RNA–Protein interactions for RNA: ENST00000377865.6

PCDH9-202, Transcript of protocadherin 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH9, Length 5,709 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-202ENST00000377865 NTPCRQ9BSD7 190 aaKnown RBP8.88□□□□□ -0.99
PCDH9-202ENST00000377865 UNC93B1Q9H1C4 597 aa8.88□□□□□ -0.99
PCDH9-202ENST00000377865 RHOJQ9H4E5 214 aa8.88□□□□□ -0.99
PCDH9-202ENST00000377865 USE1Q9NZ43 259 aa8.88□□□□□ -0.99
PCDH9-202ENST00000377865 DERAQ9Y315 318 aa8.88□□□□□ -0.99
PCDH9-202ENST00000377865 LIMK2P53671 638 aa8.88□□□□□ -0.99
PCDH9-202ENST00000377865 DDR2Q16832 855 aa8.88□□□□□ -0.99
PCDH9-202ENST00000377865 SLC27A1Q6PCB7 646 aa8.88□□□□□ -0.99
PCDH9-202ENST00000377865 BLOC1S5Q8TDH9 187 aa8.88□□□□□ -0.99
PCDH9-202ENST00000377865 TOP1MTQ969P6 601 aa8.88□□□□□ -0.99
PCDH9-202ENST00000377865 OLA1Q9NTK5 396 aaKnown RBP8.88□□□□□ -0.99
PCDH9-202ENST00000377865 TUBA8Q9NY65 449 aaPredicted RBP8.88□□□□□ -0.99
PCDH9-202ENST00000377865 ZMYND8Q9ULU4 1186 aaPredicted RBP8.88□□□□□ -0.99
PCDH9-202ENST00000377865 MPSTP25325 297 aa8.88□□□□□ -0.99
PCDH9-202ENST00000377865 PSMB9P28065 219 aa8.88□□□□□ -0.99
PCDH9-202ENST00000377865 GDF10P55107 478 aa8.88□□□□□ -0.99
PCDH9-202ENST00000377865 NDUFA5Q16718 116 aa8.88□□□□□ -0.99
PCDH9-202ENST00000377865 TTLL9Q3SXZ7 439 aa8.88□□□□□ -0.99
PCDH9-202ENST00000377865 LCLAT1Q6UWP7 414 aa8.88□□□□□ -0.99
PCDH9-202ENST00000377865 STK32CQ86UX6 486 aa8.88□□□□□ -0.99
PCDH9-202ENST00000377865 TBC1D21Q8IYX1 336 aa8.88□□□□□ -0.99
PCDH9-202ENST00000377865 RNF217Q8TC41 542 aa8.88□□□□□ -0.99
PCDH9-202ENST00000377865 FAM120BQ96EK7 910 aaKnown RBP8.88□□□□□ -0.99
PCDH9-202ENST00000377865 SYT15Q9BQS2 421 aa8.88□□□□□ -0.99
PCDH9-202ENST00000377865 RBM22Q9NW64 420 aaKnown RBP eCLIP8.88□□□□□ -0.99
PCDH9-202ENST00000377865 A6NHS1 94 aa8.88□□□□□ -0.99
PCDH9-202ENST00000377865 CETPP11597 493 aa8.88□□□□□ -0.99
PCDH9-202ENST00000377865 VAC14Q08AM6 782 aa8.88□□□□□ -0.99
PCDH9-202ENST00000377865 TRAF3Q13114 568 aa8.88□□□□□ -0.99
PCDH9-202ENST00000377865 GTF2H3Q13889 308 aa8.88□□□□□ -0.99
PCDH9-202ENST00000377865 KCNJ11Q14654 390 aa8.88□□□□□ -0.99
PCDH9-202ENST00000377865 KCTD21Q4G0X4 260 aa8.88□□□□□ -0.99
PCDH9-202ENST00000377865 GPR107Q5VW38 600 aa8.88□□□□□ -0.99
PCDH9-202ENST00000377865 ABHD15Q6UXT9 468 aa8.88□□□□□ -0.99
PCDH9-202ENST00000377865 FAM228AQ86W67 206 aa8.88□□□□□ -0.99
PCDH9-202ENST00000377865 ANKRD13AQ8IZ07 590 aa8.88□□□□□ -0.99
PCDH9-202ENST00000377865 PTCD2Q8WV60 388 aaKnown RBP8.88□□□□□ -0.99
PCDH9-202ENST00000377865 CEP44Q9C0F1 390 aa8.88□□□□□ -0.99
PCDH9-202ENST00000377865 SENP6Q9GZR1 1112 aaPredicted RBP8.88□□□□□ -0.99
PCDH9-202ENST00000377865 UBP1Q9NZI7 540 aa8.88□□□□□ -0.99
PCDH9-202ENST00000377865 SF3B1O75533 1304 aaKnown RBP eCLIP8.88□□□□□ -0.995e-6■■■■■ 139.6
PCDH9-202ENST00000377865 MAST2Q6P0Q8 1798 aa8.88□□□□□ -0.99
PCDH9-202ENST00000377865 FAM189A1O60320 539 aa8.87□□□□□ -0.99
PCDH9-202ENST00000377865 CILPO75339 1184 aa8.87□□□□□ -0.99
PCDH9-202ENST00000377865 VTNP04004 478 aa8.87□□□□□ -0.99
PCDH9-202ENST00000377865 ST13P50502 369 aaKnown RBP8.87□□□□□ -0.99
PCDH9-202ENST00000377865 HIRAP54198 1017 aaPredicted RBP8.87□□□□□ -0.99
PCDH9-202ENST00000377865 RALGPS1Q5JS13 557 aa8.87□□□□□ -0.99
PCDH9-202ENST00000377865 OTUD3Q5T2D3 398 aaPredicted RBP8.87□□□□□ -0.99
PCDH9-202ENST00000377865 IL31Q6EBC2 164 aa8.87□□□□□ -0.99
PCDH9-202ENST00000377865 KLHDC10Q6PID8 442 aa8.87□□□□□ -0.99
PCDH9-202ENST00000377865 TIFABQ6ZNK6 161 aa8.87□□□□□ -0.99
PCDH9-202ENST00000377865 PTAR1Q7Z6K3 402 aaPredicted RBP8.87□□□□□ -0.99
PCDH9-202ENST00000377865 CPNE8Q86YQ8 564 aa8.87□□□□□ -0.99
PCDH9-202ENST00000377865 MAGEE2Q8TD90 523 aaPredicted RBP8.87□□□□□ -0.99
PCDH9-202ENST00000377865 FIG4Q92562 907 aa8.87□□□□□ -0.99
PCDH9-202ENST00000377865 ROPN1LQ96C74 230 aa8.87□□□□□ -0.99
PCDH9-202ENST00000377865 FBXL18Q96ME1 805 aa8.87□□□□□ -0.99
PCDH9-202ENST00000377865 CPXM1Q96SM3 734 aa8.87□□□□□ -0.99
PCDH9-202ENST00000377865 NPAS2Q99743 824 aa8.87□□□□□ -0.99
PCDH9-202ENST00000377865 MROH8Q9H579 483 aa8.87□□□□□ -0.99
PCDH9-202ENST00000377865 ENOPH1Q9UHY7 261 aa8.87□□□□□ -0.99
PCDH9-202ENST00000377865 TSR3Q9UJK0 312 aaKnown RBP8.87□□□□□ -0.99
PCDH9-202ENST00000377865 CNTNAP2Q9UHC6 1331 aa8.87□□□□□ -0.99
PCDH9-202ENST00000377865 MATN2O00339 956 aa8.87□□□□□ -0.99
PCDH9-202ENST00000377865 NPHS1O60500 1241 aa8.87□□□□□ -0.99
PCDH9-202ENST00000377865 TMEM63AO94886 807 aa8.87□□□□□ -0.99
PCDH9-202ENST00000377865 KCNH1O95259 989 aa8.87□□□□□ -0.99
PCDH9-202ENST00000377865 PENKP01210 267 aaPredicted RBP8.87□□□□□ -0.99
PCDH9-202ENST00000377865 IDO1P14902 403 aa8.87□□□□□ -0.99
PCDH9-202ENST00000377865 YBX3P16989 372 aaKnown RBP eCLIP8.87□□□□□ -0.99
PCDH9-202ENST00000377865 ITGAXP20702 1163 aa8.87□□□□□ -0.99
PCDH9-202ENST00000377865 RENBPP51606 427 aa8.87□□□□□ -0.99
PCDH9-202ENST00000377865 CDCA2Q69YH5 1023 aaPredicted RBP8.87□□□□□ -0.99
PCDH9-202ENST00000377865 REP15Q6BDI9 236 aa8.87□□□□□ -0.99
PCDH9-202ENST00000377865 CCDC80Q76M96 950 aa8.87□□□□□ -0.99
PCDH9-202ENST00000377865 PLPPR4Q7Z2D5 763 aa8.87□□□□□ -0.99
PCDH9-202ENST00000377865 TNS4Q8IZW8 715 aa8.87□□□□□ -0.99
PCDH9-202ENST00000377865 MYO1HQ8N1T3 1032 aa8.87□□□□□ -0.99
PCDH9-202ENST00000377865 FAM47BQ8NA70 645 aa8.87□□□□□ -0.99
PCDH9-202ENST00000377865 ITFG2Q969R8 447 aa8.87□□□□□ -0.99
PCDH9-202ENST00000377865 CDT1Q9H211 546 aa8.87□□□□□ -0.99
PCDH9-202ENST00000377865 IMPAD1Q9NX62 359 aa8.87□□□□□ -0.99
PCDH9-202ENST00000377865 XPR1Q9UBH6 696 aa8.87□□□□□ -0.99
PCDH9-202ENST00000377865 PADI4Q9UM07 663 aa8.87□□□□□ -0.99
PCDH9-202ENST00000377865 DDX60Q8IY21 1712 aaKnown RBP8.87□□□□□ -0.99
PCDH9-202ENST00000377865 MYO5AQ9Y4I1 1855 aaKnown RBP8.87□□□□□ -0.99
PCDH9-202ENST00000377865 HS6ST1O60243 411 aa8.87□□□□□ -0.99
PCDH9-202ENST00000377865 CCNT2O60583 730 aaKnown RBP8.87□□□□□ -0.99
PCDH9-202ENST00000377865 CNOT3O75175 753 aaKnown RBP8.87□□□□□ -0.99
PCDH9-202ENST00000377865 UMPSP11172 480 aa8.87□□□□□ -0.99
PCDH9-202ENST00000377865 ACO1P21399 889 aaKnown RBP8.87□□□□□ -0.99
PCDH9-202ENST00000377865 ARL2P36404 184 aa8.87□□□□□ -0.99
PCDH9-202ENST00000377865 ETFBP38117 255 aa8.87□□□□□ -0.99
PCDH9-202ENST00000377865 FSCN1Q16658 493 aaKnown RBP8.87□□□□□ -0.99
PCDH9-202ENST00000377865 LRRC49Q8IUZ0 686 aa8.87□□□□□ -0.99
PCDH9-202ENST00000377865 OR7A2PQ8NGA2 310 aa8.87□□□□□ -0.99
PCDH9-202ENST00000377865 RSPH1Q8WYR4 309 aa8.87□□□□□ -0.99
PCDH9-202ENST00000377865 ASIC4Q96FT7 647 aa8.87□□□□□ -0.99
PCDH9-202ENST00000377865 SMARCD1Q96GM5 515 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms