RNA–Protein interactions for RNA: ENST00000372621.8

CTPS1-202, Transcript of CTP synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTPS1, Length 3,201 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1-202ENST00000372621 ST13P4Q8IZP2 240 aaPredicted RBP12.96□□□□□ -0.33
CTPS1-202ENST00000372621 CENPLQ8N0S6 344 aaPredicted RBP12.96□□□□□ -0.33
CTPS1-202ENST00000372621 DNAJB3Q8WWF6 145 aa12.96□□□□□ -0.33
CTPS1-202ENST00000372621 COLEC11Q9BWP8 271 aa12.96□□□□□ -0.33
CTPS1-202ENST00000372621 CNGB3Q9NQW8 809 aa12.96□□□□□ -0.33
CTPS1-202ENST00000372621 ACSS2Q9NR19 701 aa12.96□□□□□ -0.33
CTPS1-202ENST00000372621 NSMCE4AQ9NXX6 385 aa12.96□□□□□ -0.33
CTPS1-202ENST00000372621 MAGED2Q9UNF1 606 aaPredicted RBP12.96□□□□□ -0.33
CTPS1-202ENST00000372621 INPP5FQ9Y2H2 1132 aa12.96□□□□□ -0.33
CTPS1-202ENST00000372621 AIM2O14862 343 aa12.96□□□□□ -0.34
CTPS1-202ENST00000372621 PIGNO95427 931 aa12.96□□□□□ -0.34
CTPS1-202ENST00000372621 PABPC4LP0CB38 370 aaKnown RBP12.96□□□□□ -0.34
CTPS1-202ENST00000372621 DNAJB1P25685 340 aa12.96□□□□□ -0.34
CTPS1-202ENST00000372621 ADSLP30566 484 aaPredicted RBP12.96□□□□□ -0.34
CTPS1-202ENST00000372621 GSTT1P30711 240 aa12.96□□□□□ -0.34
CTPS1-202ENST00000372621 ALDH1A3P47895 512 aa12.96□□□□□ -0.34
CTPS1-202ENST00000372621 PGGT1BP53609 377 aa12.96□□□□□ -0.34
CTPS1-202ENST00000372621 PRKAA1Q13131 559 aa12.96□□□□□ -0.34
CTPS1-202ENST00000372621 IQSEC1Q6DN90 963 aa12.96□□□□□ -0.34
CTPS1-202ENST00000372621 SDCCAG8Q86SQ7 713 aaPredicted RBP12.96□□□□□ -0.34
CTPS1-202ENST00000372621 CNTN4Q8IWV2 1026 aa12.96□□□□□ -0.34
CTPS1-202ENST00000372621 PQLC1Q8N2U9 271 aa12.96□□□□□ -0.34
CTPS1-202ENST00000372621 KYQ8NBH2 561 aa12.96□□□□□ -0.34
CTPS1-202ENST00000372621 PPP1R10Q96QC0 940 aaKnown RBP12.96□□□□□ -0.34
CTPS1-202ENST00000372621 APBA2Q99767 749 aa12.96□□□□□ -0.34
CTPS1-202ENST00000372621 MED10Q9BTT4 135 aa12.96□□□□□ -0.34
CTPS1-202ENST00000372621 SNX10Q9Y5X0 201 aa12.96□□□□□ -0.34
CTPS1-202ENST00000372621 HHLA1C9JL84 531 aa12.95□□□□□ -0.34
CTPS1-202ENST00000372621 SNUPNO95149 360 aaKnown RBP12.95□□□□□ -0.34
CTPS1-202ENST00000372621 DNAJB2P25686 324 aa12.95□□□□□ -0.34
CTPS1-202ENST00000372621 PPARGP37231 505 aaPredicted RBP12.95□□□□□ -0.34
CTPS1-202ENST00000372621 RAB27AP51159 221 aa12.95□□□□□ -0.34
CTPS1-202ENST00000372621 PDK3Q15120 406 aa12.95□□□□□ -0.34
CTPS1-202ENST00000372621 MMEL1Q495T6 779 aa12.95□□□□□ -0.34
CTPS1-202ENST00000372621 CTU1Q7Z7A3 348 aaKnown RBP12.95□□□□□ -0.34
CTPS1-202ENST00000372621 CNTD1Q8N815 330 aa12.95□□□□□ -0.34
CTPS1-202ENST00000372621 GPR78Q96P69 363 aa12.95□□□□□ -0.34
CTPS1-202ENST00000372621 CENPKQ9BS16 269 aa12.95□□□□□ -0.34
CTPS1-202ENST00000372621 TRIM4Q9C037 500 aa12.95□□□□□ -0.34
CTPS1-202ENST00000372621 ABHD16BQ9H3Z7 469 aa12.95□□□□□ -0.34
CTPS1-202ENST00000372621 DDIT4Q9NX09 232 aa12.95□□□□□ -0.34
CTPS1-202ENST00000372621 UBP1Q9NZI7 540 aa12.95□□□□□ -0.34
CTPS1-202ENST00000372621 AP3B1O00203 1094 aa12.95□□□□□ -0.34
CTPS1-202ENST00000372621 NEMP1O14524 444 aa12.95□□□□□ -0.34
CTPS1-202ENST00000372621 CLGNO14967 610 aa12.95□□□□□ -0.34
CTPS1-202ENST00000372621 PHGDHO43175 533 aaKnown RBP12.95□□□□□ -0.34
CTPS1-202ENST00000372621 DENRO43583 198 aaKnown RBP12.95□□□□□ -0.34
CTPS1-202ENST00000372621 AHSGP02765 367 aa12.95□□□□□ -0.34
CTPS1-202ENST00000372621 JUNP05412 331 aaKnown RBP12.95□□□□□ -0.34
CTPS1-202ENST00000372621 USP17L7P0C7H9 530 aa12.95□□□□□ -0.34
CTPS1-202ENST00000372621 NCAM1P13591 858 aa12.95□□□□□ -0.34
CTPS1-202ENST00000372621 CXCR3P49682 368 aa12.95□□□□□ -0.34
CTPS1-202ENST00000372621 ZNF135P52742 658 aaPredicted RBP12.95□□□□□ -0.34
CTPS1-202ENST00000372621 THOP1P52888 689 aa12.95□□□□□ -0.34
CTPS1-202ENST00000372621 FOLH1Q04609 750 aa12.95□□□□□ -0.34
CTPS1-202ENST00000372621 HERC3Q15034 1050 aa12.95□□□□□ -0.34
CTPS1-202ENST00000372621 PM20D1Q6GTS8 502 aa12.95□□□□□ -0.34
CTPS1-202ENST00000372621 NAPEPLDQ6IQ20 393 aa12.95□□□□□ -0.34
CTPS1-202ENST00000372621 TMEM126BQ8IUX1 230 aa12.95□□□□□ -0.34
CTPS1-202ENST00000372621 FSTL5Q8N475 847 aaPredicted RBP12.95□□□□□ -0.34
CTPS1-202ENST00000372621 TSGA13Q96PP4 275 aa12.95□□□□□ -0.34
CTPS1-202ENST00000372621 NUF2Q9BZD4 464 aa12.95□□□□□ -0.34
CTPS1-202ENST00000372621 VTI1BQ9UEU0 232 aa12.95□□□□□ -0.34
CTPS1-202ENST00000372621 OR12D3Q9UGF7 316 aa12.95□□□□□ -0.34
CTPS1-202ENST00000372621 TLK1Q9UKI8 766 aa12.95□□□□□ -0.34
CTPS1-202ENST00000372621 PACSIN3Q9UKS6 424 aa12.95□□□□□ -0.34
CTPS1-202ENST00000372621 DDHD2O94830 711 aa12.94□□□□□ -0.34
CTPS1-202ENST00000372621 LRIG2O94898 1065 aa12.94□□□□□ -0.34
CTPS1-202ENST00000372621 JCHAINP01591 159 aa12.94□□□□□ -0.34
CTPS1-202ENST00000372621 COL6A2P12110 1019 aa12.94□□□□□ -0.34
CTPS1-202ENST00000372621 YBX3P16989 372 aaKnown RBP eCLIP12.94□□□□□ -0.343e-7■□□□□ 10.7
CTPS1-202ENST00000372621 NAGLUP54802 743 aa12.94□□□□□ -0.34
CTPS1-202ENST00000372621 SLC12A1Q13621 1099 aa12.94□□□□□ -0.34
CTPS1-202ENST00000372621 CYLC2Q14093 348 aaPredicted RBP12.94□□□□□ -0.34
CTPS1-202ENST00000372621 GRB14Q14449 540 aa12.94□□□□□ -0.34
CTPS1-202ENST00000372621 ARL13BQ3SXY8 428 aa12.94□□□□□ -0.34
CTPS1-202ENST00000372621 LDLRAD1Q5T700 205 aa12.94□□□□□ -0.34
CTPS1-202ENST00000372621 TMC7Q7Z402 723 aa12.94□□□□□ -0.34
CTPS1-202ENST00000372621 FAM35AQ86V20 835 aa12.94□□□□□ -0.34
CTPS1-202ENST00000372621 MFSD6LQ8IWD5 586 aa12.94□□□□□ -0.34
CTPS1-202ENST00000372621 MARVELD2Q8N4S9 558 aa12.94□□□□□ -0.34
CTPS1-202ENST00000372621 ICA1LQ8NDH6 482 aa12.94□□□□□ -0.34
CTPS1-202ENST00000372621 KCTD4Q8WVF5 259 aa12.94□□□□□ -0.34
CTPS1-202ENST00000372621 SERPINI1Q99574 410 aa12.94□□□□□ -0.34
CTPS1-202ENST00000372621 TINF2Q9BSI4 451 aa12.94□□□□□ -0.34
CTPS1-202ENST00000372621 NEU3Q9UQ49 428 aa12.94□□□□□ -0.34
CTPS1-202ENST00000372621 CAPN8A6NHC0 703 aa12.94□□□□□ -0.34
CTPS1-202ENST00000372621 SLCO1B7G3V0H7 640 aa12.94□□□□□ -0.34
CTPS1-202ENST00000372621 AP1G2O75843 785 aa12.94□□□□□ -0.34
CTPS1-202ENST00000372621 CAPNS1P04632 268 aa12.94□□□□□ -0.34
CTPS1-202ENST00000372621 DPP6P42658 865 aa12.94□□□□□ -0.34
CTPS1-202ENST00000372621 CHN2P52757 468 aa12.94□□□□□ -0.34
CTPS1-202ENST00000372621 ZNF33AQ06730 810 aa12.94□□□□□ -0.34
CTPS1-202ENST00000372621 TSTD2Q5T7W7 516 aa12.94□□□□□ -0.34
CTPS1-202ENST00000372621 OTOP3Q7RTS5 596 aa12.94□□□□□ -0.34
CTPS1-202ENST00000372621 SETD3Q86TU7 594 aaPredicted RBP12.94□□□□□ -0.34
CTPS1-202ENST00000372621 TICAM1Q8IUC6 712 aa12.94□□□□□ -0.34
CTPS1-202ENST00000372621 PCED1BQ96HM7 432 aa12.94□□□□□ -0.34
CTPS1-202ENST00000372621 PPP1R36Q96LQ0 422 aa12.94□□□□□ -0.34
CTPS1-202ENST00000372621 HAPLN3Q96S86 360 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms