RNA–Protein interactions for RNA: ENST00000389995.4

SOD1-202, Transcript of superoxide dismutase 1, humanhuman

TSL 3 BASIC

Gene SOD1, Length 865 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD1-202ENST00000389995 SLC35F3Q8IY50 421 aa12.09□□□□□ -0.47
SOD1-202ENST00000389995 GRIN3AQ8TCU5 1115 aa12.09□□□□□ -0.47
SOD1-202ENST00000389995 SGF29Q96ES7 293 aa12.09□□□□□ -0.47
SOD1-202ENST00000389995 PPP1R13BQ96KQ4 1090 aa12.09□□□□□ -0.47
SOD1-202ENST00000389995 BTN2A3PQ96KV6 586 aa12.09□□□□□ -0.47
SOD1-202ENST00000389995 FOXP3Q9BZS1 431 aa12.09□□□□□ -0.47
SOD1-202ENST00000389995 USP29Q9HBJ7 922 aa12.09□□□□□ -0.47
SOD1-202ENST00000389995 EVA1BQ9NVM1 165 aa12.09□□□□□ -0.47
SOD1-202ENST00000389995 VPS28Q9UK41 221 aa12.09□□□□□ -0.47
SOD1-202ENST00000389995 CACNA1DQ01668 2161 aa12.08□□□□□ -0.48
SOD1-202ENST00000389995 CCDC187A0A096LP49 1063 aa12.08□□□□□ -0.48
SOD1-202ENST00000389995 SPTY2D1-AS1A0A0U1RR47 76 aa12.08□□□□□ -0.48
SOD1-202ENST00000389995 TCAF2A6NFQ2 919 aa12.08□□□□□ -0.48
SOD1-202ENST00000389995 KCNU1A8MYU2 1149 aa12.08□□□□□ -0.48
SOD1-202ENST00000389995 ALOX15BO15296 676 aa12.08□□□□□ -0.48
SOD1-202ENST00000389995 SMAD6O43541 496 aaKnown RBP12.08□□□□□ -0.48
SOD1-202ENST00000389995 GCATO75600 419 aa12.08□□□□□ -0.48
SOD1-202ENST00000389995 FBXO21O94952 628 aa12.08□□□□□ -0.48
SOD1-202ENST00000389995 RHOBTB3O94955 611 aa12.08□□□□□ -0.48
SOD1-202ENST00000389995 GJB6O95452 261 aa12.08□□□□□ -0.48
SOD1-202ENST00000389995 TRUB2O95900 331 aaKnown RBP12.08□□□□□ -0.48
SOD1-202ENST00000389995 ITGA2BP08514 1039 aa12.08□□□□□ -0.48
SOD1-202ENST00000389995 SRCP12931 536 aa12.08□□□□□ -0.48
SOD1-202ENST00000389995 NME1P15531 152 aaKnown RBP12.08□□□□□ -0.48
SOD1-202ENST00000389995 JUNDP17535 347 aa12.08□□□□□ -0.48
SOD1-202ENST00000389995 WT1P19544 449 aaPredicted RBP12.08□□□□□ -0.48
SOD1-202ENST00000389995 RRM1P23921 792 aa12.08□□□□□ -0.48
SOD1-202ENST00000389995 MCCD1P59942 119 aaPredicted RBP12.08□□□□□ -0.48
SOD1-202ENST00000389995 TLE1Q04724 770 aa12.08□□□□□ -0.48
SOD1-202ENST00000389995 EIF2B5Q13144 721 aaKnown RBP12.08□□□□□ -0.48
SOD1-202ENST00000389995 NNTQ13423 1086 aa12.08□□□□□ -0.48
SOD1-202ENST00000389995 PDE1CQ14123 709 aaPredicted RBP12.08□□□□□ -0.48
SOD1-202ENST00000389995 TAF5Q15542 800 aa12.08□□□□□ -0.48
SOD1-202ENST00000389995 TCEA2Q15560 299 aa12.08□□□□□ -0.48
SOD1-202ENST00000389995 CNGA2Q16280 664 aa12.08□□□□□ -0.48
SOD1-202ENST00000389995 TMEM259Q4ZIN3 620 aa12.08□□□□□ -0.48
SOD1-202ENST00000389995 ARSIQ5FYB1 569 aa12.08□□□□□ -0.48
SOD1-202ENST00000389995 FBXL22Q6P050 247 aa12.08□□□□□ -0.48
SOD1-202ENST00000389995 LINGO4Q6UY18 593 aa12.08□□□□□ -0.48
SOD1-202ENST00000389995 OR2A12Q8NGT7 310 aa12.08□□□□□ -0.48
SOD1-202ENST00000389995 IFT43Q96FT9 208 aa12.08□□□□□ -0.48
SOD1-202ENST00000389995 HSFY1Q96LI6 401 aa12.08□□□□□ -0.48
SOD1-202ENST00000389995 RPRD1AQ96P16 312 aaPredicted RBP12.08□□□□□ -0.48
SOD1-202ENST00000389995 CCDC3Q9BQI4 270 aa12.08□□□□□ -0.48
SOD1-202ENST00000389995 SLC17A9Q9BYT1 436 aa12.08□□□□□ -0.48
SOD1-202ENST00000389995 TNKS2Q9H2K2 1166 aa12.08□□□□□ -0.48
SOD1-202ENST00000389995 EPB41L5Q9HCM4 733 aa12.08□□□□□ -0.48
SOD1-202ENST00000389995 GPR27Q9NS67 375 aa12.08□□□□□ -0.48
SOD1-202ENST00000389995 IPO11Q9UI26 975 aaKnown RBP12.08□□□□□ -0.48
SOD1-202ENST00000389995 KIAA1257Q9ULG3 409 aa12.08□□□□□ -0.48
SOD1-202ENST00000389995 VANGL2Q9ULK5 521 aa12.08□□□□□ -0.48
SOD1-202ENST00000389995 PNMA8BQ9ULN7 279 aaPredicted RBP12.08□□□□□ -0.48
SOD1-202ENST00000389995 OR51B4Q9Y5P0 310 aa12.08□□□□□ -0.48
SOD1-202ENST00000389995 STX10O60499 249 aa12.07□□□□□ -0.48
SOD1-202ENST00000389995 CELA2BP08218 269 aaPredicted RBP12.07□□□□□ -0.48
SOD1-202ENST00000389995 PAEPP09466 180 aa12.07□□□□□ -0.48
SOD1-202ENST00000389995 EPB41P11171 864 aaKnown RBP12.07□□□□□ -0.48
SOD1-202ENST00000389995 ADKP55263 362 aaKnown RBP12.07□□□□□ -0.48
SOD1-202ENST00000389995 YWHAEP62258 255 aaKnown RBP12.07□□□□□ -0.48
SOD1-202ENST00000389995 SPIDRQ14159 915 aa12.07□□□□□ -0.48
SOD1-202ENST00000389995 TBR1Q16650 682 aa12.07□□□□□ -0.48
SOD1-202ENST00000389995 NEK5Q6P3R8 708 aa12.07□□□□□ -0.48
SOD1-202ENST00000389995 DENND1BQ6P3S1 775 aa12.07□□□□□ -0.48
SOD1-202ENST00000389995 ERN2Q76MJ5 926 aaKnown RBP12.07□□□□□ -0.48
SOD1-202ENST00000389995 C14orf80Q86SX3 495 aa12.07□□□□□ -0.48
SOD1-202ENST00000389995 PARGQ86W56 976 aa12.07□□□□□ -0.48
SOD1-202ENST00000389995 PTRH1Q86Y79 214 aaKnown RBP12.07□□□□□ -0.48
SOD1-202ENST00000389995 GUF1Q8N442 669 aaKnown RBP12.07□□□□□ -0.48
SOD1-202ENST00000389995 ATP6V0D2Q8N8Y2 350 aa12.07□□□□□ -0.48
SOD1-202ENST00000389995 ATP11CQ8NB49 1132 aa12.07□□□□□ -0.48
SOD1-202ENST00000389995 RNF34Q969K3 372 aa12.07□□□□□ -0.48
SOD1-202ENST00000389995 PSMB7Q99436 277 aa12.07□□□□□ -0.48
SOD1-202ENST00000389995 IL12RB2Q99665 862 aa12.07□□□□□ -0.48
SOD1-202ENST00000389995 MUC3BQ9H195 1237 aa12.07□□□□□ -0.48
SOD1-202ENST00000389995 DYRK4Q9NR20 520 aa12.07□□□□□ -0.48
SOD1-202ENST00000389995 RABGEF1Q9UJ41 708 aa12.07□□□□□ -0.48
SOD1-202ENST00000389995 COQ4Q9Y3A0 265 aa12.07□□□□□ -0.48
SOD1-202ENST00000389995 CREBBPQ92793 2442 aa12.07□□□□□ -0.48
SOD1-202ENST00000389995 H3BM21 787 aa12.06□□□□□ -0.48
SOD1-202ENST00000389995 PLD2O14939 933 aa12.06□□□□□ -0.48
SOD1-202ENST00000389995 TCEA3O75764 348 aa12.06□□□□□ -0.48
SOD1-202ENST00000389995 CNTN5O94779 1100 aa12.06□□□□□ -0.48
SOD1-202ENST00000389995 IGLV3-25P01717 112 aa12.06□□□□□ -0.48
SOD1-202ENST00000389995 AFPP02771 609 aaKnown RBP12.06□□□□□ -0.48
SOD1-202ENST00000389995 UGT1A5P35504 534 aa12.06□□□□□ -0.48
SOD1-202ENST00000389995 DNM1Q05193 864 aaKnown RBP12.06□□□□□ -0.48
SOD1-202ENST00000389995 DPYDQ12882 1025 aa12.06□□□□□ -0.48
SOD1-202ENST00000389995 AUHQ13825 339 aaKnown RBP12.06□□□□□ -0.48
SOD1-202ENST00000389995 UBAP2LQ14157 1087 aaKnown RBP12.06□□□□□ -0.48
SOD1-202ENST00000389995 CLCA4Q14CN2 919 aa12.06□□□□□ -0.48
SOD1-202ENST00000389995 PRRT3Q5FWE3 981 aa12.06□□□□□ -0.48
SOD1-202ENST00000389995 RABGAP1LQ5R372 815 aa12.06□□□□□ -0.48
SOD1-202ENST00000389995 CRYBG3Q68DQ2 2970 aa12.06□□□□□ -0.48
SOD1-202ENST00000389995 KYAT3Q6YP21 454 aaKnown RBP12.06□□□□□ -0.48
SOD1-202ENST00000389995 RAB11FIP2Q7L804 512 aa12.06□□□□□ -0.48
SOD1-202ENST00000389995 FBXO39Q8N4B4 442 aa12.06□□□□□ -0.48
SOD1-202ENST00000389995 TMIEQ8NEW7 156 aa12.06□□□□□ -0.48
SOD1-202ENST00000389995 GRAMD1AQ96CP6 724 aa12.06□□□□□ -0.48
SOD1-202ENST00000389995 BOCQ9BWV1 1114 aa12.06□□□□□ -0.48
SOD1-202ENST00000389995 FAM204AQ9H8W3 233 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 631.1 ms