RNA–Protein interactions for RNA: ENST00000371937.8

ATPAF1-202, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 1,827 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-202ENST00000371937 SMG9Q9H0W8 520 aaKnown RBP26.76■■□□□ 1.88
ATPAF1-202ENST00000371937 MUC3BQ9H195 1237 aa26.76■■□□□ 1.88
ATPAF1-202ENST00000371937 ACSS3Q9H6R3 686 aa26.76■■□□□ 1.88
ATPAF1-202ENST00000371937 ATP13A1Q9HD20 1204 aa26.76■■□□□ 1.88
ATPAF1-202ENST00000371937 UBP1Q9NZI7 540 aa26.76■■□□□ 1.88
ATPAF1-202ENST00000371937 DOCK6Q96HP0 2047 aa26.76■■□□□ 1.87
ATPAF1-202ENST00000371937 RANBP2P49792 3224 aaKnown RBP26.76■■□□□ 1.87
ATPAF1-202ENST00000371937 AGTP01019 485 aa26.76■■□□□ 1.87
ATPAF1-202ENST00000371937 RNF219Q5W0B1 726 aaPredicted RBP26.76■■□□□ 1.87
ATPAF1-202ENST00000371937 OR52K1Q8NGK4 314 aa26.76■■□□□ 1.87
ATPAF1-202ENST00000371937 SPATA22Q8NHS9 363 aa26.76■■□□□ 1.87
ATPAF1-202ENST00000371937 FBF1Q8TES7 1133 aa26.76■■□□□ 1.87
ATPAF1-202ENST00000371937 DDI1Q8WTU0 396 aa26.76■■□□□ 1.87
ATPAF1-202ENST00000371937 ACE2Q9BYF1 805 aaPredicted RBP26.76■■□□□ 1.87
ATPAF1-202ENST00000371937 BFARQ9NZS9 450 aa26.76■■□□□ 1.87
ATPAF1-202ENST00000371937 NOVA2Q9UNW9 492 aaKnown RBP26.76■■□□□ 1.87
ATPAF1-202ENST00000371937 MRPS23Q9Y3D9 190 aaKnown RBP26.76■■□□□ 1.87
ATPAF1-202ENST00000371937 PAPLNO95428 1278 aa26.75■■□□□ 1.87
ATPAF1-202ENST00000371937 ATP5DP30049 168 aa26.75■■□□□ 1.87
ATPAF1-202ENST00000371937 STX2P32856 288 aa26.75■■□□□ 1.87
ATPAF1-202ENST00000371937 ITKQ08881 620 aa26.75■■□□□ 1.87
ATPAF1-202ENST00000371937 MPP3Q13368 585 aa26.75■■□□□ 1.87
ATPAF1-202ENST00000371937 CDH18Q13634 790 aa26.75■■□□□ 1.87
ATPAF1-202ENST00000371937 CASC4Q6P4E1 433 aa26.75■■□□□ 1.87
ATPAF1-202ENST00000371937 TDRPQ86YL5 185 aa26.75■■□□□ 1.87
ATPAF1-202ENST00000371937 CCDC117Q8IWD4 279 aaPredicted RBP26.75■■□□□ 1.87
ATPAF1-202ENST00000371937 SH2D3CQ8N5H7 860 aa26.75■■□□□ 1.87
ATPAF1-202ENST00000371937 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP26.75■■□□□ 1.87
ATPAF1-202ENST00000371937 USP13Q92995 863 aaPredicted RBP26.75■■□□□ 1.87
ATPAF1-202ENST00000371937 CYTH2Q99418 400 aa26.75■■□□□ 1.87
ATPAF1-202ENST00000371937 SFXN1Q9H9B4 322 aa26.75■■□□□ 1.87
ATPAF1-202ENST00000371937 SLC24A2Q9UI40 661 aa26.75■■□□□ 1.87
ATPAF1-202ENST00000371937 CCL26Q9Y258 94 aa26.75■■□□□ 1.87
ATPAF1-202ENST00000371937 USP12O75317 370 aa26.74■■□□□ 1.87
ATPAF1-202ENST00000371937 MGAT1P26572 445 aa26.74■■□□□ 1.87
ATPAF1-202ENST00000371937 CDH17Q12864 832 aa26.74■■□□□ 1.87
ATPAF1-202ENST00000371937 ZNF235Q14590 738 aa26.74■■□□□ 1.87
ATPAF1-202ENST00000371937 RFTN1Q14699 578 aaPredicted RBP26.74■■□□□ 1.87
ATPAF1-202ENST00000371937 MPP5Q8N3R9 675 aa26.74■■□□□ 1.87
ATPAF1-202ENST00000371937 TLCD1Q96CP7 247 aa26.74■■□□□ 1.87
ATPAF1-202ENST00000371937 IMP4Q96G21 291 aaKnown RBP26.74■■□□□ 1.87
ATPAF1-202ENST00000371937 XPO6Q96QU8 1125 aaKnown RBP26.74■■□□□ 1.87
ATPAF1-202ENST00000371937 VPS45Q9NRW7 570 aa26.74■■□□□ 1.87
ATPAF1-202ENST00000371937 HELZP42694 1942 aaKnown RBP26.74■■□□□ 1.87
ATPAF1-202ENST00000371937 TCRBV9S1A1TA0A576 114 aa26.74■■□□□ 1.87
ATPAF1-202ENST00000371937 MT-CYBP00156 380 aaPredicted RBP26.74■■□□□ 1.87
ATPAF1-202ENST00000371937 CYBBP04839 570 aa26.74■■□□□ 1.87
ATPAF1-202ENST00000371937 NPY2RP49146 381 aa26.74■■□□□ 1.87
ATPAF1-202ENST00000371937 GEMIN4P57678 1058 aaKnown RBP26.74■■□□□ 1.87
ATPAF1-202ENST00000371937 SKIDA1Q1XH10 827 aa26.74■■□□□ 1.87
ATPAF1-202ENST00000371937 DZANK1Q9NVP4 752 aa26.74■■□□□ 1.87
ATPAF1-202ENST00000371937 SAMD15Q9P1V8 674 aa26.74■■□□□ 1.87
ATPAF1-202ENST00000371937 UBA2Q9UBT2 640 aaPredicted RBP26.74■■□□□ 1.87
ATPAF1-202ENST00000371937 LGALS13Q9UHV8 139 aa26.74■■□□□ 1.87
ATPAF1-202ENST00000371937 NOTCH4Q99466 2003 aa26.74■■□□□ 1.87
ATPAF1-202ENST00000371937 EPOPA6NHQ4 379 aa26.73■■□□□ 1.87
ATPAF1-202ENST00000371937 BMP8BP34820 402 aa26.73■■□□□ 1.87
ATPAF1-202ENST00000371937 KCNC3Q14003 757 aa26.73■■□□□ 1.87
ATPAF1-202ENST00000371937 RASA2Q15283 850 aa26.73■■□□□ 1.87
ATPAF1-202ENST00000371937 UNC5AQ6ZN44 842 aa26.73■■□□□ 1.87
ATPAF1-202ENST00000371937 IPMKQ8NFU5 416 aa26.73■■□□□ 1.87
ATPAF1-202ENST00000371937 MRPL38Q96DV4 380 aaKnown RBP26.73■■□□□ 1.87
ATPAF1-202ENST00000371937 TBL1YQ9BQ87 522 aa26.73■■□□□ 1.87
ATPAF1-202ENST00000371937 POLR1EQ9GZS1 481 aaKnown RBP26.73■■□□□ 1.87
ATPAF1-202ENST00000371937 PIH1D1Q9NWS0 290 aaKnown RBP26.73■■□□□ 1.87
ATPAF1-202ENST00000371937 SEPT3Q9UH03 358 aa26.73■■□□□ 1.87
ATPAF1-202ENST00000371937 TRANK1O15050 2925 aa26.73■■□□□ 1.87
ATPAF1-202ENST00000371937 POC1B-GALNT4F8VUJ3 575 aa26.72■■□□□ 1.87
ATPAF1-202ENST00000371937 PGAM1P18669 254 aa26.72■■□□□ 1.87
ATPAF1-202ENST00000371937 OLIG2Q13516 323 aa26.72■■□□□ 1.87
ATPAF1-202ENST00000371937 TNFAIP8L3Q5GJ75 292 aa26.72■■□□□ 1.87
ATPAF1-202ENST00000371937 MFN1Q8IWA4 741 aa26.72■■□□□ 1.87
ATPAF1-202ENST00000371937 GSDMBQ8TAX9 411 aa26.72■■□□□ 1.87
ATPAF1-202ENST00000371937 FSD1LQ9BXM9 530 aa26.72■■□□□ 1.87
ATPAF1-202ENST00000371937 MAGEB16A2A368 324 aa26.72■■□□□ 1.87
ATPAF1-202ENST00000371937 CBX4O00257 560 aa26.72■■□□□ 1.87
ATPAF1-202ENST00000371937 TCF3P15923 654 aa26.72■■□□□ 1.87
ATPAF1-202ENST00000371937 NR1D1P20393 614 aa26.72■■□□□ 1.87
ATPAF1-202ENST00000371937 MAGOHP61326 146 aaKnown RBP26.72■■□□□ 1.87
ATPAF1-202ENST00000371937 FSCBQ5H9T9 825 aa26.72■■□□□ 1.87
ATPAF1-202ENST00000371937 TMC5Q6UXY8 1006 aa26.72■■□□□ 1.87
ATPAF1-202ENST00000371937 LEKR1Q6ZMV7 388 aa26.72■■□□□ 1.87
ATPAF1-202ENST00000371937 C12orf76Q8N812 135 aaPredicted RBP26.72■■□□□ 1.87
ATPAF1-202ENST00000371937 FEM1AQ9BSK4 669 aa26.72■■□□□ 1.87
ATPAF1-202ENST00000371937 IL22Q9GZX6 179 aa26.72■■□□□ 1.87
ATPAF1-202ENST00000371937 SYBUQ9NX95 663 aa26.72■■□□□ 1.87
ATPAF1-202ENST00000371937 TBC1D14Q9P2M4 693 aa26.72■■□□□ 1.87
ATPAF1-202ENST00000371937 ADAM21Q9UKJ8 722 aa26.72■■□□□ 1.87
ATPAF1-202ENST00000371937 CEBPBP17676 345 aa26.71■■□□□ 1.87
ATPAF1-202ENST00000371937 GYS2P54840 703 aa26.71■■□□□ 1.87
ATPAF1-202ENST00000371937 MAXP61244 160 aa26.71■■□□□ 1.87
ATPAF1-202ENST00000371937 CYS1Q717R9 158 aa26.71■■□□□ 1.87
ATPAF1-202ENST00000371937 PRPF39Q86UA1 669 aaKnown RBP26.71■■□□□ 1.87
ATPAF1-202ENST00000371937 TDHQ8IZJ6 230 aa26.71■■□□□ 1.87
ATPAF1-202ENST00000371937 VPS28Q9UK41 221 aa26.71■■□□□ 1.87
ATPAF1-202ENST00000371937 ATG2AQ2TAZ0 1938 aa26.7■■□□□ 1.87
ATPAF1-202ENST00000371937 PMPCBO75439 489 aa26.7■■□□□ 1.87
ATPAF1-202ENST00000371937 ADRA1AP35348 466 aa26.7■■□□□ 1.87
ATPAF1-202ENST00000371937 CRADDP78560 199 aa26.7■■□□□ 1.87
ATPAF1-202ENST00000371937 STEAP4Q687X5 459 aa26.7■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms