RNA–Protein interactions for RNA: ENST00000375703.7

MSH5-201, Transcript of mutS homolog 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSH5, Length 2,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-201ENST00000375703 LIN52Q52LA3 116 aa14.79□□□□□ -0.04
MSH5-201ENST00000375703 PPM1LQ5SGD2 360 aa14.79□□□□□ -0.04
MSH5-201ENST00000375703 OTOP3Q7RTS5 596 aa14.79□□□□□ -0.04
MSH5-201ENST00000375703 SDCCAG8Q86SQ7 713 aaPredicted RBP14.79□□□□□ -0.04
MSH5-201ENST00000375703 DSELQ8IZU8 1212 aa14.79□□□□□ -0.04
MSH5-201ENST00000375703 EDEM1Q92611 657 aa14.79□□□□□ -0.04
MSH5-201ENST00000375703 PGAP3Q96FM1 320 aaPredicted RBP14.79□□□□□ -0.04
MSH5-201ENST00000375703 CELF6Q96J87 481 aaKnown RBP14.79□□□□□ -0.04
MSH5-201ENST00000375703 CDRT15Q96T59 188 aa14.79□□□□□ -0.04
MSH5-201ENST00000375703 CENPKQ9BS16 269 aa14.79□□□□□ -0.04
MSH5-201ENST00000375703 TKTL2Q9H0I9 626 aa14.79□□□□□ -0.04
MSH5-201ENST00000375703 RHOJQ9H4E5 214 aa14.79□□□□□ -0.04
MSH5-201ENST00000375703 PRPF19Q9UMS4 504 aaKnown RBP14.79□□□□□ -0.04
MSH5-201ENST00000375703 UNCXA6NJT0 531 aa14.79□□□□□ -0.04
MSH5-201ENST00000375703 GRID2O43424 1007 aa14.79□□□□□ -0.04
MSH5-201ENST00000375703 DDHD2O94830 711 aa14.79□□□□□ -0.04
MSH5-201ENST00000375703 AHSGP02765 367 aa14.79□□□□□ -0.04
MSH5-201ENST00000375703 ALDH1A3P47895 512 aa14.79□□□□□ -0.04
MSH5-201ENST00000375703 PRKAA1Q13131 559 aa14.79□□□□□ -0.04
MSH5-201ENST00000375703 SLC12A1Q13621 1099 aa14.79□□□□□ -0.04
MSH5-201ENST00000375703 NXNQ6DKJ4 435 aa14.79□□□□□ -0.04
MSH5-201ENST00000375703 TMC7Q7Z402 723 aa14.79□□□□□ -0.04
MSH5-201ENST00000375703 GPR142Q7Z601 462 aa14.79□□□□□ -0.04
MSH5-201ENST00000375703 LINC00523Q86TU6 105 aa14.79□□□□□ -0.04
MSH5-201ENST00000375703 SENP8Q96LD8 212 aa14.79□□□□□ -0.04
MSH5-201ENST00000375703 ZFP42Q96MM3 310 aa14.79□□□□□ -0.04
MSH5-201ENST00000375703 KIFC1Q9BW19 673 aa14.79□□□□□ -0.04
MSH5-201ENST00000375703 CACNG4Q9UBN1 327 aa14.79□□□□□ -0.04
MSH5-201ENST00000375703 PSMD13Q9UNM6 376 aa14.79□□□□□ -0.04
MSH5-201ENST00000375703 INPP5FQ9Y2H2 1132 aa14.79□□□□□ -0.04
MSH5-201ENST00000375703 MYBPHLA2RUH7 354 aa14.78□□□□□ -0.04
MSH5-201ENST00000375703 PTGESO14684 152 aa14.78□□□□□ -0.04
MSH5-201ENST00000375703 PSMD3O43242 534 aa14.78□□□□□ -0.04
MSH5-201ENST00000375703 TREHO43280 583 aa14.78□□□□□ -0.04
MSH5-201ENST00000375703 LRIG2O94898 1065 aa14.78□□□□□ -0.04
MSH5-201ENST00000375703 HK2P52789 917 aa14.78□□□□□ -0.04
MSH5-201ENST00000375703 R3HDM1Q15032 1099 aaKnown RBP14.78□□□□□ -0.04
MSH5-201ENST00000375703 TWF2Q6IBS0 349 aaKnown RBP14.78□□□□□ -0.04
MSH5-201ENST00000375703 FSTL5Q8N475 847 aaPredicted RBP14.78□□□□□ -0.04
MSH5-201ENST00000375703 USP33Q8TEY7 942 aa14.78□□□□□ -0.04
MSH5-201ENST00000375703 KCTD4Q8WVF5 259 aa14.78□□□□□ -0.04
MSH5-201ENST00000375703 PCED1BQ96HM7 432 aa14.78□□□□□ -0.04
MSH5-201ENST00000375703 VTI1BQ9UEU0 232 aa14.78□□□□□ -0.04
MSH5-201ENST00000375703 TIMM13Q9Y5L4 95 aaPredicted RBP14.78□□□□□ -0.04
MSH5-201ENST00000375703 SLCO1B7G3V0H7 640 aa14.78□□□□□ -0.04
MSH5-201ENST00000375703 F2P00734 622 aa14.78□□□□□ -0.04
MSH5-201ENST00000375703 GSTT1P30711 240 aa14.78□□□□□ -0.04
MSH5-201ENST00000375703 CSRP3P50461 194 aa14.78□□□□□ -0.04
MSH5-201ENST00000375703 FOLH1Q04609 750 aa14.78□□□□□ -0.04
MSH5-201ENST00000375703 MFSD10Q14728 455 aa14.78□□□□□ -0.04
MSH5-201ENST00000375703 PDK3Q15120 406 aa14.78□□□□□ -0.04
MSH5-201ENST00000375703 FAM35AQ86V20 835 aa14.78□□□□□ -0.04
MSH5-201ENST00000375703 SLC41A1Q8IVJ1 513 aa14.78□□□□□ -0.04
MSH5-201ENST00000375703 PQLC1Q8N2U9 271 aa14.78□□□□□ -0.04
MSH5-201ENST00000375703 CPSF7Q8N684 471 aaKnown RBP14.78□□□□□ -0.04
MSH5-201ENST00000375703 ZMIZ2Q8NF64 920 aa14.78□□□□□ -0.04
MSH5-201ENST00000375703 ZSCAN18Q8TBC5 510 aaPredicted RBP14.78□□□□□ -0.04
MSH5-201ENST00000375703 RRN3Q9NYV6 651 aa14.78□□□□□ -0.04
MSH5-201ENST00000375703 C6orf203Q9P0P8 240 aaPredicted RBP14.78□□□□□ -0.04
MSH5-201ENST00000375703 ACOT9Q9Y305 439 aa14.78□□□□□ -0.04
MSH5-201ENST00000375703 CFLARO15519 480 aa14.77□□□□□ -0.04
MSH5-201ENST00000375703 SLC35E2BP0CK96 405 aa14.77□□□□□ -0.04
MSH5-201ENST00000375703 DNAJB2P25686 324 aa14.77□□□□□ -0.04
MSH5-201ENST00000375703 GABRB3P28472 473 aa14.77□□□□□ -0.04
MSH5-201ENST00000375703 RAB41Q5JT25 222 aa14.77□□□□□ -0.04
MSH5-201ENST00000375703 PRAMEF19Q5SWL8 479 aa14.77□□□□□ -0.04
MSH5-201ENST00000375703 OGFRL1Q5TC84 451 aaPredicted RBP14.77□□□□□ -0.04
MSH5-201ENST00000375703 CNTD1Q8N815 330 aa14.77□□□□□ -0.04
MSH5-201ENST00000375703 SPATA22Q8NHS9 363 aa14.77□□□□□ -0.04
MSH5-201ENST00000375703 STYXQ8WUJ0 223 aa14.77□□□□□ -0.04
MSH5-201ENST00000375703 RNF34Q969K3 372 aa14.77□□□□□ -0.04
MSH5-201ENST00000375703 CATSPER2Q96P56 530 aa14.77□□□□□ -0.04
MSH5-201ENST00000375703 BTBD9Q96Q07 612 aa14.77□□□□□ -0.04
MSH5-201ENST00000375703 GCNAQ96QF7 691 aa14.77□□□□□ -0.04
MSH5-201ENST00000375703 SPATA16Q9BXB7 569 aa14.77□□□□□ -0.04
MSH5-201ENST00000375703 TSPYL2Q9H2G4 693 aaPredicted RBP14.77□□□□□ -0.04
MSH5-201ENST00000375703 TMEM30AQ9NV96 361 aa14.77□□□□□ -0.04
MSH5-201ENST00000375703 CDYLQ9Y232 598 aa14.77□□□□□ -0.04
MSH5-201ENST00000375703 DTNAQ9Y4J8 743 aa14.77□□□□□ -0.04
MSH5-201ENST00000375703 CAPN8A6NHC0 703 aa14.77□□□□□ -0.05
MSH5-201ENST00000375703 PIM1P11309 404 aaPredicted RBP14.77□□□□□ -0.05
MSH5-201ENST00000375703 PPARGP37231 505 aaPredicted RBP14.77□□□□□ -0.05
MSH5-201ENST00000375703 LHX1P48742 406 aa14.77□□□□□ -0.05
MSH5-201ENST00000375703 CXCR3P49682 368 aa14.77□□□□□ -0.05
MSH5-201ENST00000375703 ZNF135P52742 658 aaPredicted RBP14.77□□□□□ -0.05
MSH5-201ENST00000375703 RPL26P61254 145 aaKnown RBP14.77□□□□□ -0.05
MSH5-201ENST00000375703 CNPY1Q3B7I2 92 aa14.77□□□□□ -0.05
MSH5-201ENST00000375703 C11orf91Q3C1V1 193 aa14.77□□□□□ -0.05
MSH5-201ENST00000375703 PCID2Q5JVF3 399 aa14.77□□□□□ -0.05
MSH5-201ENST00000375703 LDLRAD1Q5T700 205 aa14.77□□□□□ -0.05
MSH5-201ENST00000375703 PKN3Q6P5Z2 889 aa14.77□□□□□ -0.05
MSH5-201ENST00000375703 BNC2Q6ZN30 1099 aaPredicted RBP14.77□□□□□ -0.05
MSH5-201ENST00000375703 SETD3Q86TU7 594 aaPredicted RBP14.77□□□□□ -0.05
MSH5-201ENST00000375703 RCN3Q96D15 328 aa14.77□□□□□ -0.05
MSH5-201ENST00000375703 PPP1R10Q96QC0 940 aaKnown RBP14.77□□□□□ -0.05
MSH5-201ENST00000375703 AAR2Q9Y312 384 aaKnown RBP14.77□□□□□ -0.05
MSH5-201ENST00000375703 BTBD19C9JJ37 291 aa14.76□□□□□ -0.05
MSH5-201ENST00000375703 SLC22A2O15244 555 aa14.76□□□□□ -0.05
MSH5-201ENST00000375703 DLX3O60479 287 aa14.76□□□□□ -0.05
MSH5-201ENST00000375703 SRGAP2BP0DMP2 458 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms