RNA–Protein interactions for RNA: ENST00000418258.5

PTCH1-205, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,815 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-205ENST00000418258 ZC3H12AQ5D1E8 599 aaKnown RBP11.36□□□□□ -0.59
PTCH1-205ENST00000418258 TNS2Q63HR2 1409 aa11.36□□□□□ -0.59
PTCH1-205ENST00000418258 ZNF57Q68EA5 555 aaPredicted RBP11.36□□□□□ -0.59
PTCH1-205ENST00000418258 FAM220AQ7Z4H9 259 aa11.36□□□□□ -0.59
PTCH1-205ENST00000418258 ZC3H7AQ8IWR0 971 aaKnown RBP11.36□□□□□ -0.59
PTCH1-205ENST00000418258 DDHD1Q8NEL9 900 aa11.36□□□□□ -0.59
PTCH1-205ENST00000418258 ZNF671Q8TAW3 534 aa11.36□□□□□ -0.59
PTCH1-205ENST00000418258 ZYG11BQ9C0D3 744 aa11.36□□□□□ -0.59
PTCH1-205ENST00000418258 ATAD3AQ9NVI7 634 aa11.36□□□□□ -0.59
PTCH1-205ENST00000418258 ZNF780BQ9Y6R6 833 aa11.36□□□□□ -0.59
PTCH1-205ENST00000418258 RIMBP3CA6NJZ7 1639 aa11.36□□□□□ -0.59
PTCH1-205ENST00000418258 RIMBP3BA6NNM3 1639 aa11.36□□□□□ -0.59
PTCH1-205ENST00000418258 RIMBP3Q9UFD9 1639 aa11.36□□□□□ -0.59
PTCH1-205ENST00000418258 AVILO75366 819 aa11.36□□□□□ -0.59
PTCH1-205ENST00000418258 TSPAN19P0C672 248 aa11.36□□□□□ -0.59
PTCH1-205ENST00000418258 POLD2P49005 469 aa11.36□□□□□ -0.59
PTCH1-205ENST00000418258 PSEN1P49768 467 aa11.36□□□□□ -0.59
PTCH1-205ENST00000418258 HK2P52789 917 aa11.36□□□□□ -0.59
PTCH1-205ENST00000418258 ZNF697Q5TEC3 545 aa11.36□□□□□ -0.59
PTCH1-205ENST00000418258 RPTNQ6XPR3 784 aa11.36□□□□□ -0.59
PTCH1-205ENST00000418258 PEG10Q86TG7 708 aaKnown RBP11.36□□□□□ -0.59
PTCH1-205ENST00000418258 VCPIP1Q96JH7 1222 aa11.36□□□□□ -0.59
PTCH1-205ENST00000418258 C6orf62Q9GZU0 229 aaPredicted RBP11.36□□□□□ -0.59
PTCH1-205ENST00000418258 CROTQ9UKG9 612 aa11.36□□□□□ -0.59
PTCH1-205ENST00000418258 GCATO75600 419 aa11.35□□□□□ -0.59
PTCH1-205ENST00000418258 ANXA6P08133 673 aa11.35□□□□□ -0.59
PTCH1-205ENST00000418258 CSH1P0DML2 217 aa11.35□□□□□ -0.59
PTCH1-205ENST00000418258 CSH2P0DML3 217 aa11.35□□□□□ -0.59
PTCH1-205ENST00000418258 MAB21L3Q8N8X9 362 aa11.35□□□□□ -0.59
PTCH1-205ENST00000418258 MCCC1Q96RQ3 725 aaPredicted RBP11.35□□□□□ -0.59
PTCH1-205ENST00000418258 TBCBQ99426 244 aa11.35□□□□□ -0.59
PTCH1-205ENST00000418258 FAIM2Q9BWQ8 316 aa11.35□□□□□ -0.59
PTCH1-205ENST00000418258 ZNF624Q9P2J8 865 aaPredicted RBP11.35□□□□□ -0.59
PTCH1-205ENST00000418258 CAPN6Q9Y6Q1 641 aa11.35□□□□□ -0.59
PTCH1-205ENST00000418258 KIAA1210Q9ULL0 1709 aa11.35□□□□□ -0.59
PTCH1-205ENST00000418258 ENO4A6NNW6 628 aa11.35□□□□□ -0.59
PTCH1-205ENST00000418258 NEDD8-MDP1E9PL57 170 aa11.35□□□□□ -0.59
PTCH1-205ENST00000418258 PPM1AP35813 382 aa11.35□□□□□ -0.59
PTCH1-205ENST00000418258 IRAK1P51617 712 aa11.35□□□□□ -0.59
PTCH1-205ENST00000418258 LYPLAL1Q5VWZ2 237 aa11.35□□□□□ -0.59
PTCH1-205ENST00000418258 PLEKHA7Q6IQ23 1121 aa11.35□□□□□ -0.59
PTCH1-205ENST00000418258 SLC41A1Q8IVJ1 513 aa11.35□□□□□ -0.59
PTCH1-205ENST00000418258 HES2Q9Y543 173 aa11.35□□□□□ -0.59
PTCH1-205ENST00000418258 CACNB4O00305 520 aaPredicted RBP11.35□□□□□ -0.59
PTCH1-205ENST00000418258 KIAA0319LQ8IZA0 1049 aa11.35□□□□□ -0.59
PTCH1-205ENST00000418258 ZNF248Q8NDW4 579 aa11.35□□□□□ -0.59
PTCH1-205ENST00000418258 ACTRT2Q8TDY3 377 aa11.35□□□□□ -0.59
PTCH1-205ENST00000418258 OR8D1Q8WZ84 308 aa11.35□□□□□ -0.59
PTCH1-205ENST00000418258 RIBC2Q9H4K1 309 aa11.35□□□□□ -0.59
PTCH1-205ENST00000418258 SEMA4BQ9NPR2 832 aaPredicted RBP11.35□□□□□ -0.59
PTCH1-205ENST00000418258 VPS45Q9NRW7 570 aa11.35□□□□□ -0.59
PTCH1-205ENST00000418258 C1orf232A0A0U1RR37 186 aa11.35□□□□□ -0.59
PTCH1-205ENST00000418258 IRF6O14896 467 aa11.35□□□□□ -0.59
PTCH1-205ENST00000418258 MYBL2P10244 700 aa11.35□□□□□ -0.59
PTCH1-205ENST00000418258 PTPRAP18433 802 aa11.35□□□□□ -0.59
PTCH1-205ENST00000418258 PMF1Q6P1K2 205 aa11.35□□□□□ -0.59
PTCH1-205ENST00000418258 GINS4Q9BRT9 223 aa11.35□□□□□ -0.59
PTCH1-205ENST00000418258 PORCNQ9H237 461 aa11.35□□□□□ -0.59
PTCH1-205ENST00000418258 THAP1Q9NVV9 213 aa11.35□□□□□ -0.59
PTCH1-205ENST00000418258 VAV3Q9UKW4 847 aa11.35□□□□□ -0.59
PTCH1-205ENST00000418258 CDH9Q9ULB4 789 aa11.35□□□□□ -0.59
PTCH1-205ENST00000418258 TNPO3Q9Y5L0 923 aaKnown RBP11.35□□□□□ -0.59
PTCH1-205ENST00000418258 RPTORQ8N122 1335 aa11.35□□□□□ -0.59
PTCH1-205ENST00000418258 AP3D1O14617 1153 aa11.35□□□□□ -0.59
PTCH1-205ENST00000418258 MAGEC1O60732 1142 aa11.35□□□□□ -0.59
PTCH1-205ENST00000418258 ABRQ12979 859 aa11.35□□□□□ -0.59
PTCH1-205ENST00000418258 SH3BP5LQ7L8J4 393 aa11.35□□□□□ -0.59
PTCH1-205ENST00000418258 NKX2-3Q8TAU0 364 aa11.35□□□□□ -0.59
PTCH1-205ENST00000418258 GPR152Q8TDT2 470 aa11.35□□□□□ -0.59
PTCH1-205ENST00000418258 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.35□□□□□ -0.59
PTCH1-205ENST00000418258 EFCAB10A6NFE3 127 aa11.35□□□□□ -0.59
PTCH1-205ENST00000418258 ZCCHC18P0CG32 403 aa11.35□□□□□ -0.59
PTCH1-205ENST00000418258 CD52P31358 61 aa11.35□□□□□ -0.59
PTCH1-205ENST00000418258 KLHL17Q6TDP4 642 aa11.35□□□□□ -0.59
PTCH1-205ENST00000418258 SMYD1Q8NB12 490 aa11.35□□□□□ -0.59
PTCH1-205ENST00000418258 ITFG1Q8TB96 612 aa11.35□□□□□ -0.59
PTCH1-205ENST00000418258 ASB2Q96Q27 587 aa11.35□□□□□ -0.59
PTCH1-205ENST00000418258 CNPPD1Q9BV87 410 aa11.35□□□□□ -0.59
PTCH1-205ENST00000418258 PCDH12Q9NPG4 1184 aa11.35□□□□□ -0.59
PTCH1-205ENST00000418258 FARP2O94887 1054 aaPredicted RBP11.34□□□□□ -0.59
PTCH1-205ENST00000418258 NTRK1P04629 796 aa11.34□□□□□ -0.59
PTCH1-205ENST00000418258 ELFN1P0C7U0 828 aa11.34□□□□□ -0.59
PTCH1-205ENST00000418258 ACADSP16219 412 aa11.34□□□□□ -0.59
PTCH1-205ENST00000418258 PSMB4P28070 264 aa11.34□□□□□ -0.59
PTCH1-205ENST00000418258 SSTR1P30872 391 aa11.34□□□□□ -0.59
PTCH1-205ENST00000418258 RPL4P36578 427 aaKnown RBP11.34□□□□□ -0.59
PTCH1-205ENST00000418258 GSTM5P46439 218 aa11.34□□□□□ -0.59
PTCH1-205ENST00000418258 MYBPC2Q14324 1141 aa11.34□□□□□ -0.59
PTCH1-205ENST00000418258 ACAP1Q15027 740 aa11.34□□□□□ -0.59
PTCH1-205ENST00000418258 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.34□□□□□ -0.59
PTCH1-205ENST00000418258 IL17RBQ9NRM6 502 aa11.34□□□□□ -0.59
PTCH1-205ENST00000418258 FAM205AQ6ZU69 1335 aa11.34□□□□□ -0.59
PTCH1-205ENST00000418258 ECDO95905 644 aaPredicted RBP11.34□□□□□ -0.59
PTCH1-205ENST00000418258 PRKAR2AP13861 404 aaKnown RBP11.34□□□□□ -0.59
PTCH1-205ENST00000418258 CCNB1P14635 433 aa11.34□□□□□ -0.59
PTCH1-205ENST00000418258 TTPAP49638 278 aa11.34□□□□□ -0.59
PTCH1-205ENST00000418258 FAM187BQ17R55 369 aa11.34□□□□□ -0.59
PTCH1-205ENST00000418258 HEATR4Q86WZ0 1026 aa11.34□□□□□ -0.59
PTCH1-205ENST00000418258 COPS5Q92905 334 aa11.34□□□□□ -0.59
PTCH1-205ENST00000418258 HIPK3Q9H422 1215 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms