RNA–Protein interactions for RNA: ENST00000373711.3

CDKN1A-202, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDKN1A, Length 793 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-202ENST00000373711 KIAA1161Q6NSJ0 714 aa15.2■□□□□ 0.02
CDKN1A-202ENST00000373711 GUSBP11Q6P575 273 aa15.2■□□□□ 0.02
CDKN1A-202ENST00000373711 LURAP1LQ8IV03 231 aa15.2■□□□□ 0.02
CDKN1A-202ENST00000373711 TMIEQ8NEW7 156 aa15.2■□□□□ 0.02
CDKN1A-202ENST00000373711 ARRDC3Q96B67 414 aa15.2■□□□□ 0.02
CDKN1A-202ENST00000373711 PRR11Q96HE9 360 aaPredicted RBP15.2■□□□□ 0.02
CDKN1A-202ENST00000373711 POPDC2Q9HBU9 364 aa15.2■□□□□ 0.02
CDKN1A-202ENST00000373711 STARD5Q9NSY2 213 aa15.2■□□□□ 0.02
CDKN1A-202ENST00000373711 KIAA1468Q9P260 1216 aa15.2■□□□□ 0.02
CDKN1A-202ENST00000373711 XPO7Q9UIA9 1087 aaKnown RBP15.2■□□□□ 0.02
CDKN1A-202ENST00000373711 PCDHB4Q9Y5E5 795 aa15.2■□□□□ 0.02
CDKN1A-202ENST00000373711 SPTY2D1-AS1A0A0U1RR47 76 aa15.19■□□□□ 0.02
CDKN1A-202ENST00000373711 SLC16A3O15427 465 aaKnown RBP15.19■□□□□ 0.02
CDKN1A-202ENST00000373711 TRUB2O95900 331 aaKnown RBP15.19■□□□□ 0.02
CDKN1A-202ENST00000373711 FYNP06241 537 aa15.19■□□□□ 0.02
CDKN1A-202ENST00000373711 CHRNA3P32297 505 aa15.19■□□□□ 0.02
CDKN1A-202ENST00000373711 RECQLP46063 649 aaPredicted RBP15.19■□□□□ 0.02
CDKN1A-202ENST00000373711 CLDN2P57739 230 aa15.19■□□□□ 0.02
CDKN1A-202ENST00000373711 RPS21P63220 83 aaKnown RBP15.19■□□□□ 0.02
CDKN1A-202ENST00000373711 CBWD6Q4V339 395 aa15.19■□□□□ 0.02
CDKN1A-202ENST00000373711 ZNF542PQ5EBM4 170 aa15.19■□□□□ 0.02
CDKN1A-202ENST00000373711 CBWD3Q5JTY5 395 aa15.19■□□□□ 0.02
CDKN1A-202ENST00000373711 COLEC12Q5KU26 742 aa15.19■□□□□ 0.02
CDKN1A-202ENST00000373711 CBWD5Q5RIA9 395 aa15.19■□□□□ 0.02
CDKN1A-202ENST00000373711 CXorf57Q6NSI4 855 aaKnown RBP15.19■□□□□ 0.02
CDKN1A-202ENST00000373711 ERN2Q76MJ5 926 aaKnown RBP15.19■□□□□ 0.02
CDKN1A-202ENST00000373711 UBR7Q8N806 425 aa15.19■□□□□ 0.02
CDKN1A-202ENST00000373711 SPATA20Q8TB22 786 aa15.19■□□□□ 0.02
CDKN1A-202ENST00000373711 TFAP2BQ92481 460 aa15.19■□□□□ 0.02
CDKN1A-202ENST00000373711 LIN37Q96GY3 246 aaPredicted RBP15.19■□□□□ 0.02
CDKN1A-202ENST00000373711 CCDC34Q96HJ3 373 aa15.19■□□□□ 0.02
CDKN1A-202ENST00000373711 RPRD1AQ96P16 312 aaPredicted RBP15.19■□□□□ 0.02
CDKN1A-202ENST00000373711 NT5C1BQ96P26 610 aa15.19■□□□□ 0.02
CDKN1A-202ENST00000373711 MED15Q96RN5 788 aa15.19■□□□□ 0.02
CDKN1A-202ENST00000373711 FEM1AQ9BSK4 669 aa15.19■□□□□ 0.02
CDKN1A-202ENST00000373711 C2orf49Q9BVC5 232 aaPredicted RBP15.19■□□□□ 0.02
CDKN1A-202ENST00000373711 GPR27Q9NS67 375 aa15.19■□□□□ 0.02
CDKN1A-202ENST00000373711 SEPT10Q9P0V9 454 aa15.19■□□□□ 0.02
CDKN1A-202ENST00000373711 SPASTQ9UBP0 616 aa15.19■□□□□ 0.02
CDKN1A-202ENST00000373711 HOOK1Q9UJC3 728 aaKnown RBP15.19■□□□□ 0.02
CDKN1A-202ENST00000373711 HS3ST2Q9Y278 367 aa15.19■□□□□ 0.02
CDKN1A-202ENST00000373711 PCDHGA7Q9Y5G6 932 aa15.19■□□□□ 0.02
CDKN1A-202ENST00000373711 TLN1Q9Y490 2541 aaKnown RBP15.18■□□□□ 0.02
CDKN1A-202ENST00000373711 SYCE3A1L190 88 aa15.18■□□□□ 0.02
CDKN1A-202ENST00000373711 GABBR2O75899 941 aa15.18■□□□□ 0.02
CDKN1A-202ENST00000373711 BRD2P25440 801 aaKnown RBP15.18■□□□□ 0.02
CDKN1A-202ENST00000373711 CCR1P32246 355 aa15.18■□□□□ 0.02
CDKN1A-202ENST00000373711 NUMBP49757 651 aa15.18■□□□□ 0.02
CDKN1A-202ENST00000373711 CLCN6P51797 869 aa15.18■□□□□ 0.02
CDKN1A-202ENST00000373711 CETN1Q12798 172 aa15.18■□□□□ 0.02
CDKN1A-202ENST00000373711 ISM2Q6H9L7 571 aa15.18■□□□□ 0.02
CDKN1A-202ENST00000373711 OR6B2Q6IFH4 312 aa15.18■□□□□ 0.02
CDKN1A-202ENST00000373711 C14orf80Q86SX3 495 aa15.18■□□□□ 0.02
CDKN1A-202ENST00000373711 CIR1Q86X95 450 aaPredicted RBP15.18■□□□□ 0.02
CDKN1A-202ENST00000373711 EXD3Q8N9H8 876 aa15.18■□□□□ 0.02
CDKN1A-202ENST00000373711 ATP11CQ8NB49 1132 aa15.18■□□□□ 0.02
CDKN1A-202ENST00000373711 ZSCAN1Q8NBB4 408 aa15.18■□□□□ 0.02
CDKN1A-202ENST00000373711 SMARCE1Q969G3 411 aa15.18■□□□□ 0.02
CDKN1A-202ENST00000373711 FEM1CQ96JP0 617 aa15.18■□□□□ 0.02
CDKN1A-202ENST00000373711 NOX5Q96PH1 765 aa15.18■□□□□ 0.02
CDKN1A-202ENST00000373711 TSG101Q99816 390 aa15.18■□□□□ 0.02
CDKN1A-202ENST00000373711 SEMA3CQ99985 751 aa15.18■□□□□ 0.02
CDKN1A-202ENST00000373711 HDAC8Q9BY41 377 aa15.18■□□□□ 0.02
CDKN1A-202ENST00000373711 STRADBQ9C0K7 418 aa15.18■□□□□ 0.02
CDKN1A-202ENST00000373711 MUC3BQ9H195 1237 aa15.18■□□□□ 0.02
CDKN1A-202ENST00000373711 SYNDIG1Q9H7V2 258 aa15.18■□□□□ 0.02
CDKN1A-202ENST00000373711 FAM204AQ9H8W3 233 aa15.18■□□□□ 0.02
CDKN1A-202ENST00000373711 MAN1B1Q9UKM7 699 aa15.18■□□□□ 0.02
CDKN1A-202ENST00000373711 COL12A1Q99715 3063 aa15.18■□□□□ 0.02
CDKN1A-202ENST00000373711 A0A1W2PNU3 283 aaPredicted RBP15.17■□□□□ 0.02
CDKN1A-202ENST00000373711 BIN1O00499 593 aa15.17■□□□□ 0.02
CDKN1A-202ENST00000373711 FPGTO14772 594 aa15.17■□□□□ 0.02
CDKN1A-202ENST00000373711 PLD2O14939 933 aa15.17■□□□□ 0.02
CDKN1A-202ENST00000373711 MUSKO15146 869 aa15.17■□□□□ 0.02
CDKN1A-202ENST00000373711 PPFIA2O75334 1257 aa15.17■□□□□ 0.02
CDKN1A-202ENST00000373711 CLDN11O75508 207 aa15.17■□□□□ 0.02
CDKN1A-202ENST00000373711 LETM1O95202 739 aaPredicted RBP15.17■□□□□ 0.02
CDKN1A-202ENST00000373711 IGLV3-25P01717 112 aa15.17■□□□□ 0.02
CDKN1A-202ENST00000373711 AFPP02771 609 aaKnown RBP15.17■□□□□ 0.02
CDKN1A-202ENST00000373711 KRT10P13645 584 aa15.17■□□□□ 0.02
CDKN1A-202ENST00000373711 JUNDP17535 347 aa15.17■□□□□ 0.02
CDKN1A-202ENST00000373711 NEK3P51956 506 aa15.17■□□□□ 0.02
CDKN1A-202ENST00000373711 LRMPQ12912 555 aa15.17■□□□□ 0.02
CDKN1A-202ENST00000373711 MAPK8IP2Q13387 824 aaPredicted RBP15.17■□□□□ 0.02
CDKN1A-202ENST00000373711 PTK2BQ14289 1009 aa15.17■□□□□ 0.02
CDKN1A-202ENST00000373711 FZD2Q14332 565 aa15.17■□□□□ 0.02
CDKN1A-202ENST00000373711 DEFB133Q30KQ1 61 aa15.17■□□□□ 0.02
CDKN1A-202ENST00000373711 TMEM259Q4ZIN3 620 aa15.17■□□□□ 0.02
CDKN1A-202ENST00000373711 ESRP1Q6NXG1 681 aaKnown RBP15.17■□□□□ 0.02
CDKN1A-202ENST00000373711 JAMLQ86YT9 394 aa15.17■□□□□ 0.02
CDKN1A-202ENST00000373711 LMX1AQ8TE12 382 aa15.17■□□□□ 0.02
CDKN1A-202ENST00000373711 TBATAQ96M53 351 aa15.17■□□□□ 0.02
CDKN1A-202ENST00000373711 PRMT1Q99873 361 aaKnown RBP15.17■□□□□ 0.02
CDKN1A-202ENST00000373711 FUCA2Q9BTY2 467 aa15.17■□□□□ 0.02
CDKN1A-202ENST00000373711 SLC17A9Q9BYT1 436 aa15.17■□□□□ 0.02
CDKN1A-202ENST00000373711 ACSL6Q9UKU0 697 aa15.17■□□□□ 0.02
CDKN1A-202ENST00000373711 ZFR2Q9UPR6 939 aaKnown RBP15.17■□□□□ 0.02
CDKN1A-202ENST00000373711 SCN8AQ9UQD0 1980 aa15.16■□□□□ 0.02
CDKN1A-202ENST00000373711 SUV39H1O43463 412 aa15.16■□□□□ 0.02
CDKN1A-202ENST00000373711 SMC2O95347 1197 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 108.8 ms