RNA–Protein interactions for RNA: ENST00000393357.6

PHTF1-205, Transcript of putative homeodomain transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHTF1, Length 3,244 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-205ENST00000393357 CLK4Q9HAZ1 481 aaKnown RBP16.61■□□□□ 0.25
PHTF1-205ENST00000393357 TUBGCP4Q9UGJ1 667 aa16.61■□□□□ 0.25
PHTF1-205ENST00000393357 PCDHGC3Q9UN70 934 aa16.61■□□□□ 0.25
PHTF1-205ENST00000393357 SNX10Q9Y5X0 201 aa16.61■□□□□ 0.25
PHTF1-205ENST00000393357 MTHFD1P11586 935 aaKnown RBP16.61■□□□□ 0.25
PHTF1-205ENST00000393357 PCNAP12004 261 aa16.61■□□□□ 0.25
PHTF1-205ENST00000393357 CDH13P55290 713 aa16.61■□□□□ 0.25
PHTF1-205ENST00000393357 TSPY1Q01534 308 aa16.61■□□□□ 0.25
PHTF1-205ENST00000393357 RELAQ04206 551 aa16.61■□□□□ 0.25
PHTF1-205ENST00000393357 TGFBIQ15582 683 aa16.61■□□□□ 0.25
PHTF1-205ENST00000393357 ZBTB8OSQ8IWT0 167 aa16.61■□□□□ 0.25
PHTF1-205ENST00000393357 VPS39Q96JC1 886 aa16.61■□□□□ 0.25
PHTF1-205ENST00000393357 PDLIM7Q9NR12 457 aa16.61■□□□□ 0.25
PHTF1-205ENST00000393357 FAIMQ9NVQ4 179 aa16.61■□□□□ 0.25
PHTF1-205ENST00000393357 DSEQ9UL01 958 aa16.61■□□□□ 0.25
PHTF1-205ENST00000393357 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.61■□□□□ 0.25
PHTF1-205ENST00000393357 SH3PXD2BA1X283 911 aa16.6■□□□□ 0.25
PHTF1-205ENST00000393357 H3BNH8 94 aa16.6■□□□□ 0.25
PHTF1-205ENST00000393357 PPEF2O14830 753 aa16.6■□□□□ 0.25
PHTF1-205ENST00000393357 TSHRP16473 764 aa16.6■□□□□ 0.25
PHTF1-205ENST00000393357 NFKBIAP25963 317 aa16.6■□□□□ 0.25
PHTF1-205ENST00000393357 HARS2P49590 506 aaKnown RBP16.6■□□□□ 0.25
PHTF1-205ENST00000393357 YBX1P67809 324 aaKnown RBP16.6■□□□□ 0.25
PHTF1-205ENST00000393357 MPP1Q00013 466 aa16.6■□□□□ 0.25
PHTF1-205ENST00000393357 SEPT6Q14141 434 aa16.6■□□□□ 0.25
PHTF1-205ENST00000393357 KIZQ2M2Z5 673 aa16.6■□□□□ 0.25
PHTF1-205ENST00000393357 TMEM214Q6NUQ4 689 aaKnown RBP16.6■□□□□ 0.25
PHTF1-205ENST00000393357 PGAM4Q8N0Y7 254 aa16.6■□□□□ 0.25
PHTF1-205ENST00000393357 RP9Q8TA86 221 aaKnown RBP16.6■□□□□ 0.25
PHTF1-205ENST00000393357 POLE4Q9NR33 117 aa16.6■□□□□ 0.25
PHTF1-205ENST00000393357 SMOXQ9NWM0 555 aa16.6■□□□□ 0.25
PHTF1-205ENST00000393357 CIDEBQ9UHD4 219 aa16.6■□□□□ 0.25
PHTF1-205ENST00000393357 CNOT6Q9ULM6 557 aaKnown RBP16.6■□□□□ 0.25
PHTF1-205ENST00000393357 LAMA3Q16787 3333 aa16.6■□□□□ 0.25
PHTF1-205ENST00000393357 VWA5AO00534 786 aa16.6■□□□□ 0.25
PHTF1-205ENST00000393357 CCL22O00626 93 aa16.6■□□□□ 0.25
PHTF1-205ENST00000393357 GRID2O43424 1007 aa16.6■□□□□ 0.25
PHTF1-205ENST00000393357 FASTKQ14296 549 aaKnown RBP16.6■□□□□ 0.25
PHTF1-205ENST00000393357 CSHL1Q14406 222 aa16.6■□□□□ 0.25
PHTF1-205ENST00000393357 NANOGP8Q6NSW7 305 aa16.6■□□□□ 0.25
PHTF1-205ENST00000393357 RSBN1LQ6PCB5 846 aaPredicted RBP16.6■□□□□ 0.25
PHTF1-205ENST00000393357 BTLAQ7Z6A9 289 aa16.6■□□□□ 0.25
PHTF1-205ENST00000393357 CHERPQ8IWX8 916 aaKnown RBP16.6■□□□□ 0.25
PHTF1-205ENST00000393357 FSTL5Q8N475 847 aaPredicted RBP16.6■□□□□ 0.25
PHTF1-205ENST00000393357 SGCDQ92629 289 aa16.6■□□□□ 0.25
PHTF1-205ENST00000393357 MCRS1Q96EZ8 462 aa16.6■□□□□ 0.25
PHTF1-205ENST00000393357 PLEKHA8Q96JA3 519 aa16.6■□□□□ 0.25
PHTF1-205ENST00000393357 DPEP3Q9H4B8 488 aa16.6■□□□□ 0.25
PHTF1-205ENST00000393357 LTB4R2Q9NPC1 389 aa16.6■□□□□ 0.25
PHTF1-205ENST00000393357 MTMR10Q9NXD2 777 aa16.6■□□□□ 0.25
PHTF1-205ENST00000393357 BPTFQ12830 3046 aa16.6■□□□□ 0.25
PHTF1-205ENST00000393357 TRIP11Q15643 1979 aa16.6■□□□□ 0.25
PHTF1-205ENST00000393357 FUOMA2VDF0 154 aa16.6■□□□□ 0.25
PHTF1-205ENST00000393357 TCAF2A6NFQ2 919 aa16.6■□□□□ 0.25
PHTF1-205ENST00000393357 GPR25O00155 361 aa16.6■□□□□ 0.25
PHTF1-205ENST00000393357 MATN2O00339 956 aa16.6■□□□□ 0.25
PHTF1-205ENST00000393357 NR5A2O00482 541 aa16.6■□□□□ 0.25
PHTF1-205ENST00000393357 MSCO60682 206 aa16.6■□□□□ 0.25
PHTF1-205ENST00000393357 ADAM23O75077 832 aa16.6■□□□□ 0.25
PHTF1-205ENST00000393357 PGAM1P18669 254 aa16.6■□□□□ 0.25
PHTF1-205ENST00000393357 NMBRP28336 390 aa16.6■□□□□ 0.25
PHTF1-205ENST00000393357 SLC12A1Q13621 1099 aa16.6■□□□□ 0.25
PHTF1-205ENST00000393357 BBS5Q8N3I7 341 aa16.6■□□□□ 0.25
PHTF1-205ENST00000393357 OSBPL11Q9BXB4 747 aa16.6■□□□□ 0.25
PHTF1-205ENST00000393357 CCDC90BQ9GZT6 254 aa16.6■□□□□ 0.25
PHTF1-205ENST00000393357 MUC3BQ9H195 1237 aa16.6■□□□□ 0.25
PHTF1-205ENST00000393357 SLC38A7Q9NVC3 462 aa16.6■□□□□ 0.25
PHTF1-205ENST00000393357 BCAP29Q9UHQ4 241 aa16.6■□□□□ 0.25
PHTF1-205ENST00000393357 VANGL2Q9ULK5 521 aa16.6■□□□□ 0.25
PHTF1-205ENST00000393357 BCAS2O75934 225 aaPredicted RBP16.59■□□□□ 0.25
PHTF1-205ENST00000393357 GLDCP23378 1020 aa16.59■□□□□ 0.25
PHTF1-205ENST00000393357 SOWAHAQ2M3V2 549 aa16.59■□□□□ 0.25
PHTF1-205ENST00000393357 KCNMB4Q86W47 210 aa16.59■□□□□ 0.25
PHTF1-205ENST00000393357 ZNF567Q8N184 647 aa16.59■□□□□ 0.25
PHTF1-205ENST00000393357 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.59■□□□□ 0.25
PHTF1-205ENST00000393357 HESX1Q9UBX0 185 aa16.59■□□□□ 0.25
PHTF1-205ENST00000393357 NUP205Q92621 2012 aa16.59■□□□□ 0.25
PHTF1-205ENST00000393357 ZNF831Q5JPB2 1677 aa16.59■□□□□ 0.25
PHTF1-205ENST00000393357 PRSS51A0A1B0GVH4 220 aa16.59■□□□□ 0.25
PHTF1-205ENST00000393357 BCLAF3A2AJT9 711 aaKnown RBP16.59■□□□□ 0.25
PHTF1-205ENST00000393357 CLOCKO15516 846 aa16.59■□□□□ 0.25
PHTF1-205ENST00000393357 ARL1P40616 181 aaPredicted RBP16.59■□□□□ 0.25
PHTF1-205ENST00000393357 NUP107P57740 925 aa16.59■□□□□ 0.25
PHTF1-205ENST00000393357 ZFP1Q6P2D0 407 aa16.59■□□□□ 0.25
PHTF1-205ENST00000393357 PIWIL3Q7Z3Z3 882 aaKnown RBP16.59■□□□□ 0.25
PHTF1-205ENST00000393357 VPS50Q96JG6 964 aa16.59■□□□□ 0.25
PHTF1-205ENST00000393357 TBCBQ99426 244 aa16.59■□□□□ 0.25
PHTF1-205ENST00000393357 FRMD8P1Q9BZ68 369 aaPredicted RBP16.59■□□□□ 0.25
PHTF1-205ENST00000393357 BRD8Q9H0E9 1235 aa16.59■□□□□ 0.25
PHTF1-205ENST00000393357 EPB41L1Q9H4G0 881 aa16.59■□□□□ 0.25
PHTF1-205ENST00000393357 ZFYVE28Q9HCC9 887 aa16.59■□□□□ 0.25
PHTF1-205ENST00000393357 PNPLA3Q9NST1 481 aa16.59■□□□□ 0.25
PHTF1-205ENST00000393357 BFARQ9NZS9 450 aa16.59■□□□□ 0.25
PHTF1-205ENST00000393357 ADGRA2Q96PE1 1338 aa16.59■□□□□ 0.25
PHTF1-205ENST00000393357 A0A0A0MRY4 1105 aa16.58■□□□□ 0.25
PHTF1-205ENST00000393357 HEATR9A2RTY3 570 aa16.58■□□□□ 0.25
PHTF1-205ENST00000393357 A6NL46 340 aa16.58■□□□□ 0.25
PHTF1-205ENST00000393357 INPP4BO15327 924 aa16.58■□□□□ 0.25
PHTF1-205ENST00000393357 AP1G1O43747 822 aa16.58■□□□□ 0.25
PHTF1-205ENST00000393357 NOL3O60936 208 aaKnown RBP16.58■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms