RNA–Protein interactions for RNA: ENST00000416769.2

LINC00339-202, long intergenic non-protein coding RNA 339, humanhuman

TSL 1 (best) BASIC

Gene LINC00339, Length 1,077 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-202ENST00000416769 KLHDC7AQ5VTJ3 777 aa13.23□□□□□ -0.29
LINC00339-202ENST00000416769 SMYD5Q6GMV2 418 aa13.23□□□□□ -0.29
LINC00339-202ENST00000416769 OR6B2Q6IFH4 312 aa13.23□□□□□ -0.29
LINC00339-202ENST00000416769 TRIM65Q6PJ69 517 aa13.23□□□□□ -0.29
LINC00339-202ENST00000416769 LINGO4Q6UY18 593 aa13.23□□□□□ -0.29
LINC00339-202ENST00000416769 GCNT7Q6ZNI0 430 aa13.23□□□□□ -0.29
LINC00339-202ENST00000416769 GPR155Q7Z3F1 870 aa13.23□□□□□ -0.29
LINC00339-202ENST00000416769 MRFAP1L1Q96HT8 127 aa13.23□□□□□ -0.29
LINC00339-202ENST00000416769 RPRD1AQ96P16 312 aaPredicted RBP13.23□□□□□ -0.29
LINC00339-202ENST00000416769 CPXM1Q96SM3 734 aa13.23□□□□□ -0.29
LINC00339-202ENST00000416769 FEM1AQ9BSK4 669 aa13.23□□□□□ -0.29
LINC00339-202ENST00000416769 OSBPL2Q9H1P3 480 aa13.23□□□□□ -0.29
LINC00339-202ENST00000416769 POPDC2Q9HBU9 364 aa13.23□□□□□ -0.29
LINC00339-202ENST00000416769 DDIT4Q9NX09 232 aa13.23□□□□□ -0.29
LINC00339-202ENST00000416769 ZFR2Q9UPR6 939 aaKnown RBP13.23□□□□□ -0.29
LINC00339-202ENST00000416769 CNTN6Q9UQ52 1028 aa13.23□□□□□ -0.29
LINC00339-202ENST00000416769 ACTL7AQ9Y615 435 aa13.23□□□□□ -0.29
LINC00339-202ENST00000416769 HS3ST4Q9Y661 456 aa13.23□□□□□ -0.29
LINC00339-202ENST00000416769 TCAF2A6NFQ2 919 aa13.22□□□□□ -0.29
LINC00339-202ENST00000416769 THAP12O43422 761 aa13.22□□□□□ -0.29
LINC00339-202ENST00000416769 ENDOD1O94919 500 aa13.22□□□□□ -0.29
LINC00339-202ENST00000416769 SRCP12931 536 aa13.22□□□□□ -0.29
LINC00339-202ENST00000416769 RRM1P23921 792 aa13.22□□□□□ -0.29
LINC00339-202ENST00000416769 PLK1P53350 603 aa13.22□□□□□ -0.29
LINC00339-202ENST00000416769 YWHAZP63104 245 aaKnown RBP13.22□□□□□ -0.29
LINC00339-202ENST00000416769 DAB2P98082 770 aa13.22□□□□□ -0.29
LINC00339-202ENST00000416769 GCNT1Q02742 428 aa13.22□□□□□ -0.29
LINC00339-202ENST00000416769 SFSWAPQ12872 951 aaKnown RBP13.22□□□□□ -0.29
LINC00339-202ENST00000416769 NME3Q13232 169 aa13.22□□□□□ -0.29
LINC00339-202ENST00000416769 FGL2Q14314 439 aa13.22□□□□□ -0.29
LINC00339-202ENST00000416769 DRAP1Q14919 205 aaPredicted RBP13.22□□□□□ -0.29
LINC00339-202ENST00000416769 STILQ15468 1287 aa13.22□□□□□ -0.29
LINC00339-202ENST00000416769 ZNF284Q2VY69 593 aa13.22□□□□□ -0.29
LINC00339-202ENST00000416769 ARTNQ5T4W7 220 aa13.22□□□□□ -0.29
LINC00339-202ENST00000416769 CDCP2Q5VXM1 449 aa13.22□□□□□ -0.29
LINC00339-202ENST00000416769 TMEM110Q86TL2 294 aa13.22□□□□□ -0.29
LINC00339-202ENST00000416769 SH2D3CQ8N5H7 860 aa13.22□□□□□ -0.29
LINC00339-202ENST00000416769 NEK11Q8NG66 645 aa13.22□□□□□ -0.29
LINC00339-202ENST00000416769 OR4C6Q8NH72 309 aa13.22□□□□□ -0.29
LINC00339-202ENST00000416769 ZNF606Q8WXB4 792 aa13.22□□□□□ -0.29
LINC00339-202ENST00000416769 BAP1Q92560 729 aa13.22□□□□□ -0.29
LINC00339-202ENST00000416769 KLHDC7BQ96G42 594 aa13.22□□□□□ -0.29
LINC00339-202ENST00000416769 PCMTD1Q96MG8 357 aaPredicted RBP13.22□□□□□ -0.29
LINC00339-202ENST00000416769 SLC2A13Q96QE2 648 aa13.22□□□□□ -0.29
LINC00339-202ENST00000416769 CALN1Q9BXU9 219 aa13.22□□□□□ -0.29
LINC00339-202ENST00000416769 TNKS2Q9H2K2 1166 aa13.22□□□□□ -0.29
LINC00339-202ENST00000416769 SIX2Q9NPC8 291 aa13.22□□□□□ -0.29
LINC00339-202ENST00000416769 APEX2Q9UBZ4 518 aa13.22□□□□□ -0.29
LINC00339-202ENST00000416769 VPS28Q9UK41 221 aa13.22□□□□□ -0.29
LINC00339-202ENST00000416769 A0A0D9SEW6 157 aa13.21□□□□□ -0.29
LINC00339-202ENST00000416769 PRAMEF26H0Y7S4 382 aa13.21□□□□□ -0.29
LINC00339-202ENST00000416769 KPNA3O00505 521 aaPredicted RBP13.21□□□□□ -0.29
LINC00339-202ENST00000416769 MCF2LO15068 1137 aa13.21□□□□□ -0.29
LINC00339-202ENST00000416769 RAD51BO15315 384 aa13.21□□□□□ -0.29
LINC00339-202ENST00000416769 SLC7A4O43246 635 aa13.21□□□□□ -0.29
LINC00339-202ENST00000416769 OPA1O60313 960 aa13.21□□□□□ -0.29
LINC00339-202ENST00000416769 PAGE1O75459 146 aa13.21□□□□□ -0.29
LINC00339-202ENST00000416769 PIAS2O75928 621 aa13.21□□□□□ -0.29
LINC00339-202ENST00000416769 ADCY5O95622 1261 aa13.21□□□□□ -0.29
LINC00339-202ENST00000416769 ERBB2P04626 1255 aa13.21□□□□□ -0.29
LINC00339-202ENST00000416769 PNMA6AP0CW24 399 aaPredicted RBP13.21□□□□□ -0.29
LINC00339-202ENST00000416769 KLK7P49862 253 aa13.21□□□□□ -0.29
LINC00339-202ENST00000416769 GABREP78334 506 aa13.21□□□□□ -0.29
LINC00339-202ENST00000416769 ZNF211Q13398 564 aaPredicted RBP13.21□□□□□ -0.29
LINC00339-202ENST00000416769 ILKQ13418 452 aa13.21□□□□□ -0.29
LINC00339-202ENST00000416769 SETMARQ53H47 684 aaPredicted RBP13.21□□□□□ -0.29
LINC00339-202ENST00000416769 FIGNQ5HY92 759 aa13.21□□□□□ -0.29
LINC00339-202ENST00000416769 ARHGAP40Q5TG30 622 aa13.21□□□□□ -0.29
LINC00339-202ENST00000416769 CRTC1Q6UUV9 634 aa13.21□□□□□ -0.29
LINC00339-202ENST00000416769 FAM183BPQ6ZVS7 135 aa13.21□□□□□ -0.29
LINC00339-202ENST00000416769 BEND5Q7L4P6 421 aa13.21□□□□□ -0.29
LINC00339-202ENST00000416769 ENOSF1Q7L5Y1 443 aa13.21□□□□□ -0.29
LINC00339-202ENST00000416769 IQCHQ86VS3 1027 aa13.21□□□□□ -0.29
LINC00339-202ENST00000416769 VSTM4Q8IW00 320 aa13.21□□□□□ -0.29
LINC00339-202ENST00000416769 OXR1Q8N573 874 aa13.21□□□□□ -0.29
LINC00339-202ENST00000416769 ATP6V0D2Q8N8Y2 350 aa13.21□□□□□ -0.29
LINC00339-202ENST00000416769 OR2A12Q8NGT7 310 aa13.21□□□□□ -0.29
LINC00339-202ENST00000416769 GRIN3AQ8TCU5 1115 aa13.21□□□□□ -0.29
LINC00339-202ENST00000416769 COL26A1Q96A83 441 aa13.21□□□□□ -0.29
LINC00339-202ENST00000416769 IQCDQ96DY2 449 aa13.21□□□□□ -0.29
LINC00339-202ENST00000416769 HIC2Q96JB3 615 aa13.21□□□□□ -0.29
LINC00339-202ENST00000416769 APOLD1Q96LR9 279 aa13.21□□□□□ -0.29
LINC00339-202ENST00000416769 LGMNQ99538 433 aa13.21□□□□□ -0.29
LINC00339-202ENST00000416769 EDEM3Q9BZQ6 932 aa13.21□□□□□ -0.29
LINC00339-202ENST00000416769 UBE2TQ9NPD8 197 aaPredicted RBP13.21□□□□□ -0.29
LINC00339-202ENST00000416769 KLF15Q9UIH9 416 aa13.21□□□□□ -0.29
LINC00339-202ENST00000416769 SLC25A13Q9UJS0 675 aa13.21□□□□□ -0.29
LINC00339-202ENST00000416769 DMTF1Q9Y222 760 aa13.21□□□□□ -0.29
LINC00339-202ENST00000416769 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.21□□□□□ -0.29
LINC00339-202ENST00000416769 MYO18BQ8IUG5 2567 aa13.2□□□□□ -0.3
LINC00339-202ENST00000416769 TK2O00142 265 aa13.2□□□□□ -0.3
LINC00339-202ENST00000416769 SART1O43290 800 aaKnown RBP13.2□□□□□ -0.3
LINC00339-202ENST00000416769 USP12O75317 370 aa13.2□□□□□ -0.3
LINC00339-202ENST00000416769 CSO75390 466 aaKnown RBP13.2□□□□□ -0.3
LINC00339-202ENST00000416769 CDK4P11802 303 aa13.2□□□□□ -0.3
LINC00339-202ENST00000416769 UCHL3P15374 230 aa13.2□□□□□ -0.3
LINC00339-202ENST00000416769 GNA15P30679 374 aa13.2□□□□□ -0.3
LINC00339-202ENST00000416769 CHRNA3P32297 505 aa13.2□□□□□ -0.3
LINC00339-202ENST00000416769 ACTN2P35609 894 aa13.2□□□□□ -0.3
LINC00339-202ENST00000416769 NNMTP40261 264 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms