RNA–Protein interactions for RNA: ENST00000374198.4

PRPF4-201, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRPF4, Length 2,787 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-201ENST00000374198 TMEM161BQ8NDZ6 487 aa13.1□□□□□ -0.31
PRPF4-201ENST00000374198 CMASQ8NFW8 434 aaPredicted RBP13.1□□□□□ -0.31
PRPF4-201ENST00000374198 PNPT1Q8TCS8 783 aaKnown RBP13.1□□□□□ -0.31
PRPF4-201ENST00000374198 CYGBQ8WWM9 190 aa13.1□□□□□ -0.31
PRPF4-201ENST00000374198 SNX19Q92543 992 aa13.1□□□□□ -0.31
PRPF4-201ENST00000374198 FAM213AQ9BRX8 229 aa13.1□□□□□ -0.31
PRPF4-201ENST00000374198 KIFC3Q9BVG8 833 aa13.1□□□□□ -0.31
PRPF4-201ENST00000374198 AKIP1Q9NQ31 210 aa13.1□□□□□ -0.31
PRPF4-201ENST00000374198 THG1LQ9NWX6 298 aaKnown RBP13.1□□□□□ -0.31
PRPF4-201ENST00000374198 PCSK1NQ9UHG2 260 aa13.1□□□□□ -0.31
PRPF4-201ENST00000374198 SYNPO2Q9UMS6 1093 aa13.1□□□□□ -0.31
PRPF4-201ENST00000374198 HEATR9A2RTY3 570 aa13.1□□□□□ -0.31
PRPF4-201ENST00000374198 DDX39AO00148 427 aaKnown RBP13.1□□□□□ -0.31
PRPF4-201ENST00000374198 TRIM24O15164 1050 aa13.1□□□□□ -0.31
PRPF4-201ENST00000374198 NUAK1O60285 661 aa13.1□□□□□ -0.31
PRPF4-201ENST00000374198 PARNO95453 639 aaKnown RBP13.1□□□□□ -0.31
PRPF4-201ENST00000374198 LSM8O95777 96 aaKnown RBP13.1□□□□□ -0.31
PRPF4-201ENST00000374198 UGT2B4P06133 528 aa13.1□□□□□ -0.31
PRPF4-201ENST00000374198 JUNBP17275 347 aaPredicted RBP13.1□□□□□ -0.31
PRPF4-201ENST00000374198 MPSTP25325 297 aa13.1□□□□□ -0.31
PRPF4-201ENST00000374198 ENPEPQ07075 957 aa13.1□□□□□ -0.31
PRPF4-201ENST00000374198 TUBA3CQ13748 450 aa13.1□□□□□ -0.31
PRPF4-201ENST00000374198 PRKG1Q13976 671 aa13.1□□□□□ -0.31
PRPF4-201ENST00000374198 TAF5Q15542 800 aa13.1□□□□□ -0.31
PRPF4-201ENST00000374198 TDRD10Q5VZ19 366 aaKnown RBP13.1□□□□□ -0.31
PRPF4-201ENST00000374198 IQSEC1Q6DN90 963 aa13.1□□□□□ -0.31
PRPF4-201ENST00000374198 USP50Q70EL3 339 aaPredicted RBP13.1□□□□□ -0.31
PRPF4-201ENST00000374198 ZNF534Q76KX8 674 aa13.1□□□□□ -0.31
PRPF4-201ENST00000374198 BPIFB6Q8NFQ5 453 aa13.1□□□□□ -0.31
PRPF4-201ENST00000374198 TRIB2Q92519 343 aa13.1□□□□□ -0.31
PRPF4-201ENST00000374198 SEPT8Q92599 483 aa13.1□□□□□ -0.31
PRPF4-201ENST00000374198 MARK4Q96L34 752 aa13.1□□□□□ -0.31
PRPF4-201ENST00000374198 RMDN3Q96TC7 470 aa13.1□□□□□ -0.31
PRPF4-201ENST00000374198 YTHDF1Q9BYJ9 559 aaKnown RBP13.1□□□□□ -0.31
PRPF4-201ENST00000374198 UNC93B1Q9H1C4 597 aa13.1□□□□□ -0.31
PRPF4-201ENST00000374198 RSAD1Q9HA92 442 aa13.1□□□□□ -0.31
PRPF4-201ENST00000374198 FANCEQ9HB96 536 aa13.1□□□□□ -0.31
PRPF4-201ENST00000374198 ARMC1Q9NVT9 282 aa13.1□□□□□ -0.31
PRPF4-201ENST00000374198 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.1□□□□□ -0.31
PRPF4-201ENST00000374198 SFMBT1Q9UHJ3 866 aa13.1□□□□□ -0.31
PRPF4-201ENST00000374198 SCN9AQ15858 1988 aa13.1□□□□□ -0.31
PRPF4-201ENST00000374198 DYTNA2CJ06 578 aa13.09□□□□□ -0.31
PRPF4-201ENST00000374198 C4BPAP04003 597 aaKnown RBP13.09□□□□□ -0.31
PRPF4-201ENST00000374198 TYK2P29597 1187 aa13.09□□□□□ -0.31
PRPF4-201ENST00000374198 NR4A2P43354 598 aa13.09□□□□□ -0.31
PRPF4-201ENST00000374198 YAP1P46937 504 aaKnown RBP13.09□□□□□ -0.31
PRPF4-201ENST00000374198 LEPRP48357 1165 aaKnown RBP13.09□□□□□ -0.31
PRPF4-201ENST00000374198 NKX2-5P52952 324 aaPredicted RBP13.09□□□□□ -0.31
PRPF4-201ENST00000374198 AKAP14Q86UN6 197 aa13.09□□□□□ -0.31
PRPF4-201ENST00000374198 HEATR4Q86WZ0 1026 aa13.09□□□□□ -0.31
PRPF4-201ENST00000374198 EPHX4Q8IUS5 362 aa13.09□□□□□ -0.31
PRPF4-201ENST00000374198 OFCC1Q8IZS5 231 aa13.09□□□□□ -0.31
PRPF4-201ENST00000374198 CLIP4Q8N3C7 705 aa13.09□□□□□ -0.31
PRPF4-201ENST00000374198 SNX31Q8N9S9 440 aa13.09□□□□□ -0.31
PRPF4-201ENST00000374198 APBA2Q99767 749 aa13.09□□□□□ -0.31
PRPF4-201ENST00000374198 PCDH12Q9NPG4 1184 aa13.09□□□□□ -0.31
PRPF4-201ENST00000374198 TLL2Q9Y6L7 1015 aa13.09□□□□□ -0.31
PRPF4-201ENST00000374198 E2F8A0AVK6 867 aa13.09□□□□□ -0.31
PRPF4-201ENST00000374198 PRORSD1PA6NEY8 169 aa13.09□□□□□ -0.31
PRPF4-201ENST00000374198 G3V2L1 256 aa13.09□□□□□ -0.31
PRPF4-201ENST00000374198 VNN1O95497 513 aa13.09□□□□□ -0.31
PRPF4-201ENST00000374198 MBL2P11226 248 aaPredicted RBP13.09□□□□□ -0.31
PRPF4-201ENST00000374198 TNNI1P19237 187 aa13.09□□□□□ -0.31
PRPF4-201ENST00000374198 PTPN9P43378 593 aa13.09□□□□□ -0.31
PRPF4-201ENST00000374198 GTF2IP78347 998 aa13.09□□□□□ -0.31
PRPF4-201ENST00000374198 NIPAL4Q0D2K0 466 aa13.09□□□□□ -0.31
PRPF4-201ENST00000374198 RALGDSQ12967 914 aa13.09□□□□□ -0.31
PRPF4-201ENST00000374198 IKQ13123 557 aaPredicted RBP13.09□□□□□ -0.31
PRPF4-201ENST00000374198 MMRN1Q13201 1228 aa13.09□□□□□ -0.31
PRPF4-201ENST00000374198 MAP1SQ66K74 1059 aaPredicted RBP13.09□□□□□ -0.31
PRPF4-201ENST00000374198 NXNQ6DKJ4 435 aa13.09□□□□□ -0.31
PRPF4-201ENST00000374198 RNF19BQ6ZMZ0 732 aa13.09□□□□□ -0.31
PRPF4-201ENST00000374198 C15orf52Q6ZUT6 534 aaKnown RBP13.09□□□□□ -0.31
PRPF4-201ENST00000374198 GALNT13Q8IUC8 556 aa13.09□□□□□ -0.31
PRPF4-201ENST00000374198 KIAA2013Q8IYS2 634 aa13.09□□□□□ -0.31
PRPF4-201ENST00000374198 TMEM35BQ8NCS4 154 aa13.09□□□□□ -0.31
PRPF4-201ENST00000374198 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.09□□□□□ -0.31
PRPF4-201ENST00000374198 RTP4Q96DX8 246 aa13.09□□□□□ -0.31
PRPF4-201ENST00000374198 RNF38Q9H0F5 515 aa13.09□□□□□ -0.31
PRPF4-201ENST00000374198 MARCH7Q9H992 704 aa13.09□□□□□ -0.31
PRPF4-201ENST00000374198 NRP1O14786 923 aa13.09□□□□□ -0.31
PRPF4-201ENST00000374198 GRID2O43424 1007 aa13.09□□□□□ -0.31
PRPF4-201ENST00000374198 TRIM13O60858 407 aa13.09□□□□□ -0.31
PRPF4-201ENST00000374198 ALDH1A2O94788 518 aa13.09□□□□□ -0.31
PRPF4-201ENST00000374198 CHRNGP07510 517 aa13.09□□□□□ -0.31
PRPF4-201ENST00000374198 RPL14P50914 215 aaKnown RBP13.09□□□□□ -0.31
PRPF4-201ENST00000374198 GTF2IRD2BQ6EKJ0 949 aa13.09□□□□□ -0.31
PRPF4-201ENST00000374198 GTF2IRD2Q86UP8 949 aa13.09□□□□□ -0.31
PRPF4-201ENST00000374198 BPHLQ86WA6 291 aaPredicted RBP13.09□□□□□ -0.31
PRPF4-201ENST00000374198 ANKRD13AQ8IZ07 590 aa13.09□□□□□ -0.31
PRPF4-201ENST00000374198 PARP8Q8N3A8 854 aa13.09□□□□□ -0.31
PRPF4-201ENST00000374198 JOSD2Q8TAC2 188 aa13.09□□□□□ -0.31
PRPF4-201ENST00000374198 FAM110BQ8TC76 370 aa13.09□□□□□ -0.31
PRPF4-201ENST00000374198 CANT1Q8WVQ1 401 aa13.09□□□□□ -0.31
PRPF4-201ENST00000374198 BEGAINQ9BUH8 593 aa13.09□□□□□ -0.31
PRPF4-201ENST00000374198 ATP13A3Q9H7F0 1226 aa13.09□□□□□ -0.31
PRPF4-201ENST00000374198 DDX4Q9NQI0 724 aaKnown RBP13.09□□□□□ -0.31
PRPF4-201ENST00000374198 PKD2L2Q9NZM6 624 aa13.09□□□□□ -0.31
PRPF4-201ENST00000374198 ARHGAP28Q9P2N2 729 aa13.09□□□□□ -0.31
PRPF4-201ENST00000374198 RAP2CQ9Y3L5 183 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms