RNA–Protein interactions for RNA: ENST00000396352.8

HOXA3-202, Transcript of homeobox A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA3, Length 3,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3-202ENST00000396352 TRHDEQ9UKU6 1024 aa15.97■□□□□ 0.15
HOXA3-202ENST00000396352 PCDHGB4Q9UN71 923 aa15.97■□□□□ 0.15
HOXA3-202ENST00000396352 PCDHGB5Q9Y5G0 923 aa15.97■□□□□ 0.15
HOXA3-202ENST00000396352 CABYRO75952 493 aa15.96■□□□□ 0.15
HOXA3-202ENST00000396352 GABRB3P28472 473 aa15.96■□□□□ 0.15
HOXA3-202ENST00000396352 HADHAP40939 763 aa15.96■□□□□ 0.15
HOXA3-202ENST00000396352 GLRBP48167 497 aa15.96■□□□□ 0.15
HOXA3-202ENST00000396352 NAGLUP54802 743 aa15.96■□□□□ 0.15
HOXA3-202ENST00000396352 MAP3K7CLP57077 242 aa15.96■□□□□ 0.15
HOXA3-202ENST00000396352 MS4A2Q01362 244 aa15.96■□□□□ 0.15
HOXA3-202ENST00000396352 LSAMPQ13449 338 aa15.96■□□□□ 0.15
HOXA3-202ENST00000396352 ADGRE1Q14246 886 aa15.96■□□□□ 0.15
HOXA3-202ENST00000396352 FLOT2Q14254 428 aa15.96■□□□□ 0.15
HOXA3-202ENST00000396352 TOP6BLQ8N6T0 577 aa15.96■□□□□ 0.15
HOXA3-202ENST00000396352 KCTD4Q8WVF5 259 aa15.96■□□□□ 0.15
HOXA3-202ENST00000396352 TMEM40Q8WWA1 233 aa15.96■□□□□ 0.15
HOXA3-202ENST00000396352 CATSPER2Q96P56 530 aa15.96■□□□□ 0.15
HOXA3-202ENST00000396352 APBA2Q99767 749 aa15.96■□□□□ 0.15
HOXA3-202ENST00000396352 RHOJQ9H4E5 214 aa15.96■□□□□ 0.15
HOXA3-202ENST00000396352 EPB41L1Q9H4G0 881 aa15.96■□□□□ 0.15
HOXA3-202ENST00000396352 OR6B1O95007 311 aa15.96■□□□□ 0.15
HOXA3-202ENST00000396352 IGFBP6P24592 240 aaPredicted RBP15.96■□□□□ 0.15
HOXA3-202ENST00000396352 MSX2P35548 267 aaPredicted RBP15.96■□□□□ 0.15
HOXA3-202ENST00000396352 CCNA1P78396 465 aa15.96■□□□□ 0.15
HOXA3-202ENST00000396352 PRKAA1Q13131 559 aa15.96■□□□□ 0.15
HOXA3-202ENST00000396352 LILRA2Q8N149 483 aa15.96■□□□□ 0.15
HOXA3-202ENST00000396352 ULBP1Q9BZM6 244 aa15.96■□□□□ 0.15
HOXA3-202ENST00000396352 DNAI2Q9GZS0 605 aa15.96■□□□□ 0.15
HOXA3-202ENST00000396352 CCDC78A2IDD5 438 aa15.95■□□□□ 0.14
HOXA3-202ENST00000396352 UNCXA6NJT0 531 aa15.95■□□□□ 0.14
HOXA3-202ENST00000396352 MTSS1O43312 755 aa15.95■□□□□ 0.14
HOXA3-202ENST00000396352 AVPR1AP37288 418 aa15.95■□□□□ 0.14
HOXA3-202ENST00000396352 PKNOX1P55347 436 aa15.95■□□□□ 0.14
HOXA3-202ENST00000396352 BIRC2Q13490 618 aa15.95■□□□□ 0.14
HOXA3-202ENST00000396352 INTS6LQ5JSJ4 861 aaKnown RBP15.95■□□□□ 0.14
HOXA3-202ENST00000396352 ITPRIPL1Q6GPH6 555 aa15.95■□□□□ 0.14
HOXA3-202ENST00000396352 FASTKD5Q7L8L6 764 aaKnown RBP15.95■□□□□ 0.14
HOXA3-202ENST00000396352 GPRIN1Q7Z2K8 1008 aa15.95■□□□□ 0.14
HOXA3-202ENST00000396352 TMEM126BQ8IUX1 230 aa15.95■□□□□ 0.14
HOXA3-202ENST00000396352 PGAM4Q8N0Y7 254 aa15.95■□□□□ 0.14
HOXA3-202ENST00000396352 FSTL5Q8N475 847 aaPredicted RBP15.95■□□□□ 0.14
HOXA3-202ENST00000396352 MARK4Q96L34 752 aa15.95■□□□□ 0.14
HOXA3-202ENST00000396352 TEKT5Q96M29 485 aa15.95■□□□□ 0.14
HOXA3-202ENST00000396352 KIFC1Q9BW19 673 aa15.95■□□□□ 0.14
HOXA3-202ENST00000396352 BRD8Q9H0E9 1235 aa15.95■□□□□ 0.14
HOXA3-202ENST00000396352 ZCWPW1Q9H0M4 648 aa15.95■□□□□ 0.14
HOXA3-202ENST00000396352 ZBTB26Q9HCK0 441 aa15.95■□□□□ 0.14
HOXA3-202ENST00000396352 RGS17Q9UGC6 210 aaPredicted RBP15.95■□□□□ 0.14
HOXA3-202ENST00000396352 TLK1Q9UKI8 766 aa15.95■□□□□ 0.14
HOXA3-202ENST00000396352 SNX10Q9Y5X0 201 aa15.95■□□□□ 0.14
HOXA3-202ENST00000396352 C9IYK1 514 aa15.95■□□□□ 0.14
HOXA3-202ENST00000396352 PGM3O95394 542 aa15.95■□□□□ 0.14
HOXA3-202ENST00000396352 SAT1P21673 171 aa15.95■□□□□ 0.14
HOXA3-202ENST00000396352 PMLP29590 882 aa15.95■□□□□ 0.14
HOXA3-202ENST00000396352 PRKAA2P54646 552 aa15.95■□□□□ 0.14
HOXA3-202ENST00000396352 GJA9P57773 515 aa15.95■□□□□ 0.14
HOXA3-202ENST00000396352 DAOAP59103 153 aa15.95■□□□□ 0.14
HOXA3-202ENST00000396352 HERC3Q15034 1050 aa15.95■□□□□ 0.14
HOXA3-202ENST00000396352 UBXN11Q5T124 520 aa15.95■□□□□ 0.14
HOXA3-202ENST00000396352 ARRDC4Q8NCT1 418 aa15.95■□□□□ 0.14
HOXA3-202ENST00000396352 VTI1BQ9UEU0 232 aa15.95■□□□□ 0.14
HOXA3-202ENST00000396352 CDYLQ9Y232 598 aa15.95■□□□□ 0.14
HOXA3-202ENST00000396352 PIN4Q9Y237 131 aaKnown RBP15.95■□□□□ 0.14
HOXA3-202ENST00000396352 SMIM31A0A1B0GVY4 71 aa15.95■□□□□ 0.14
HOXA3-202ENST00000396352 CRTAMO95727 393 aa15.95■□□□□ 0.14
HOXA3-202ENST00000396352 ADSLP30566 484 aaPredicted RBP15.95■□□□□ 0.14
HOXA3-202ENST00000396352 CDH17Q12864 832 aa15.95■□□□□ 0.14
HOXA3-202ENST00000396352 USP10Q14694 798 aaKnown RBP15.95■□□□□ 0.14
HOXA3-202ENST00000396352 TSTD2Q5T7W7 516 aa15.95■□□□□ 0.14
HOXA3-202ENST00000396352 ZFP1Q6P2D0 407 aa15.95■□□□□ 0.14
HOXA3-202ENST00000396352 CTU1Q7Z7A3 348 aaKnown RBP15.95■□□□□ 0.14
HOXA3-202ENST00000396352 SETD3Q86TU7 594 aaPredicted RBP15.95■□□□□ 0.14
HOXA3-202ENST00000396352 MFSD6LQ8IWD5 586 aa15.95■□□□□ 0.14
HOXA3-202ENST00000396352 USP13Q92995 863 aaPredicted RBP15.95■□□□□ 0.14
HOXA3-202ENST00000396352 PRICKLE1Q96MT3 831 aaPredicted RBP15.95■□□□□ 0.14
HOXA3-202ENST00000396352 WDR41Q9HAD4 459 aa15.95■□□□□ 0.14
HOXA3-202ENST00000396352 VCX3AQ9NNX9 186 aa15.95■□□□□ 0.14
HOXA3-202ENST00000396352 TMEM30AQ9NV96 361 aa15.95■□□□□ 0.14
HOXA3-202ENST00000396352 RUVBL2Q9Y230 463 aaKnown RBP15.95■□□□□ 0.14
HOXA3-202ENST00000396352 STX16-NPEPL1H3BU86 382 aa15.94■□□□□ 0.14
HOXA3-202ENST00000396352 DLX3O60479 287 aa15.94■□□□□ 0.14
HOXA3-202ENST00000396352 DDHD2O94830 711 aa15.94■□□□□ 0.14
HOXA3-202ENST00000396352 AHSGP02765 367 aa15.94■□□□□ 0.14
HOXA3-202ENST00000396352 SPATA31D3P0C874 917 aa15.94■□□□□ 0.14
HOXA3-202ENST00000396352 SLC12A1Q13621 1099 aa15.94■□□□□ 0.14
HOXA3-202ENST00000396352 PCBP1Q15365 356 aaKnown RBP eCLIP15.94■□□□□ 0.14
HOXA3-202ENST00000396352 RARS2Q5T160 578 aaKnown RBP15.94■□□□□ 0.14
HOXA3-202ENST00000396352 WSCD1Q658N2 575 aa15.94■□□□□ 0.14
HOXA3-202ENST00000396352 LRRC8EQ6NSJ5 796 aa15.94■□□□□ 0.14
HOXA3-202ENST00000396352 SPATA31D4Q6ZUB0 917 aa15.94■□□□□ 0.14
HOXA3-202ENST00000396352 SLC41A1Q8IVJ1 513 aa15.94■□□□□ 0.14
HOXA3-202ENST00000396352 BHLHE22Q8NFJ8 381 aaPredicted RBP15.94■□□□□ 0.14
HOXA3-202ENST00000396352 PGAP3Q96FM1 320 aaPredicted RBP15.94■□□□□ 0.14
HOXA3-202ENST00000396352 GPR78Q96P69 363 aa15.94■□□□□ 0.14
HOXA3-202ENST00000396352 VAT1Q99536 393 aa15.94■□□□□ 0.14
HOXA3-202ENST00000396352 RAB26Q9ULW5 256 aa15.94■□□□□ 0.14
HOXA3-202ENST00000396352 KLHL33A6NCF5 533 aa15.94■□□□□ 0.14
HOXA3-202ENST00000396352 GABRDO14764 452 aa15.94■□□□□ 0.14
HOXA3-202ENST00000396352 XPOTO43592 962 aaKnown RBP15.94■□□□□ 0.14
HOXA3-202ENST00000396352 TADA2AO75478 443 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms