RNA–Protein interactions for RNA: ENST00000397443.6

CPNE1-204, Transcript of copine 1, humanhuman

APPRIS P1 TSL 5

Gene CPNE1, Length 1,928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-204ENST00000397443 DCAF4L2Q8NA75 395 aa21.57■■□□□ 1.04
CPNE1-204ENST00000397443 BBOF1Q8ND07 529 aa21.57■■□□□ 1.04
CPNE1-204ENST00000397443 FMO2Q99518 471 aa21.57■■□□□ 1.04
CPNE1-204ENST00000397443 C2orf49Q9BVC5 232 aaPredicted RBP21.57■■□□□ 1.04
CPNE1-204ENST00000397443 GBA3Q9H227 469 aa21.57■■□□□ 1.04
CPNE1-204ENST00000397443 DYNC1I1O14576 645 aa21.57■■□□□ 1.04
CPNE1-204ENST00000397443 ZNF189O75820 626 aaPredicted RBP21.57■■□□□ 1.04
CPNE1-204ENST00000397443 ZMPSTE24O75844 475 aa21.57■■□□□ 1.04
CPNE1-204ENST00000397443 TMEM63AO94886 807 aa21.57■■□□□ 1.04
CPNE1-204ENST00000397443 MT-CO1P00395 513 aa21.57■■□□□ 1.04
CPNE1-204ENST00000397443 PABPC1P11940 636 aaKnown RBP21.57■■□□□ 1.04
CPNE1-204ENST00000397443 CTSOP43234 321 aaPredicted RBP21.57■■□□□ 1.04
CPNE1-204ENST00000397443 SLC6A11P48066 632 aa21.57■■□□□ 1.04
CPNE1-204ENST00000397443 HTR4Q13639 388 aa21.57■■□□□ 1.04
CPNE1-204ENST00000397443 BRD3Q15059 726 aa21.57■■□□□ 1.04
CPNE1-204ENST00000397443 PARP6Q2NL67 630 aa21.57■■□□□ 1.04
CPNE1-204ENST00000397443 NAIF1Q69YI7 327 aaPredicted RBP21.57■■□□□ 1.04
CPNE1-204ENST00000397443 RNF135Q8IUD6 432 aa21.57■■□□□ 1.04
CPNE1-204ENST00000397443 KIAA1958Q8N8K9 716 aa21.57■■□□□ 1.04
CPNE1-204ENST00000397443 TSEN2Q8NCE0 465 aaKnown RBP21.57■■□□□ 1.04
CPNE1-204ENST00000397443 SPATA22Q8NHS9 363 aa21.57■■□□□ 1.04
CPNE1-204ENST00000397443 EXOC2Q96KP1 924 aa21.57■■□□□ 1.04
CPNE1-204ENST00000397443 LMLNQ96KR4 655 aa21.57■■□□□ 1.04
CPNE1-204ENST00000397443 RPL10LQ96L21 214 aaKnown RBP21.57■■□□□ 1.04
CPNE1-204ENST00000397443 XPO6Q96QU8 1125 aaKnown RBP21.57■■□□□ 1.04
CPNE1-204ENST00000397443 ARGLU1Q9NWB6 273 aaPredicted RBP21.57■■□□□ 1.04
CPNE1-204ENST00000397443 FARP1Q9Y4F1 1045 aaPredicted RBP21.57■■□□□ 1.04
CPNE1-204ENST00000397443 KIF26AQ9ULI4 1882 aaPredicted RBP21.56■■□□□ 1.04
CPNE1-204ENST00000397443 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP21.56■■□□□ 1.04
CPNE1-204ENST00000397443 CCDC151A5D8V7 595 aa21.56■■□□□ 1.04
CPNE1-204ENST00000397443 K7ERQ8 282 aa21.56■■□□□ 1.04
CPNE1-204ENST00000397443 HOXC11O43248 304 aaPredicted RBP21.56■■□□□ 1.04
CPNE1-204ENST00000397443 CACNG3O60359 315 aa21.56■■□□□ 1.04
CPNE1-204ENST00000397443 ERLIN1O75477 346 aa21.56■■□□□ 1.04
CPNE1-204ENST00000397443 GJB3O75712 270 aa21.56■■□□□ 1.04
CPNE1-204ENST00000397443 FDFT1P37268 417 aa21.56■■□□□ 1.04
CPNE1-204ENST00000397443 RUNX3Q13761 415 aa21.56■■□□□ 1.04
CPNE1-204ENST00000397443 SPARCL1Q14515 664 aa21.56■■□□□ 1.04
CPNE1-204ENST00000397443 C4orf22Q6V702 233 aa21.56■■□□□ 1.04
CPNE1-204ENST00000397443 PCGF5Q86SE9 256 aa21.56■■□□□ 1.04
CPNE1-204ENST00000397443 PGBD5Q8N414 524 aa21.56■■□□□ 1.04
CPNE1-204ENST00000397443 PDCD7Q8N8D1 485 aaKnown RBP21.56■■□□□ 1.04
CPNE1-204ENST00000397443 PRCCQ92733 491 aaPredicted RBP21.56■■□□□ 1.04
CPNE1-204ENST00000397443 GORASP1Q9BQQ3 440 aa21.56■■□□□ 1.04
CPNE1-204ENST00000397443 CINPQ9BW66 212 aaPredicted RBP21.56■■□□□ 1.04
CPNE1-204ENST00000397443 GLOD4Q9HC38 313 aa21.56■■□□□ 1.04
CPNE1-204ENST00000397443 IGSF9Q9P2J2 1179 aa21.56■■□□□ 1.04
CPNE1-204ENST00000397443 LIMD1Q9UGP4 676 aa21.56■■□□□ 1.04
CPNE1-204ENST00000397443 FCF1Q9Y324 198 aaKnown RBP21.56■■□□□ 1.04
CPNE1-204ENST00000397443 MUSKO15146 869 aa21.55■■□□□ 1.04
CPNE1-204ENST00000397443 TULP3O75386 442 aa21.55■■□□□ 1.04
CPNE1-204ENST00000397443 H2AFXP16104 143 aaPredicted RBP21.55■■□□□ 1.04
CPNE1-204ENST00000397443 DGKGP49619 791 aa21.55■■□□□ 1.04
CPNE1-204ENST00000397443 MESP2Q0VG99 397 aa21.55■■□□□ 1.04
CPNE1-204ENST00000397443 OLIG2Q13516 323 aa21.55■■□□□ 1.04
CPNE1-204ENST00000397443 KCNJ11Q14654 390 aa21.55■■□□□ 1.04
CPNE1-204ENST00000397443 MORF4L2Q15014 288 aa21.55■■□□□ 1.04
CPNE1-204ENST00000397443 AAK1Q2M2I8 961 aa21.55■■□□□ 1.04
CPNE1-204ENST00000397443 CPA6Q8N4T0 437 aa21.55■■□□□ 1.04
CPNE1-204ENST00000397443 NAT8LQ8N9F0 302 aa21.55■■□□□ 1.04
CPNE1-204ENST00000397443 BRD9Q9H8M2 597 aa21.55■■□□□ 1.04
CPNE1-204ENST00000397443 MTRF1LQ9UGC7 380 aaKnown RBP21.55■■□□□ 1.04
CPNE1-204ENST00000397443 CHADO15335 359 aa21.55■■□□□ 1.04
CPNE1-204ENST00000397443 MT-CYBP00156 380 aaPredicted RBP21.55■■□□□ 1.04
CPNE1-204ENST00000397443 TNNT3P45378 269 aaPredicted RBP21.55■■□□□ 1.04
CPNE1-204ENST00000397443 STK19P49842 368 aaPredicted RBP21.55■■□□□ 1.04
CPNE1-204ENST00000397443 TFF2Q03403 129 aa21.55■■□□□ 1.04
CPNE1-204ENST00000397443 KDSRQ06136 332 aa21.55■■□□□ 1.04
CPNE1-204ENST00000397443 GEN1Q17RS7 908 aa21.55■■□□□ 1.04
CPNE1-204ENST00000397443 AENQ8WTP8 325 aaKnown RBP21.55■■□□□ 1.04
CPNE1-204ENST00000397443 ZNF599Q96NL3 588 aa21.55■■□□□ 1.04
CPNE1-204ENST00000397443 RBM15Q96T37 977 aaKnown RBP eCLIP21.55■■□□□ 1.042e-7■■■□□ 15.1
CPNE1-204ENST00000397443 PIH1D1Q9NWS0 290 aaKnown RBP21.55■■□□□ 1.04
CPNE1-204ENST00000397443 TMCC1O94876 653 aa21.54■■□□□ 1.04
CPNE1-204ENST00000397443 CD160O95971 181 aa21.54■■□□□ 1.04
CPNE1-204ENST00000397443 DSC2Q02487 901 aa21.54■■□□□ 1.04
CPNE1-204ENST00000397443 NR1H3Q13133 447 aa21.54■■□□□ 1.04
CPNE1-204ENST00000397443 SEMA5AQ13591 1074 aa21.54■■□□□ 1.04
CPNE1-204ENST00000397443 GAB4Q2WGN9 574 aa21.54■■□□□ 1.04
CPNE1-204ENST00000397443 KDELC2Q7Z4H8 507 aa21.54■■□□□ 1.04
CPNE1-204ENST00000397443 TEX26Q8N6G2 289 aa21.54■■□□□ 1.04
CPNE1-204ENST00000397443 SORCS1Q8WY21 1168 aa21.54■■□□□ 1.04
CPNE1-204ENST00000397443 FATE1Q969F0 183 aa21.54■■□□□ 1.04
CPNE1-204ENST00000397443 EXOC4Q96A65 974 aa21.54■■□□□ 1.04
CPNE1-204ENST00000397443 OXNAD1Q96HP4 312 aaPredicted RBP21.54■■□□□ 1.04
CPNE1-204ENST00000397443 SEPT3Q9UH03 358 aa21.54■■□□□ 1.04
CPNE1-204ENST00000397443 SHOC2Q9UQ13 582 aa21.54■■□□□ 1.04
CPNE1-204ENST00000397443 ANHXE9PGG2 379 aa21.53■■□□□ 1.04
CPNE1-204ENST00000397443 SMAD6O43541 496 aaKnown RBP21.53■■□□□ 1.04
CPNE1-204ENST00000397443 CAV1Q03135 178 aa21.53■■□□□ 1.04
CPNE1-204ENST00000397443 SLC12A1Q13621 1099 aa21.53■■□□□ 1.04
CPNE1-204ENST00000397443 CYTH1Q15438 398 aa21.53■■□□□ 1.04
CPNE1-204ENST00000397443 MAP9Q49MG5 647 aa21.53■■□□□ 1.04
CPNE1-204ENST00000397443 HP1BP3Q5SSJ5 553 aaPredicted RBP21.53■■□□□ 1.04
CPNE1-204ENST00000397443 TMEM215Q68D42 235 aa21.53■■□□□ 1.04
CPNE1-204ENST00000397443 RETSATQ6NUM9 610 aa21.53■■□□□ 1.04
CPNE1-204ENST00000397443 BBS5Q8N3I7 341 aa21.53■■□□□ 1.04
CPNE1-204ENST00000397443 ZNF557Q8N988 423 aaPredicted RBP21.53■■□□□ 1.04
CPNE1-204ENST00000397443 ANKRD7Q92527 254 aa21.53■■□□□ 1.04
CPNE1-204ENST00000397443 ACDQ96AP0 544 aa21.53■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms