RNA–Protein interactions for RNA: ENST00000401447.1

RPA3-203, Transcript of replication protein A3, humanhuman

TSL 3 BASIC

Gene RPA3, Length 414 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3-203ENST00000401447 TBC1D3IA0A087WXS9 549 aa3.94□□□□□ -1.78
RPA3-203ENST00000401447 TBC1D3EA0A087X179 549 aa3.94□□□□□ -1.78
RPA3-203ENST00000401447 TBC1D3KA0A087X1G2 549 aa3.94□□□□□ -1.78
RPA3-203ENST00000401447 LOC105369274A0A096LPK9 316 aa3.94□□□□□ -1.78
RPA3-203ENST00000401447 LOC102723532A0A0G2JNH3 316 aa3.94□□□□□ -1.78
RPA3-203ENST00000401447 TBC1D3BA6NDS4 549 aa3.94□□□□□ -1.78
RPA3-203ENST00000401447 TBC1D3FA6NER0 549 aaPredicted RBP3.94□□□□□ -1.78
RPA3-203ENST00000401447 TBC1D3LB9A6J9 549 aa3.94□□□□□ -1.78
RPA3-203ENST00000401447 NPHP1O15259 732 aa3.94□□□□□ -1.78
RPA3-203ENST00000401447 TLR2O60603 784 aa3.94□□□□□ -1.78
RPA3-203ENST00000401447 CNTN5O94779 1100 aa3.94□□□□□ -1.78
RPA3-203ENST00000401447 SGPL1O95470 568 aa3.94□□□□□ -1.78
RPA3-203ENST00000401447 HSP90AB1P08238 724 aaKnown RBP3.94□□□□□ -1.78
RPA3-203ENST00000401447 TMEM191BP0C7N4 346 aa3.94□□□□□ -1.78
RPA3-203ENST00000401447 TBC1D3HP0C7X1 549 aa3.94□□□□□ -1.78
RPA3-203ENST00000401447 TGM2P21980 687 aa3.94□□□□□ -1.78
RPA3-203ENST00000401447 SOX2P48431 317 aa3.94□□□□□ -1.78
RPA3-203ENST00000401447 GMPSP49915 693 aaPredicted RBP3.94□□□□□ -1.78
RPA3-203ENST00000401447 CCT4P50991 539 aaKnown RBP3.94□□□□□ -1.78
RPA3-203ENST00000401447 ZNF84P51523 738 aa3.94□□□□□ -1.78
RPA3-203ENST00000401447 POLE2P56282 527 aa3.94□□□□□ -1.78
RPA3-203ENST00000401447 SLC37A1P57057 533 aa3.94□□□□□ -1.78
RPA3-203ENST00000401447 LAMB3Q13751 1172 aa3.94□□□□□ -1.78
RPA3-203ENST00000401447 BLMHQ13867 455 aa3.94□□□□□ -1.78
RPA3-203ENST00000401447 PTK2BQ14289 1009 aa3.94□□□□□ -1.78
RPA3-203ENST00000401447 ARHGEF6Q15052 776 aa3.94□□□□□ -1.78
RPA3-203ENST00000401447 BTBD16Q32M84 506 aa3.94□□□□□ -1.78
RPA3-203ENST00000401447 EPHA10Q5JZY3 1008 aa3.94□□□□□ -1.78
RPA3-203ENST00000401447 TBC1D3GQ6DHY5 549 aa3.94□□□□□ -1.78
RPA3-203ENST00000401447 TBC1D3CQ6IPX1 549 aa3.94□□□□□ -1.78
RPA3-203ENST00000401447 TMEM88Q6PEY1 159 aa3.94□□□□□ -1.78
RPA3-203ENST00000401447 KLHL17Q6TDP4 642 aa3.94□□□□□ -1.78
RPA3-203ENST00000401447 RINLQ6ZS11 566 aa3.94□□□□□ -1.78
RPA3-203ENST00000401447 RAB11FIP2Q7L804 512 aa3.94□□□□□ -1.78
RPA3-203ENST00000401447 RHPN2Q8IUC4 686 aa3.94□□□□□ -1.78
RPA3-203ENST00000401447 TBC1D3Q8IZP1 549 aaPredicted RBP3.94□□□□□ -1.78
RPA3-203ENST00000401447 OR4N4Q8N0Y3 316 aa3.94□□□□□ -1.78
RPA3-203ENST00000401447 CNBD1Q8NA66 436 aa3.94□□□□□ -1.78
RPA3-203ENST00000401447 FAM47BQ8NA70 645 aa3.94□□□□□ -1.78
RPA3-203ENST00000401447 ATG16L2Q8NAA4 619 aa3.94□□□□□ -1.78
RPA3-203ENST00000401447 POF1BQ8WVV4 589 aa3.94□□□□□ -1.78
RPA3-203ENST00000401447 HMGB4Q8WW32 186 aa3.94□□□□□ -1.78
RPA3-203ENST00000401447 RSC1A1Q92681 617 aa3.94□□□□□ -1.78
RPA3-203ENST00000401447 DCPSQ96C86 337 aaKnown RBP3.94□□□□□ -1.78
RPA3-203ENST00000401447 MCRS1Q96EZ8 462 aa3.94□□□□□ -1.78
RPA3-203ENST00000401447 GUCD1Q96NT3 240 aa3.94□□□□□ -1.78
RPA3-203ENST00000401447 RMDN3Q96TC7 470 aa3.94□□□□□ -1.78
RPA3-203ENST00000401447 TRMOQ9BU70 441 aa3.94□□□□□ -1.78
RPA3-203ENST00000401447 VPS33BQ9H267 617 aa3.94□□□□□ -1.78
RPA3-203ENST00000401447 LRFN1Q9P244 771 aa3.94□□□□□ -1.78
RPA3-203ENST00000401447 MON2Q7Z3U7 1717 aa3.94□□□□□ -1.78
RPA3-203ENST00000401447 CACNA1BQ00975 2339 aa3.94□□□□□ -1.78
RPA3-203ENST00000401447 CACNA1SQ13698 1873 aa3.94□□□□□ -1.78
RPA3-203ENST00000401447 MRC1P22897 1456 aa3.93□□□□□ -1.78
RPA3-203ENST00000401447 A0A1W2PP64 1363 aa3.93□□□□□ -1.78
RPA3-203ENST00000401447 TONSLQ96HA7 1378 aa3.93□□□□□ -1.78
RPA3-203ENST00000401447 NPC1L1Q9UHC9 1359 aa3.93□□□□□ -1.78
RPA3-203ENST00000401447 POLR2AP24928 1970 aaKnown RBP3.93□□□□□ -1.78
RPA3-203ENST00000401447 DPPA5A6NC42 116 aa3.93□□□□□ -1.78
RPA3-203ENST00000401447 EFCAB8A8MWE9 144 aa3.93□□□□□ -1.78
RPA3-203ENST00000401447 M0QYT0 321 aa3.93□□□□□ -1.78
RPA3-203ENST00000401447 ACKR2O00590 384 aa3.93□□□□□ -1.78
RPA3-203ENST00000401447 TRIM38O00635 465 aa3.93□□□□□ -1.78
RPA3-203ENST00000401447 PPP6R2O75170 966 aa3.93□□□□□ -1.78
RPA3-203ENST00000401447 CNOT3O75175 753 aaKnown RBP3.93□□□□□ -1.78
RPA3-203ENST00000401447 PRF1P14222 555 aa3.93□□□□□ -1.78
RPA3-203ENST00000401447 PDIA3P30101 505 aaKnown RBP3.93□□□□□ -1.78
RPA3-203ENST00000401447 CHAF1AQ13111 956 aaPredicted RBP3.93□□□□□ -1.78
RPA3-203ENST00000401447 TBC1D9BQ66K14 1250 aa3.93□□□□□ -1.78
RPA3-203ENST00000401447 NFRKBQ6P4R8 1299 aa3.93□□□□□ -1.78
RPA3-203ENST00000401447 SPICE1Q8N0Z3 855 aa3.93□□□□□ -1.78
RPA3-203ENST00000401447 MPLKIPQ8TAP9 179 aa3.93□□□□□ -1.78
RPA3-203ENST00000401447 COG3Q96JB2 828 aa3.93□□□□□ -1.78
RPA3-203ENST00000401447 ZNF48Q96MX3 618 aaPredicted RBP3.93□□□□□ -1.78
RPA3-203ENST00000401447 BRD8Q9H0E9 1235 aa3.93□□□□□ -1.78
RPA3-203ENST00000401447 SFXN1Q9H9B4 322 aa3.93□□□□□ -1.78
RPA3-203ENST00000401447 MOV10Q9HCE1 1003 aaKnown RBP3.93□□□□□ -1.78
RPA3-203ENST00000401447 LIN7CQ9NUP9 197 aaKnown RBP3.93□□□□□ -1.78
RPA3-203ENST00000401447 DACT1Q9NYF0 836 aa3.93□□□□□ -1.78
RPA3-203ENST00000401447 TAGLN3Q9UI15 199 aa3.93□□□□□ -1.78
RPA3-203ENST00000401447 HERC5Q9UII4 1024 aaKnown RBP3.93□□□□□ -1.78
RPA3-203ENST00000401447 RAB21Q9UL25 225 aa3.93□□□□□ -1.78
RPA3-203ENST00000401447 CNTN6Q9UQ52 1028 aa3.93□□□□□ -1.78
RPA3-203ENST00000401447 ZBTB1Q9Y2K1 713 aa3.93□□□□□ -1.78
RPA3-203ENST00000401447 EDC4Q6P2E9 1401 aaKnown RBP3.93□□□□□ -1.78
RPA3-203ENST00000401447 BAHCC1Q9P281 2608 aa3.92□□□□□ -1.78
RPA3-203ENST00000401447 MBD3L5A6NJ08 208 aaPredicted RBP3.92□□□□□ -1.78
RPA3-203ENST00000401447 SLC38A8A6NNN8 435 aa3.92□□□□□ -1.78
RPA3-203ENST00000401447 UGDHO60701 494 aa3.92□□□□□ -1.78
RPA3-203ENST00000401447 ACTL6BO94805 426 aa3.92□□□□□ -1.78
RPA3-203ENST00000401447 CSTBP04080 98 aaKnown RBP3.92□□□□□ -1.78
RPA3-203ENST00000401447 IGKV2-30P06310 120 aa3.92□□□□□ -1.78
RPA3-203ENST00000401447 RFPL3SP0C7P2 107 aa3.92□□□□□ -1.78
RPA3-203ENST00000401447 CAPN2P17655 700 aa3.92□□□□□ -1.78
RPA3-203ENST00000401447 SCP2P22307 547 aa3.92□□□□□ -1.78
RPA3-203ENST00000401447 ME1P48163 572 aa3.92□□□□□ -1.78
RPA3-203ENST00000401447 RHBDL3P58872 404 aa3.92□□□□□ -1.78
RPA3-203ENST00000401447 RPL15P61313 204 aaKnown RBP3.92□□□□□ -1.78
RPA3-203ENST00000401447 AP2B1P63010 937 aa3.92□□□□□ -1.78
RPA3-203ENST00000401447 B4GALNT1Q00973 533 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms