213ENST00000421756 PTPRRQ15256 657 aa13.55□□□□□ -0.24
MCF2L-213ENST00000421756 MGAT5BQ3V5L5 792 aa13.55□□□□□ -0.24
MCF2L-213ENST00000421756 FAM117BQ6P1L5 589 aa13.55□□□□□ -0.24
MCF2L-213ENST00000421756 TMC7Q7Z402 723 aa13.55□□□□□ -0.24
MCF2L-213ENST00000421756 TEKT5Q96M29 485 aa13.55□□□□□ -0.24
MCF2L-213ENST00000421756 NPAS2Q99743 824 aa13.55□□□□□ -0.24
MCF2L-213ENST00000421756 CCDC106Q9BWC9 280 aa13.55□□□□□ -0.24
MCF2L-213ENST00000421756 TRIM8Q9BZR9 551 aa13.55□□□□□ -0.24
MCF2L-213ENST00000421756 PIDD1Q9HB75 910 aa13.55□□□□□ -0.24
MCF2L-213ENST00000421756 DMAP1Q9NPF5 467 aaPredicted RBP13.55□□□□□ -0.24
MCF2L-213ENST00000421756 TCF7L2Q9NQB0 619 aa13.55□□□□□ -0.24
MCF2L-213ENST00000421756 LNPEPQ9UIQ6 1025 aa13.55□□□□□ -0.24
MCF2L-213ENST00000421756 SERPINA6P08185 405 aa13.54□□□□□ -0.24
MCF2L-213ENST00000421756 ODC1P11926 461 aa13.54□□□□□ -0.24
MCF2L-213ENST00000421756 AKR1A1P14550 325 aa13.54□□□□□ -0.24
MCF2L-213ENST00000421756 ANPEPP15144 967 aa13.54□□□□□ -0.24
MCF2L-213ENST00000421756 CCND3P30281 292 aaPredicted RBP13.54□□□□□ -0.24
MCF2L-213ENST00000421756 SH2D4BQ5SQS7 431 aa13.54□□□□□ -0.24
MCF2L-213ENST00000421756 ITPRIPL1Q6GPH6 555 aa13.54□□□□□ -0.24
MCF2L-213ENST00000421756 RPAINQ86UA6 219 aa13.54□□□□□ -0.24
MCF2L-213ENST00000421756 PIM3Q86V86 326 aa13.54□□□□□ -0.24
MCF2L-213ENST00000421756 OR52K2Q8NGK3 314 aa13.54□□□□□ -0.24
MCF2L-213ENST00000421756 ZNF398Q8TD17 642 aa13.54□□□□□ -0.24
MCF2L-213ENST00000421756 SH3RF2Q8TEC5 729 aa13.54□□□□□ -0.24
MCF2L-213ENST00000421756 TRIB2Q92519 343 aa13.54□□□□□ -0.24
MCF2L-213ENST00000421756 CDRT15Q96T59 188 aa13.54□□□□□ -0.24
MCF2L-213ENST00000421756 PRM3Q9NNZ6 103 aa13.54□□□□□ -0.24
MCF2L-213ENST00000421756 ADA2Q9NZK5 511 aa13.54□□□□□ -0.24
MCF2L-213ENST00000421756 IPO11Q9UI26 975 aaKnown RBP13.54□□□□□ -0.24
MCF2L-213ENST00000421756 MYO9BQ13459 2157 aa13.54□□□□□ -0.24
MCF2L-213ENST00000421756 FAM95CA0A1B0GW59 222 aa13.54□□□□□ -0.24
MCF2L-213ENST00000421756 SMIM24O75264 130 aa13.54□□□□□ -0.24
MCF2L-213ENST00000421756 SNNO75324 88 aaPredicted RBP13.54□□□□□ -0.24
MCF2L-213ENST00000421756 TSHRP16473 764 aa13.54□□□□□ -0.24
MCF2L-213ENST00000421756 SP100P23497 879 aaPredicted RBP13.54□□□□□ -0.24
MCF2L-213ENST00000421756 CCR1P32246 355 aa13.54□□□□□ -0.24
MCF2L-213ENST00000421756 CCNFP41002 786 aa13.54□□□□□ -0.24
MCF2L-213ENST00000421756 LIMK2P53671 638 aa13.54□□□□□ -0.24
MCF2L-213ENST00000421756 USP46P62068 366 aa13.54□□□□□ -0.24
MCF2L-213ENST00000421756 MRPS22P82650 360 aaKnown RBP13.54□□□□□ -0.24
MCF2L-213ENST00000421756 PITRM1Q5JRX3 1037 aa13.54□□□□□ -0.24
MCF2L-213ENST00000421756 ESAMQ96AP7 390 aa13.54□□□□□ -0.24
MCF2L-213ENST00000421756 SLC38A7Q9NVC3 462 aa13.54□□□□□ -0.24
MCF2L-213ENST00000421756 OSER1Q9NX31 292 aa13.54□□□□□ -0.24
MCF2L-213ENST00000421756 UBA6A0AVT1 1052 aaPredicted RBP13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms