RNA–Protein interactions for RNA: ENST00000366897.5

PRKN-205, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 2,877 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-205ENST00000366897 CTU1Q7Z7A3 348 aaKnown RBP13.8□□□□□ -0.2
PRKN-205ENST00000366897 CLEC14AQ86T13 490 aa13.8□□□□□ -0.2
PRKN-205ENST00000366897 KCNMB4Q86W47 210 aa13.8□□□□□ -0.2
PRKN-205ENST00000366897 SLC41A1Q8IVJ1 513 aa13.8□□□□□ -0.2
PRKN-205ENST00000366897 LSMEM2Q8N112 164 aa13.8□□□□□ -0.2
PRKN-205ENST00000366897 DNERQ8NFT8 737 aa13.8□□□□□ -0.2
PRKN-205ENST00000366897 DIS3LQ8TF46 1054 aaKnown RBP13.8□□□□□ -0.2
PRKN-205ENST00000366897 FAM167AQ96KS9 214 aa13.8□□□□□ -0.2
PRKN-205ENST00000366897 TMEM79Q9BSE2 394 aa13.8□□□□□ -0.2
PRKN-205ENST00000366897 DCUN1D5Q9BTE7 237 aa13.8□□□□□ -0.2
PRKN-205ENST00000366897 PHIPQ8WWQ0 1821 aa13.8□□□□□ -0.2
PRKN-205ENST00000366897 ARHGAP10A1A4S6 786 aa13.8□□□□□ -0.2
PRKN-205ENST00000366897 ETFBP38117 255 aa13.8□□□□□ -0.2
PRKN-205ENST00000366897 DCTN2Q13561 401 aaKnown RBP13.8□□□□□ -0.2
PRKN-205ENST00000366897 USP10Q14694 798 aaKnown RBP13.8□□□□□ -0.2
PRKN-205ENST00000366897 DEFB115Q30KQ5 88 aa13.8□□□□□ -0.2
PRKN-205ENST00000366897 SH3D19Q5HYK7 790 aa13.8□□□□□ -0.2
PRKN-205ENST00000366897 ZFP1Q6P2D0 407 aa13.8□□□□□ -0.2
PRKN-205ENST00000366897 KLHL35Q6PF15 583 aa13.8□□□□□ -0.2
PRKN-205ENST00000366897 LPCAT2Q7L5N7 544 aa13.8□□□□□ -0.2
PRKN-205ENST00000366897 SAPCD2Q86UD0 394 aa13.8□□□□□ -0.2
PRKN-205ENST00000366897 ZMAT2Q96NC0 199 aaKnown RBP13.8□□□□□ -0.2
PRKN-205ENST00000366897 SFMBT1Q9UHJ3 866 aa13.8□□□□□ -0.2
PRKN-205ENST00000366897 ZBTB24O43167 697 aaPredicted RBP13.79□□□□□ -0.2
PRKN-205ENST00000366897 TFPTP0C1Z6 253 aa13.79□□□□□ -0.2
PRKN-205ENST00000366897 SH3BGRP55822 239 aaPredicted RBP13.79□□□□□ -0.2
PRKN-205ENST00000366897 RPL26P61254 145 aaKnown RBP13.79□□□□□ -0.2
PRKN-205ENST00000366897 SPANXN3Q5MJ09 141 aa13.79□□□□□ -0.2
PRKN-205ENST00000366897 SH2D4BQ5SQS7 431 aa13.79□□□□□ -0.2
PRKN-205ENST00000366897 ITPRIPL1Q6GPH6 555 aa13.79□□□□□ -0.2
PRKN-205ENST00000366897 CHERPQ8IWX8 916 aaKnown RBP13.79□□□□□ -0.2
PRKN-205ENST00000366897 FSTL5Q8N475 847 aaPredicted RBP13.79□□□□□ -0.2
PRKN-205ENST00000366897 TMEM151AQ8N4L1 468 aa13.79□□□□□ -0.2
PRKN-205ENST00000366897 PPWD1Q96BP3 646 aaKnown RBP13.79□□□□□ -0.2
PRKN-205ENST00000366897 C11orf84Q9BUA3 381 aaPredicted RBP13.79□□□□□ -0.2
PRKN-205ENST00000366897 NOL11Q9H8H0 719 aaKnown RBP13.79□□□□□ -0.2
PRKN-205ENST00000366897 LRRC40Q9H9A6 602 aa13.79□□□□□ -0.2
PRKN-205ENST00000366897 EFCAB1Q9HAE3 211 aa13.79□□□□□ -0.2
PRKN-205ENST00000366897 ZBTB26Q9HCK0 441 aa13.79□□□□□ -0.2
PRKN-205ENST00000366897 CYP4F12Q9HCS2 524 aa13.79□□□□□ -0.2
PRKN-205ENST00000366897 PDGFCQ9NRA1 345 aa13.79□□□□□ -0.2
PRKN-205ENST00000366897 HOXC10Q9NYD6 342 aa13.79□□□□□ -0.2
PRKN-205ENST00000366897 GTSE1Q9NYZ3 720 aa13.79□□□□□ -0.2
PRKN-205ENST00000366897 XPR1Q9UBH6 696 aa13.79□□□□□ -0.2
PRKN-205ENST00000366897 TLK1Q9UKI8 766 aa13.79□□□□□ -0.2
PRKN-205ENST00000366897 SNX10Q9Y5X0 201 aa13.79□□□□□ -0.2
PRKN-205ENST00000366897 TMEM114B3SHH9 223 aa13.79□□□□□ -0.2
PRKN-205ENST00000366897 ZSCAN9O15535 394 aaPredicted RBP13.79□□□□□ -0.2
PRKN-205ENST00000366897 UGT1A6P19224 532 aa13.79□□□□□ -0.2
PRKN-205ENST00000366897 MAGEA12P43365 314 aa13.79□□□□□ -0.2
PRKN-205ENST00000366897 NDUFV1P49821 464 aa13.79□□□□□ -0.2
PRKN-205ENST00000366897 TMEM62Q0P6H9 643 aa13.79□□□□□ -0.2
PRKN-205ENST00000366897 CTBP1Q13363 440 aa13.79□□□□□ -0.2
PRKN-205ENST00000366897 PDAP1Q13442 181 aaKnown RBP13.79□□□□□ -0.2
PRKN-205ENST00000366897 LPIN1Q14693 890 aa13.79□□□□□ -0.2
PRKN-205ENST00000366897 PPP1R3AQ16821 1122 aa13.79□□□□□ -0.2
PRKN-205ENST00000366897 KRT80Q6KB66 452 aa13.79□□□□□ -0.2
PRKN-205ENST00000366897 CNDP1Q96KN2 507 aa13.79□□□□□ -0.2
PRKN-205ENST00000366897 SLC2A11Q9BYW1 496 aa13.79□□□□□ -0.2
PRKN-205ENST00000366897 DRC3Q9H069 523 aa13.79□□□□□ -0.2
PRKN-205ENST00000366897 VRTNQ9H8Y1 702 aa13.79□□□□□ -0.2
PRKN-205ENST00000366897 TMEM165Q9HC07 324 aa13.79□□□□□ -0.2
PRKN-205ENST00000366897 BFARQ9NZS9 450 aa13.79□□□□□ -0.2
PRKN-205ENST00000366897 CCDC167Q9P0B6 97 aa13.79□□□□□ -0.2
PRKN-205ENST00000366897 RSL24D1Q9UHA3 163 aaKnown RBP13.79□□□□□ -0.2
PRKN-205ENST00000366897 PARP14Q460N5 1801 aa13.79□□□□□ -0.2
PRKN-205ENST00000366897 TRPM7Q96QT4 1865 aa13.78□□□□□ -0.2
PRKN-205ENST00000366897 DLX3O60479 287 aa13.78□□□□□ -0.2
PRKN-205ENST00000366897 TIPRLO75663 272 aa13.78□□□□□ -0.2
PRKN-205ENST00000366897 SEC24DO94855 1032 aaPredicted RBP13.78□□□□□ -0.2
PRKN-205ENST00000366897 SOX11P35716 441 aa13.78□□□□□ -0.2
PRKN-205ENST00000366897 PTPN9P43378 593 aa13.78□□□□□ -0.2
PRKN-205ENST00000366897 VEGFBP49765 207 aa13.78□□□□□ -0.2
PRKN-205ENST00000366897 PLK1P53350 603 aa13.78□□□□□ -0.2
PRKN-205ENST00000366897 PSME3P61289 254 aa13.78□□□□□ -0.2
PRKN-205ENST00000366897 NSUN2Q08J23 767 aaKnown RBP eCLIP13.78□□□□□ -0.2
PRKN-205ENST00000366897 IKBKEQ14164 716 aa13.78□□□□□ -0.2
PRKN-205ENST00000366897 SYPL2Q5VXT5 272 aa13.78□□□□□ -0.2
PRKN-205ENST00000366897 LIPMQ5VYY2 423 aa13.78□□□□□ -0.2
PRKN-205ENST00000366897 DENND6AQ8IWF6 608 aa13.78□□□□□ -0.2
PRKN-205ENST00000366897 OR9I1Q8NGQ6 314 aa13.78□□□□□ -0.2
PRKN-205ENST00000366897 SLC2A14Q8TDB8 520 aa13.78□□□□□ -0.2
PRKN-205ENST00000366897 USP33Q8TEY7 942 aa13.78□□□□□ -0.2
PRKN-205ENST00000366897 SREK1Q8WXA9 508 aaKnown RBP13.78□□□□□ -0.2
PRKN-205ENST00000366897 ARHGEF38Q9NXL2 777 aa13.78□□□□□ -0.2
PRKN-205ENST00000366897 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.78□□□□□ -0.23e-11■■■■■ 81.1
PRKN-205ENST00000366897 AP4S1Q9Y587 144 aa13.78□□□□□ -0.2
PRKN-205ENST00000366897 CLDN5O00501 218 aa13.78□□□□□ -0.2
PRKN-205ENST00000366897 TPST1O60507 370 aa13.78□□□□□ -0.2
PRKN-205ENST00000366897 ATP6V1G1O75348 118 aa13.78□□□□□ -0.2
PRKN-205ENST00000366897 GNAO1P09471 354 aa13.78□□□□□ -0.2
PRKN-205ENST00000366897 INSRRP14616 1297 aa13.78□□□□□ -0.2
PRKN-205ENST00000366897 ENTPD1P49961 510 aa13.78□□□□□ -0.2
PRKN-205ENST00000366897 ANKDD1AQ495B1 522 aa13.78□□□□□ -0.2
PRKN-205ENST00000366897 SLC26A9Q7LBE3 791 aa13.78□□□□□ -0.2
PRKN-205ENST00000366897 KDELC2Q7Z4H8 507 aa13.78□□□□□ -0.2
PRKN-205ENST00000366897 CATSPER1Q8NEC5 780 aa13.78□□□□□ -0.2
PRKN-205ENST00000366897 LPGAT1Q92604 370 aa13.78□□□□□ -0.2
PRKN-205ENST00000366897 CENPIQ92674 756 aaPredicted RBP13.78□□□□□ -0.2
PRKN-205ENST00000366897 NXNL1Q96CM4 212 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms