RNA–Protein interactions for RNA: ENST00000342503.8

RTN1-202, Transcript of reticulon 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RTN1, Length 1,703 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-202ENST00000342503 ALPK3Q96L96 1907 aa20.33■□□□□ 0.85
RTN1-202ENST00000342503 CTSAP10619 480 aa20.33■□□□□ 0.84
RTN1-202ENST00000342503 ADRA1DP25100 572 aa20.33■□□□□ 0.84
RTN1-202ENST00000342503 CNTFP26441 200 aa20.33■□□□□ 0.84
RTN1-202ENST00000342503 CCNFP41002 786 aa20.33■□□□□ 0.84
RTN1-202ENST00000342503 CREMQ03060 361 aa20.33■□□□□ 0.84
RTN1-202ENST00000342503 ITKQ08881 620 aa20.33■□□□□ 0.84
RTN1-202ENST00000342503 SF3A3Q12874 501 aaKnown RBP eCLIP20.33■□□□□ 0.84
RTN1-202ENST00000342503 MICALCLQ6ZW33 695 aa20.33■□□□□ 0.84
RTN1-202ENST00000342503 MFSD3Q96ES6 412 aa20.33■□□□□ 0.84
RTN1-202ENST00000342503 ZFATQ9P243 1243 aa20.33■□□□□ 0.84
RTN1-202ENST00000342503 PSAT1Q9Y617 370 aa20.33■□□□□ 0.84
RTN1-202ENST00000342503 F11P03951 625 aa20.32■□□□□ 0.84
RTN1-202ENST00000342503 CNPP09543 421 aaKnown RBP20.32■□□□□ 0.84
RTN1-202ENST00000342503 NMBRP28336 390 aa20.32■□□□□ 0.84
RTN1-202ENST00000342503 MAXP61244 160 aa20.32■□□□□ 0.84
RTN1-202ENST00000342503 MPP3Q13368 585 aa20.32■□□□□ 0.84
RTN1-202ENST00000342503 PPIGQ13427 754 aaKnown RBP eCLIP20.32■□□□□ 0.84
RTN1-202ENST00000342503 ZKSCAN8Q15776 578 aaPredicted RBP20.32■□□□□ 0.84
RTN1-202ENST00000342503 PDK4Q16654 411 aa20.32■□□□□ 0.84
RTN1-202ENST00000342503 RABGAP1LQ5R372 815 aa20.32■□□□□ 0.84
RTN1-202ENST00000342503 KDELC1Q6UW63 502 aa20.32■□□□□ 0.84
RTN1-202ENST00000342503 BADQ92934 168 aa20.32■□□□□ 0.84
RTN1-202ENST00000342503 IMP4Q96G21 291 aaKnown RBP20.32■□□□□ 0.84
RTN1-202ENST00000342503 PRICKLE1Q96MT3 831 aaPredicted RBP20.32■□□□□ 0.84
RTN1-202ENST00000342503 KIFC1Q9BW19 673 aa20.32■□□□□ 0.84
RTN1-202ENST00000342503 ENTPD7Q9NQZ7 604 aa20.32■□□□□ 0.84
RTN1-202ENST00000342503 STK39Q9UEW8 545 aa20.32■□□□□ 0.84
RTN1-202ENST00000342503 AGO1Q9UL18 857 aaKnown RBP20.32■□□□□ 0.84
RTN1-202ENST00000342503 COPEO14579 308 aa20.31■□□□□ 0.84
RTN1-202ENST00000342503 ALADP13716 330 aa20.31■□□□□ 0.84
RTN1-202ENST00000342503 CDH4P55283 916 aa20.31■□□□□ 0.84
RTN1-202ENST00000342503 RPS24P62847 133 aaKnown RBP20.31■□□□□ 0.84
RTN1-202ENST00000342503 TNK2Q07912 1038 aa20.31■□□□□ 0.84
RTN1-202ENST00000342503 PCID2Q5JVF3 399 aa20.31■□□□□ 0.84
RTN1-202ENST00000342503 C6orf89Q6UWU4 347 aa20.31■□□□□ 0.84
RTN1-202ENST00000342503 TIFABQ6ZNK6 161 aa20.31■□□□□ 0.84
RTN1-202ENST00000342503 ITIH5Q86UX2 942 aa20.31■□□□□ 0.84
RTN1-202ENST00000342503 KLHL23Q8NBE8 558 aa20.31■□□□□ 0.84
RTN1-202ENST00000342503 CCDC197Q8NCU1 140 aa20.31■□□□□ 0.84
RTN1-202ENST00000342503 ZBED2Q9BTP6 218 aa20.31■□□□□ 0.84
RTN1-202ENST00000342503 FSD1LQ9BXM9 530 aa20.31■□□□□ 0.84
RTN1-202ENST00000342503 RETREG1Q9H6L5 497 aa20.31■□□□□ 0.84
RTN1-202ENST00000342503 PRDM4Q9UKN5 801 aa20.31■□□□□ 0.84
RTN1-202ENST00000342503 SSX2IPQ9Y2D8 614 aa20.31■□□□□ 0.84
RTN1-202ENST00000342503 H3BNC9 293 aa20.3■□□□□ 0.84
RTN1-202ENST00000342503 TGM5O43548 720 aa20.3■□□□□ 0.84
RTN1-202ENST00000342503 PRAMEF11O60813 436 aa20.3■□□□□ 0.84
RTN1-202ENST00000342503 MBL2P11226 248 aaPredicted RBP20.3■□□□□ 0.84
RTN1-202ENST00000342503 ETFBP38117 255 aa20.3■□□□□ 0.84
RTN1-202ENST00000342503 CD86P42081 329 aa20.3■□□□□ 0.84
RTN1-202ENST00000342503 NUMBP49757 651 aa20.3■□□□□ 0.84
RTN1-202ENST00000342503 SGSHP51688 502 aa20.3■□□□□ 0.84
RTN1-202ENST00000342503 WNT3AP56704 352 aa20.3■□□□□ 0.84
RTN1-202ENST00000342503 DSC2Q02487 901 aa20.3■□□□□ 0.84
RTN1-202ENST00000342503 LBRQ14739 615 aaKnown RBP20.3■□□□□ 0.84
RTN1-202ENST00000342503 PCSK7Q16549 785 aa20.3■□□□□ 0.84
RTN1-202ENST00000342503 RANBP10Q6VN20 620 aa20.3■□□□□ 0.84
RTN1-202ENST00000342503 RGS9BPQ6ZS82 235 aa20.3■□□□□ 0.84
RTN1-202ENST00000342503 KDELC2Q7Z4H8 507 aa20.3■□□□□ 0.84
RTN1-202ENST00000342503 PGBD5Q8N414 524 aa20.3■□□□□ 0.84
RTN1-202ENST00000342503 SPOCK2Q92563 424 aa20.3■□□□□ 0.84
RTN1-202ENST00000342503 CABS1Q96KC9 395 aa20.3■□□□□ 0.84
RTN1-202ENST00000342503 IL21Q9HBE4 155 aa20.3■□□□□ 0.84
RTN1-202ENST00000342503 TRPC7Q9HCX4 862 aa20.3■□□□□ 0.84
RTN1-202ENST00000342503 SMPD4Q9NXE4 827 aa20.3■□□□□ 0.84
RTN1-202ENST00000342503 CXXC1Q9P0U4 656 aaPredicted RBP20.3■□□□□ 0.84
RTN1-202ENST00000342503 DENND4CQ5VZ89 1909 aa20.3■□□□□ 0.84
RTN1-202ENST00000342503 A0A0D9SEW6 157 aa20.3■□□□□ 0.84
RTN1-202ENST00000342503 MMP2P08253 660 aa20.3■□□□□ 0.84
RTN1-202ENST00000342503 ETV4P43268 484 aa20.3■□□□□ 0.84
RTN1-202ENST00000342503 C1QTNF8P60827 252 aa20.3■□□□□ 0.84
RTN1-202ENST00000342503 GNA12Q03113 381 aa20.3■□□□□ 0.84
RTN1-202ENST00000342503 FPGSQ05932 587 aa20.3■□□□□ 0.84
RTN1-202ENST00000342503 POU6F1Q14863 301 aa20.3■□□□□ 0.84
RTN1-202ENST00000342503 PKN3Q6P5Z2 889 aa20.3■□□□□ 0.84
RTN1-202ENST00000342503 CDHR3Q6ZTQ4 885 aa20.3■□□□□ 0.84
RTN1-202ENST00000342503 CCDC117Q8IWD4 279 aaPredicted RBP20.3■□□□□ 0.84
RTN1-202ENST00000342503 OR52K2Q8NGK3 314 aa20.3■□□□□ 0.84
RTN1-202ENST00000342503 LRRC8CQ8TDW0 803 aa20.3■□□□□ 0.84
RTN1-202ENST00000342503 ZNF778Q96MU6 729 aa20.3■□□□□ 0.84
RTN1-202ENST00000342503 FAM111AQ96PZ2 611 aa20.3■□□□□ 0.84
RTN1-202ENST00000342503 SRPK1Q96SB4 655 aaKnown RBP20.3■□□□□ 0.84
RTN1-202ENST00000342503 CYP2S1Q96SQ9 504 aa20.3■□□□□ 0.84
RTN1-202ENST00000342503 CPNE1Q99829 537 aa20.3■□□□□ 0.84
RTN1-202ENST00000342503 MAGEH1Q9H213 219 aa20.3■□□□□ 0.84
RTN1-202ENST00000342503 ATXN3LQ9H3M9 355 aa20.3■□□□□ 0.84
RTN1-202ENST00000342503 PDFQ9HBH1 243 aa20.3■□□□□ 0.84
RTN1-202ENST00000342503 C20orf96Q9NUD7 363 aaPredicted RBP20.3■□□□□ 0.84
RTN1-202ENST00000342503 PCMTD2Q9NV79 361 aa20.3■□□□□ 0.84
RTN1-202ENST00000342503 MKS1Q9NXB0 559 aa20.3■□□□□ 0.84
RTN1-202ENST00000342503 INSL6Q9Y581 213 aa20.3■□□□□ 0.84
RTN1-202ENST00000342503 TTC24A2A3L6 582 aaPredicted RBP20.29■□□□□ 0.84
RTN1-202ENST00000342503 CCDC78A2IDD5 438 aa20.29■□□□□ 0.84
RTN1-202ENST00000342503 WDR91A4D1P6 747 aa20.29■□□□□ 0.84
RTN1-202ENST00000342503 TSPAN3O60637 253 aa20.29■□□□□ 0.84
RTN1-202ENST00000342503 CXCL14O95715 111 aa20.29■□□□□ 0.84
RTN1-202ENST00000342503 GP5P40197 560 aa20.29■□□□□ 0.84
RTN1-202ENST00000342503 IFT88Q13099 833 aa20.29■□□□□ 0.84
RTN1-202ENST00000342503 DNAJC3Q13217 504 aa20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms