RNA–Protein interactions for RNA: ENST00000344586.8

NKX2-3-201, Transcript of NK2 homeobox 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene NKX2-3, Length 2,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-3-201ENST00000344586 RNF39Q9H2S5 420 aa23.49■■□□□ 1.35
NKX2-3-201ENST00000344586 RHOJQ9H4E5 214 aa23.49■■□□□ 1.35
NKX2-3-201ENST00000344586 CCDC78A2IDD5 438 aa23.48■■□□□ 1.35
NKX2-3-201ENST00000344586 MMP3P08254 477 aa23.48■■□□□ 1.35
NKX2-3-201ENST00000344586 SAT1P21673 171 aa23.48■■□□□ 1.35
NKX2-3-201ENST00000344586 MSX2P35548 267 aaPredicted RBP23.48■■□□□ 1.35
NKX2-3-201ENST00000344586 HCAR3P49019 387 aa23.48■■□□□ 1.35
NKX2-3-201ENST00000344586 RABGGTBP53611 331 aa23.48■■□□□ 1.35
NKX2-3-201ENST00000344586 CNGA3Q16281 694 aa23.48■■□□□ 1.35
NKX2-3-201ENST00000344586 SPATA24Q86W54 205 aa23.48■■□□□ 1.35
NKX2-3-201ENST00000344586 BHLHE22Q8NFJ8 381 aaPredicted RBP23.48■■□□□ 1.35
NKX2-3-201ENST00000344586 USP13Q92995 863 aaPredicted RBP23.48■■□□□ 1.35
NKX2-3-201ENST00000344586 MARK4Q96L34 752 aa23.48■■□□□ 1.35
NKX2-3-201ENST00000344586 PRICKLE1Q96MT3 831 aaPredicted RBP23.48■■□□□ 1.35
NKX2-3-201ENST00000344586 APBA2Q99767 749 aa23.48■■□□□ 1.35
NKX2-3-201ENST00000344586 ZBTB26Q9HCK0 441 aa23.48■■□□□ 1.35
NKX2-3-201ENST00000344586 UBP1Q9NZI7 540 aa23.48■■□□□ 1.35
NKX2-3-201ENST00000344586 VTI1BQ9UEU0 232 aa23.48■■□□□ 1.35
NKX2-3-201ENST00000344586 RAB26Q9ULW5 256 aa23.48■■□□□ 1.35
NKX2-3-201ENST00000344586 PCDHGB4Q9UN71 923 aa23.48■■□□□ 1.35
NKX2-3-201ENST00000344586 PCDHGB5Q9Y5G0 923 aa23.48■■□□□ 1.35
NKX2-3-201ENST00000344586 TARM1B6A8C7 271 aa23.48■■□□□ 1.35
NKX2-3-201ENST00000344586 MTSS1O43312 755 aa23.48■■□□□ 1.35
NKX2-3-201ENST00000344586 SPATA31D3P0C874 917 aa23.48■■□□□ 1.35
NKX2-3-201ENST00000344586 KCNE1P15382 129 aa23.48■■□□□ 1.35
NKX2-3-201ENST00000344586 PTPN1P18031 435 aaKnown RBP23.48■■□□□ 1.35
NKX2-3-201ENST00000344586 ADSLP30566 484 aaPredicted RBP23.48■■□□□ 1.35
NKX2-3-201ENST00000344586 AVPR1AP37288 418 aa23.48■■□□□ 1.35
NKX2-3-201ENST00000344586 BAG6P46379 1132 aa23.48■■□□□ 1.35
NKX2-3-201ENST00000344586 MAP3K7CLP57077 242 aa23.48■■□□□ 1.35
NKX2-3-201ENST00000344586 LILRA4P59901 499 aa23.48■■□□□ 1.35
NKX2-3-201ENST00000344586 CCNA1P78396 465 aa23.48■■□□□ 1.35
NKX2-3-201ENST00000344586 MS4A2Q01362 244 aa23.48■■□□□ 1.35
NKX2-3-201ENST00000344586 USP10Q14694 798 aaKnown RBP23.48■■□□□ 1.35
NKX2-3-201ENST00000344586 SPATA31D4Q6ZUB0 917 aa23.48■■□□□ 1.35
NKX2-3-201ENST00000344586 SULF1Q8IWU6 871 aa23.48■■□□□ 1.35
NKX2-3-201ENST00000344586 ANKRD13AQ8IZ07 590 aa23.48■■□□□ 1.35
NKX2-3-201ENST00000344586 CENPLQ8N0S6 344 aaPredicted RBP23.48■■□□□ 1.35
NKX2-3-201ENST00000344586 LILRA2Q8N149 483 aa23.48■■□□□ 1.35
NKX2-3-201ENST00000344586 SCYL1Q96KG9 808 aa23.48■■□□□ 1.35
NKX2-3-201ENST00000344586 NDNQ99608 321 aa23.48■■□□□ 1.35
NKX2-3-201ENST00000344586 ULBP1Q9BZM6 244 aa23.48■■□□□ 1.35
NKX2-3-201ENST00000344586 BRD8Q9H0E9 1235 aa23.48■■□□□ 1.35
NKX2-3-201ENST00000344586 Q9H521 79 aa23.48■■□□□ 1.35
NKX2-3-201ENST00000344586 WDR41Q9HAD4 459 aa23.48■■□□□ 1.35
NKX2-3-201ENST00000344586 CDKN2AIPQ9NXV6 580 aaPredicted RBP23.48■■□□□ 1.35
NKX2-3-201ENST00000344586 FBXW11Q9UKB1 542 aa23.48■■□□□ 1.35
NKX2-3-201ENST00000344586 ZNF236Q9UL36 1845 aa23.47■■□□□ 1.35
NKX2-3-201ENST00000344586 YJEFN3A6XGL0 299 aa23.47■■□□□ 1.35
NKX2-3-201ENST00000344586 HOXD8P13378 290 aaPredicted RBP23.47■■□□□ 1.35
NKX2-3-201ENST00000344586 ENO3P13929 434 aaPredicted RBP23.47■■□□□ 1.35
NKX2-3-201ENST00000344586 DARSP14868 501 aaKnown RBP23.47■■□□□ 1.35
NKX2-3-201ENST00000344586 GABRB3P28472 473 aa23.47■■□□□ 1.35
NKX2-3-201ENST00000344586 XKR4Q5GH76 650 aa23.47■■□□□ 1.35
NKX2-3-201ENST00000344586 INTS6LQ5JSJ4 861 aaKnown RBP23.47■■□□□ 1.35
NKX2-3-201ENST00000344586 KIAA0319Q5VV43 1072 aa23.47■■□□□ 1.35
NKX2-3-201ENST00000344586 LRRC8EQ6NSJ5 796 aa23.47■■□□□ 1.35
NKX2-3-201ENST00000344586 SLC41A1Q8IVJ1 513 aa23.47■■□□□ 1.35
NKX2-3-201ENST00000344586 FSTL5Q8N475 847 aaPredicted RBP23.47■■□□□ 1.35
NKX2-3-201ENST00000344586 TOP6BLQ8N6T0 577 aa23.47■■□□□ 1.35
NKX2-3-201ENST00000344586 PPP1R13LQ8WUF5 828 aa23.47■■□□□ 1.35
NKX2-3-201ENST00000344586 TSNARE1Q96NA8 513 aa23.47■■□□□ 1.35
NKX2-3-201ENST00000344586 COPS7BQ9H9Q2 264 aaPredicted RBP23.47■■□□□ 1.35
NKX2-3-201ENST00000344586 RUVBL2Q9Y230 463 aaKnown RBP23.47■■□□□ 1.35
NKX2-3-201ENST00000344586 SLCO1B7G3V0H7 640 aa23.47■■□□□ 1.35
NKX2-3-201ENST00000344586 TADA2AO75478 443 aa23.47■■□□□ 1.35
NKX2-3-201ENST00000344586 DDHD2O94830 711 aa23.47■■□□□ 1.35
NKX2-3-201ENST00000344586 CDH17Q12864 832 aa23.47■■□□□ 1.35
NKX2-3-201ENST00000344586 DPF3Q92784 378 aa23.47■■□□□ 1.35
NKX2-3-201ENST00000344586 TEKT5Q96M29 485 aa23.47■■□□□ 1.35
NKX2-3-201ENST00000344586 KIFC1Q9BW19 673 aa23.47■■□□□ 1.35
NKX2-3-201ENST00000344586 NSMCE4AQ9NXX6 385 aa23.47■■□□□ 1.35
NKX2-3-201ENST00000344586 NDUFA13Q9P0J0 144 aa23.47■■□□□ 1.35
NKX2-3-201ENST00000344586 SNX10Q9Y5X0 201 aa23.47■■□□□ 1.35
NKX2-3-201ENST00000344586 AP4B1Q9Y6B7 739 aa23.47■■□□□ 1.35
NKX2-3-201ENST00000344586 STX16-NPEPL1H3BU86 382 aa23.46■■□□□ 1.35
NKX2-3-201ENST00000344586 CFLARO15519 480 aa23.46■■□□□ 1.35
NKX2-3-201ENST00000344586 DAOAP59103 153 aa23.46■■□□□ 1.35
NKX2-3-201ENST00000344586 SLC12A1Q13621 1099 aa23.46■■□□□ 1.35
NKX2-3-201ENST00000344586 PDCD2Q16342 344 aaPredicted RBP23.46■■□□□ 1.35
NKX2-3-201ENST00000344586 NXNQ6DKJ4 435 aa23.46■■□□□ 1.35
NKX2-3-201ENST00000344586 LCA5Q86VQ0 697 aa23.46■■□□□ 1.35
NKX2-3-201ENST00000344586 RNF148Q8N7C7 305 aa23.46■■□□□ 1.35
NKX2-3-201ENST00000344586 ZSCAN18Q8TBC5 510 aaPredicted RBP23.46■■□□□ 1.35
NKX2-3-201ENST00000344586 DCPSQ96C86 337 aaKnown RBP23.46■■□□□ 1.35
NKX2-3-201ENST00000344586 MED10Q9BTT4 135 aa23.46■■□□□ 1.35
NKX2-3-201ENST00000344586 XPR1Q9UBH6 696 aa23.46■■□□□ 1.35
NKX2-3-201ENST00000344586 PIN4Q9Y237 131 aaKnown RBP23.46■■□□□ 1.35
NKX2-3-201ENST00000344586 COPG1Q9Y678 874 aaKnown RBP23.46■■□□□ 1.35
NKX2-3-201ENST00000344586 PRSS51A0A1B0GVH4 220 aa23.45■■□□□ 1.35
NKX2-3-201ENST00000344586 C9IYK1 514 aa23.45■■□□□ 1.35
NKX2-3-201ENST00000344586 XPOTO43592 962 aaKnown RBP23.45■■□□□ 1.35
NKX2-3-201ENST00000344586 DLX3O60479 287 aa23.45■■□□□ 1.35
NKX2-3-201ENST00000344586 BCAS2O75934 225 aaPredicted RBP23.45■■□□□ 1.35
NKX2-3-201ENST00000344586 TFAP2AP05549 437 aa23.45■■□□□ 1.35
NKX2-3-201ENST00000344586 GJA9P57773 515 aa23.45■■□□□ 1.35
NKX2-3-201ENST00000344586 PPP2R5DQ14738 602 aa23.45■■□□□ 1.35
NKX2-3-201ENST00000344586 ISLR2Q6UXK2 745 aa23.45■■□□□ 1.35
NKX2-3-201ENST00000344586 GPRIN1Q7Z2K8 1008 aa23.45■■□□□ 1.35
NKX2-3-201ENST00000344586 CATSPER1Q8NEC5 780 aa23.45■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms