RNA–Protein interactions for RNA: ENST00000332772.4

SIMC1-201, Transcript of SUMO interacting motifs containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SIMC1, Length 1,891 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1-201ENST00000332772 PPHLN1Q8NEY8 458 aaKnown RBP9.19□□□□□ -0.94
SIMC1-201ENST00000332772 BCL7CQ8WUZ0 217 aaPredicted RBP9.19□□□□□ -0.94
SIMC1-201ENST00000332772 FCRL3Q96P31 734 aaPredicted RBP9.19□□□□□ -0.94
SIMC1-201ENST00000332772 DDX50Q9BQ39 737 aaKnown RBP9.19□□□□□ -0.94
SIMC1-201ENST00000332772 TUBB6Q9BUF5 446 aa9.19□□□□□ -0.94
SIMC1-201ENST00000332772 TSSK1BQ9BXA7 367 aa9.19□□□□□ -0.94
SIMC1-201ENST00000332772 TRIM55Q9BYV6 548 aa9.19□□□□□ -0.94
SIMC1-201ENST00000332772 RC3H2Q9HBD1 1191 aaKnown RBP9.19□□□□□ -0.94
SIMC1-201ENST00000332772 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.19□□□□□ -0.94
SIMC1-201ENST00000332772 MPP6Q9NZW5 540 aa9.19□□□□□ -0.94
SIMC1-201ENST00000332772 NUDT5Q9UKK9 219 aa9.19□□□□□ -0.94
SIMC1-201ENST00000332772 SSX2IPQ9Y2D8 614 aa9.19□□□□□ -0.94
SIMC1-201ENST00000332772 ZNF840PA6NDX5 716 aa9.18□□□□□ -0.94
SIMC1-201ENST00000332772 NT5C1B-RDH14C9J2C7 533 aa9.18□□□□□ -0.94
SIMC1-201ENST00000332772 F5H5T6 163 aa9.18□□□□□ -0.94
SIMC1-201ENST00000332772 ACSL4O60488 711 aa9.18□□□□□ -0.94
SIMC1-201ENST00000332772 UGT1A9O60656 530 aa9.18□□□□□ -0.94
SIMC1-201ENST00000332772 HNRNPCL1O60812 293 aaKnown RBP9.18□□□□□ -0.94
SIMC1-201ENST00000332772 RAMP2O60895 175 aa9.18□□□□□ -0.94
SIMC1-201ENST00000332772 PIAS1O75925 651 aa9.18□□□□□ -0.94
SIMC1-201ENST00000332772 BAIAP3O94812 1187 aa9.18□□□□□ -0.94
SIMC1-201ENST00000332772 ALDOAP04075 364 aaKnown RBP9.18□□□□□ -0.94
SIMC1-201ENST00000332772 HLA-DQB2P05538 268 aa9.18□□□□□ -0.94
SIMC1-201ENST00000332772 BPGMP07738 259 aa9.18□□□□□ -0.94
SIMC1-201ENST00000332772 CLTBP09497 229 aa9.18□□□□□ -0.94
SIMC1-201ENST00000332772 COL6A2P12110 1019 aa9.18□□□□□ -0.94
SIMC1-201ENST00000332772 TACR2P21452 398 aa9.18□□□□□ -0.94
SIMC1-201ENST00000332772 OR1D2P34982 312 aa9.18□□□□□ -0.94
SIMC1-201ENST00000332772 PPM1AP35813 382 aa9.18□□□□□ -0.94
SIMC1-201ENST00000332772 SCTRP47872 440 aa9.18□□□□□ -0.94
SIMC1-201ENST00000332772 HARS2P49590 506 aaKnown RBP9.18□□□□□ -0.94
SIMC1-201ENST00000332772 CDH4P55283 916 aa9.18□□□□□ -0.94
SIMC1-201ENST00000332772 CRADDP78560 199 aa9.18□□□□□ -0.94
SIMC1-201ENST00000332772 PDE1BQ01064 536 aa9.18□□□□□ -0.94
SIMC1-201ENST00000332772 BNIP1Q12981 228 aa9.18□□□□□ -0.94
SIMC1-201ENST00000332772 RFTN1Q14699 578 aaPredicted RBP9.18□□□□□ -0.94
SIMC1-201ENST00000332772 POLD3Q15054 466 aaPredicted RBP9.18□□□□□ -0.94
SIMC1-201ENST00000332772 ZKSCAN8Q15776 578 aaPredicted RBP9.18□□□□□ -0.94
SIMC1-201ENST00000332772 RABGAP1LQ5R372 815 aa9.18□□□□□ -0.94
SIMC1-201ENST00000332772 KIAA0930Q6ICG6 404 aaPredicted RBP9.18□□□□□ -0.94
SIMC1-201ENST00000332772 KDELC1Q6UW63 502 aa9.18□□□□□ -0.94
SIMC1-201ENST00000332772 PRSS55Q6UWB4 352 aaPredicted RBP9.18□□□□□ -0.94
SIMC1-201ENST00000332772 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.18□□□□□ -0.94
SIMC1-201ENST00000332772 ARHGAP36Q6ZRI8 547 aa9.18□□□□□ -0.94
SIMC1-201ENST00000332772 KIAA0408Q6ZU52 694 aa9.18□□□□□ -0.94
SIMC1-201ENST00000332772 CHST9Q7L1S5 443 aa9.18□□□□□ -0.94
SIMC1-201ENST00000332772 OTOP3Q7RTS5 596 aa9.18□□□□□ -0.94
SIMC1-201ENST00000332772 KCNMB4Q86W47 210 aa9.18□□□□□ -0.94
SIMC1-201ENST00000332772 BBS5Q8N3I7 341 aa9.18□□□□□ -0.94
SIMC1-201ENST00000332772 ZNF784Q8NCA9 323 aaPredicted RBP9.18□□□□□ -0.94
SIMC1-201ENST00000332772 C10orf82Q8WW14 230 aa9.18□□□□□ -0.94
SIMC1-201ENST00000332772 SPOCK2Q92563 424 aa9.18□□□□□ -0.94
SIMC1-201ENST00000332772 TMEM169Q96HH4 297 aa9.18□□□□□ -0.94
SIMC1-201ENST00000332772 B3GALT6Q96L58 329 aa9.18□□□□□ -0.94
SIMC1-201ENST00000332772 MRGPRX2Q96LB1 330 aa9.18□□□□□ -0.94
SIMC1-201ENST00000332772 RPRD1AQ96P16 312 aaPredicted RBP9.18□□□□□ -0.94
SIMC1-201ENST00000332772 KLF6Q99612 283 aaPredicted RBP9.18□□□□□ -0.94
SIMC1-201ENST00000332772 CLSTN3Q9BQT9 956 aa9.18□□□□□ -0.94
SIMC1-201ENST00000332772 FAM96AQ9H5X1 160 aa9.18□□□□□ -0.94
SIMC1-201ENST00000332772 UGT1A7Q9HAW7 530 aa9.18□□□□□ -0.94
SIMC1-201ENST00000332772 UGT1A10Q9HAW8 530 aa9.18□□□□□ -0.94
SIMC1-201ENST00000332772 UGT1A8Q9HAW9 530 aa9.18□□□□□ -0.94
SIMC1-201ENST00000332772 SP110Q9HB58 689 aa9.18□□□□□ -0.94
SIMC1-201ENST00000332772 TMEM39AQ9NV64 488 aa9.18□□□□□ -0.94
SIMC1-201ENST00000332772 NDFIP2Q9NV92 336 aa9.18□□□□□ -0.94
SIMC1-201ENST00000332772 TRPM5Q9NZQ8 1165 aa9.18□□□□□ -0.94
SIMC1-201ENST00000332772 MID2Q9UJV3 735 aa9.18□□□□□ -0.94
SIMC1-201ENST00000332772 RIMKLBQ9ULI2 386 aa9.18□□□□□ -0.94
SIMC1-201ENST00000332772 ANKRD6Q9Y2G4 727 aa9.18□□□□□ -0.94
SIMC1-201ENST00000332772 MTO1Q9Y2Z2 717 aaKnown RBP9.18□□□□□ -0.94
SIMC1-201ENST00000332772 TCAF1Q9Y4C2 921 aa9.18□□□□□ -0.94
SIMC1-201ENST00000332772 MIA3Q5JRA6 1907 aa9.18□□□□□ -0.94
SIMC1-201ENST00000332772 HEATR9A2RTY3 570 aa9.17□□□□□ -0.94
SIMC1-201ENST00000332772 PRAMEF11O60813 436 aa9.17□□□□□ -0.94
SIMC1-201ENST00000332772 CLDN11O75508 207 aa9.17□□□□□ -0.94
SIMC1-201ENST00000332772 APOA4P06727 396 aa9.17□□□□□ -0.94
SIMC1-201ENST00000332772 ERVK-10P10266 1014 aa9.17□□□□□ -0.94
SIMC1-201ENST00000332772 HMGA1P17096 107 aaKnown RBP9.17□□□□□ -0.94
SIMC1-201ENST00000332772 GRK2P25098 689 aa9.17□□□□□ -0.94
SIMC1-201ENST00000332772 ETFBP38117 255 aa9.17□□□□□ -0.94
SIMC1-201ENST00000332772 ALDH1A3P47895 512 aa9.17□□□□□ -0.94
SIMC1-201ENST00000332772 CSRP3P50461 194 aa9.17□□□□□ -0.94
SIMC1-201ENST00000332772 PRKAA2P54646 552 aa9.17□□□□□ -0.94
SIMC1-201ENST00000332772 PLD1Q13393 1074 aa9.17□□□□□ -0.94
SIMC1-201ENST00000332772 VEPH1Q14D04 833 aa9.17□□□□□ -0.94
SIMC1-201ENST00000332772 CERCAMQ5T4B2 595 aa9.17□□□□□ -0.94
SIMC1-201ENST00000332772 RAP1GAP2Q684P5 730 aa9.17□□□□□ -0.94
SIMC1-201ENST00000332772 ZNF783Q6ZMS7 281 aa9.17□□□□□ -0.94
SIMC1-201ENST00000332772 CDHR3Q6ZTQ4 885 aa9.17□□□□□ -0.94
SIMC1-201ENST00000332772 FAM47EQ6ZV65 393 aa9.17□□□□□ -0.94
SIMC1-201ENST00000332772 CCDC91Q7Z6B0 441 aa9.17□□□□□ -0.94
SIMC1-201ENST00000332772 DEFB128Q7Z7B8 93 aa9.17□□□□□ -0.94
SIMC1-201ENST00000332772 MIB1Q86YT6 1006 aa9.17□□□□□ -0.94
SIMC1-201ENST00000332772 NUDCD3Q8IVD9 361 aa9.17□□□□□ -0.94
SIMC1-201ENST00000332772 TCEAL8Q8IYN2 117 aa9.17□□□□□ -0.94
SIMC1-201ENST00000332772 CALML6Q8TD86 181 aa9.17□□□□□ -0.94
SIMC1-201ENST00000332772 SCG3Q8WXD2 468 aaKnown RBP9.17□□□□□ -0.94
SIMC1-201ENST00000332772 IGSF8Q969P0 613 aa9.17□□□□□ -0.94
SIMC1-201ENST00000332772 E2F7Q96AV8 911 aa9.17□□□□□ -0.94
SIMC1-201ENST00000332772 HMCESQ96FZ2 354 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms