RNA–Protein interactions for RNA: ENST00000334414.10

PTPRB-202, Transcript of protein tyrosine phosphatase, receptor type B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPRB, Length 12,316 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRB-202ENST00000334414 KIF1AQ12756 1690 aa5.59□□□□□ -1.51
PTPRB-202ENST00000334414 DDX3XO00571 662 aaKnown RBP eCLIP5.59□□□□□ -1.52
PTPRB-202ENST00000334414 CAPN15O75808 1086 aa5.59□□□□□ -1.52
PTPRB-202ENST00000334414 ADRA2BP18089 450 aa5.59□□□□□ -1.52
PTPRB-202ENST00000334414 DRD4P21917 467 aa5.59□□□□□ -1.52
PTPRB-202ENST00000334414 DGKAP23743 735 aa5.59□□□□□ -1.52
PTPRB-202ENST00000334414 NAMPTP43490 491 aa5.59□□□□□ -1.52
PTPRB-202ENST00000334414 PCBP1Q15365 356 aaKnown RBP eCLIP5.59□□□□□ -1.52
PTPRB-202ENST00000334414 METTL21CQ5VZV1 264 aa5.59□□□□□ -1.52
PTPRB-202ENST00000334414 BAIAP2L2Q6UXY1 529 aa5.59□□□□□ -1.52
PTPRB-202ENST00000334414 SPATA19Q7Z5L4 167 aa5.59□□□□□ -1.52
PTPRB-202ENST00000334414 C11orf74Q86VG3 221 aa5.59□□□□□ -1.52
PTPRB-202ENST00000334414 SCN4BQ8IWT1 228 aa5.59□□□□□ -1.52
PTPRB-202ENST00000334414 CLYBLQ8N0X4 340 aa5.59□□□□□ -1.52
PTPRB-202ENST00000334414 GALNT6Q8NCL4 622 aa5.59□□□□□ -1.52
PTPRB-202ENST00000334414 PTCD2Q8WV60 388 aaKnown RBP5.59□□□□□ -1.52
PTPRB-202ENST00000334414 CRELD1Q96HD1 420 aa5.59□□□□□ -1.52
PTPRB-202ENST00000334414 ANKRD26Q9UPS8 1709 aa5.59□□□□□ -1.52
PTPRB-202ENST00000334414 FAM172BPA6NC97 362 aa5.59□□□□□ -1.52
PTPRB-202ENST00000334414 SASH3O75995 380 aa5.59□□□□□ -1.52
PTPRB-202ENST00000334414 RB1P06400 928 aa5.59□□□□□ -1.52
PTPRB-202ENST00000334414 VDRP11473 427 aa5.59□□□□□ -1.52
PTPRB-202ENST00000334414 AVPR1AP37288 418 aa5.59□□□□□ -1.52
PTPRB-202ENST00000334414 CDC16Q13042 620 aa5.59□□□□□ -1.52
PTPRB-202ENST00000334414 KCNA10Q16322 511 aa5.59□□□□□ -1.52
PTPRB-202ENST00000334414 NRF1Q16656 503 aa5.59□□□□□ -1.52
PTPRB-202ENST00000334414 ZNF181Q2M3W8 571 aa5.59□□□□□ -1.52
PTPRB-202ENST00000334414 PLEKHG6Q3KR16 790 aa5.59□□□□□ -1.52
PTPRB-202ENST00000334414 RBM48Q5RL73 367 aaKnown RBP5.59□□□□□ -1.52
PTPRB-202ENST00000334414 SULT1C3Q6IMI6 304 aa5.59□□□□□ -1.52
PTPRB-202ENST00000334414 HERC6Q8IVU3 1022 aa5.59□□□□□ -1.52
PTPRB-202ENST00000334414 SLC25A41Q8N5S1 370 aa5.59□□□□□ -1.52
PTPRB-202ENST00000334414 PHC3Q8NDX5 983 aa5.59□□□□□ -1.52
PTPRB-202ENST00000334414 ZNF548Q8NEK5 533 aaPredicted RBP5.59□□□□□ -1.52
PTPRB-202ENST00000334414 FBXO25Q8TCJ0 367 aa5.59□□□□□ -1.52
PTPRB-202ENST00000334414 CITED4Q96RK1 184 aa5.59□□□□□ -1.52
PTPRB-202ENST00000334414 TUBA1CQ9BQE3 449 aa5.59□□□□□ -1.52
PTPRB-202ENST00000334414 IRX2Q9BZI1 471 aaPredicted RBP5.59□□□□□ -1.52
PTPRB-202ENST00000334414 SLC28A1O00337 649 aa5.59□□□□□ -1.52
PTPRB-202ENST00000334414 CPB1P15086 417 aa5.59□□□□□ -1.52
PTPRB-202ENST00000334414 POU1F1P28069 291 aa5.59□□□□□ -1.52
PTPRB-202ENST00000334414 RHAGQ02094 409 aa5.59□□□□□ -1.52
PTPRB-202ENST00000334414 TRIM32Q13049 653 aa5.59□□□□□ -1.52
PTPRB-202ENST00000334414 NR6A1Q15406 480 aa5.59□□□□□ -1.52
PTPRB-202ENST00000334414 LIPMQ5VYY2 423 aa5.59□□□□□ -1.52
PTPRB-202ENST00000334414 QSOX2Q6ZRP7 698 aa5.59□□□□□ -1.52
PTPRB-202ENST00000334414 APOBEC3FQ8IUX4 373 aaKnown RBP5.59□□□□□ -1.52
PTPRB-202ENST00000334414 C10orf107Q8IVU9 208 aa5.59□□□□□ -1.52
PTPRB-202ENST00000334414 CAMKK1Q8N5S9 505 aa5.59□□□□□ -1.52
PTPRB-202ENST00000334414 INO80EQ8NBZ0 244 aaPredicted RBP5.59□□□□□ -1.52
PTPRB-202ENST00000334414 MAGEE2Q8TD90 523 aaPredicted RBP5.59□□□□□ -1.52
PTPRB-202ENST00000334414 TRPV5Q9NQA5 729 aa5.59□□□□□ -1.52
PTPRB-202ENST00000334414 GLS2Q9UI32 602 aa5.59□□□□□ -1.52
PTPRB-202ENST00000334414 CDH22Q9UJ99 828 aa5.59□□□□□ -1.52
PTPRB-202ENST00000334414 SNX6Q9UNH7 406 aa5.59□□□□□ -1.52
PTPRB-202ENST00000334414 ERBB3P21860 1342 aa5.58□□□□□ -1.52
PTPRB-202ENST00000334414 CNTNAP5Q8WYK1 1306 aa5.58□□□□□ -1.52
PTPRB-202ENST00000334414 ZNF806P0C7X5 589 aa5.58□□□□□ -1.52
PTPRB-202ENST00000334414 PSME3P61289 254 aa5.58□□□□□ -1.52
PTPRB-202ENST00000334414 OTUD3Q5T2D3 398 aaPredicted RBP5.58□□□□□ -1.52
PTPRB-202ENST00000334414 VWA5B1Q5TIE3 1220 aa5.58□□□□□ -1.52
PTPRB-202ENST00000334414 YME1L1Q96TA2 773 aa5.58□□□□□ -1.52
PTPRB-202ENST00000334414 MGME1Q9BQP7 344 aa5.58□□□□□ -1.52
PTPRB-202ENST00000334414 C14orf105Q9NVL8 296 aa5.58□□□□□ -1.52
PTPRB-202ENST00000334414 RAB23Q9ULC3 237 aa5.58□□□□□ -1.52
PTPRB-202ENST00000334414 ZNF7P17097 686 aaPredicted RBP5.58□□□□□ -1.52
PTPRB-202ENST00000334414 GPC1P35052 558 aa5.58□□□□□ -1.52
PTPRB-202ENST00000334414 OMPP47874 163 aa5.58□□□□□ -1.52
PTPRB-202ENST00000334414 SRP54P61011 504 aaKnown RBP5.58□□□□□ -1.52
PTPRB-202ENST00000334414 MVKQ03426 396 aa5.58□□□□□ -1.52
PTPRB-202ENST00000334414 NOTUMQ6P988 496 aa5.58□□□□□ -1.52
PTPRB-202ENST00000334414 SPPL2AQ8TCT8 520 aa5.58□□□□□ -1.52
PTPRB-202ENST00000334414 USP7Q93009 1102 aa5.58□□□□□ -1.52
PTPRB-202ENST00000334414 FUCA2Q9BTY2 467 aa5.58□□□□□ -1.52
PTPRB-202ENST00000334414 ACSS3Q9H6R3 686 aa5.58□□□□□ -1.52
PTPRB-202ENST00000334414 NINJ2Q9NZG7 142 aa5.58□□□□□ -1.52
PTPRB-202ENST00000334414 AP4E1Q9UPM8 1137 aa5.58□□□□□ -1.52
PTPRB-202ENST00000334414 ADGRB2O60241 1585 aa5.58□□□□□ -1.52
PTPRB-202ENST00000334414 TSPAN4O14817 238 aa5.58□□□□□ -1.52
PTPRB-202ENST00000334414 ASMTLO95671 621 aa5.58□□□□□ -1.52
PTPRB-202ENST00000334414 CST1P01037 141 aa5.58□□□□□ -1.52
PTPRB-202ENST00000334414 HLA-DRAP01903 254 aa5.58□□□□□ -1.52
PTPRB-202ENST00000334414 CBX5P45973 191 aa5.58□□□□□ -1.52
PTPRB-202ENST00000334414 ZDHHC20Q5W0Z9 365 aa5.58□□□□□ -1.52
PTPRB-202ENST00000334414 SMYD1Q8NB12 490 aa5.58□□□□□ -1.52
PTPRB-202ENST00000334414 KLF6Q99612 283 aaPredicted RBP5.58□□□□□ -1.52
PTPRB-202ENST00000334414 ROGDIQ9GZN7 287 aa5.58□□□□□ -1.52
PTPRB-202ENST00000334414 MAN1C1Q9NR34 630 aa5.58□□□□□ -1.52
PTPRB-202ENST00000334414 FAM170AA1A519 330 aa5.58□□□□□ -1.52
PTPRB-202ENST00000334414 ATP6V1G1O75348 118 aa5.58□□□□□ -1.52
PTPRB-202ENST00000334414 LYNP07948 512 aa5.58□□□□□ -1.52
PTPRB-202ENST00000334414 MZF1P28698 734 aaPredicted RBP5.58□□□□□ -1.52
PTPRB-202ENST00000334414 RPL9P32969 192 aaKnown RBP5.58□□□□□ -1.52
PTPRB-202ENST00000334414 GPD2P43304 727 aa5.58□□□□□ -1.52
PTPRB-202ENST00000334414 SLC11A2P49281 568 aa5.58□□□□□ -1.52
PTPRB-202ENST00000334414 GSCP56915 257 aaPredicted RBP5.58□□□□□ -1.52
PTPRB-202ENST00000334414 HYIQ5T013 277 aa5.58□□□□□ -1.52
PTPRB-202ENST00000334414 CHST15Q7LFX5 561 aaPredicted RBP5.58□□□□□ -1.52
PTPRB-202ENST00000334414 TTC7BQ86TV6 843 aa5.58□□□□□ -1.52
PTPRB-202ENST00000334414 OR8H1Q8NGG4 311 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms