RNA–Protein interactions for RNA: ENST00000330295.9

CTHRC1-201, Transcript of collagen triple helix repeat containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTHRC1, Length 1,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-201ENST00000330295 SPASTQ9UBP0 616 aa15.18■□□□□ 0.02
CTHRC1-201ENST00000330295 SFMBT1Q9UHJ3 866 aa15.18■□□□□ 0.02
CTHRC1-201ENST00000330295 PPM1HQ9ULR3 514 aa15.18■□□□□ 0.02
CTHRC1-201ENST00000330295 MED13LQ71F56 2210 aa15.18■□□□□ 0.02
CTHRC1-201ENST00000330295 APCP25054 2843 aa15.18■□□□□ 0.02
CTHRC1-201ENST00000330295 TRPM6Q9BX84 2022 aa15.17■□□□□ 0.02
CTHRC1-201ENST00000330295 A0A1B0GVL5 298 aa15.17■□□□□ 0.02
CTHRC1-201ENST00000330295 POM121BA6NF01 834 aa15.17■□□□□ 0.02
CTHRC1-201ENST00000330295 EFCAB7A8K855 629 aa15.17■□□□□ 0.02
CTHRC1-201ENST00000330295 C1QTNF3-AMACRE9PGA6 284 aa15.17■□□□□ 0.02
CTHRC1-201ENST00000330295 LMO7DNF2Z398 122 aa15.17■□□□□ 0.02
CTHRC1-201ENST00000330295 P4HA1P13674 534 aa15.17■□□□□ 0.02
CTHRC1-201ENST00000330295 PFKFB1P16118 471 aa15.17■□□□□ 0.02
CTHRC1-201ENST00000330295 NR1D1P20393 614 aa15.17■□□□□ 0.02
CTHRC1-201ENST00000330295 NNMTP40261 264 aa15.17■□□□□ 0.02
CTHRC1-201ENST00000330295 ADKP55263 362 aaKnown RBP15.17■□□□□ 0.02
CTHRC1-201ENST00000330295 ZFP36L1Q07352 338 aaKnown RBP15.17■□□□□ 0.02
CTHRC1-201ENST00000330295 BIRC3Q13489 604 aa15.17■□□□□ 0.02
CTHRC1-201ENST00000330295 FAM26FQ5R3K3 315 aa15.17■□□□□ 0.02
CTHRC1-201ENST00000330295 TMPRSS9Q7Z410 1059 aa15.17■□□□□ 0.02
CTHRC1-201ENST00000330295 FRS2Q8WU20 508 aa15.17■□□□□ 0.02
CTHRC1-201ENST00000330295 BTN2A2Q8WVV5 523 aa15.17■□□□□ 0.02
CTHRC1-201ENST00000330295 PRICKLE1Q96MT3 831 aaPredicted RBP15.17■□□□□ 0.02
CTHRC1-201ENST00000330295 TWNKQ96RR1 684 aa15.17■□□□□ 0.02
CTHRC1-201ENST00000330295 SERTAD1Q9UHV2 236 aa15.17■□□□□ 0.02
CTHRC1-201ENST00000330295 IPO11Q9UI26 975 aaKnown RBP15.17■□□□□ 0.02
CTHRC1-201ENST00000330295 ZFR2Q9UPR6 939 aaKnown RBP15.17■□□□□ 0.02
CTHRC1-201ENST00000330295 SHANK1Q9Y566 2161 aa15.17■□□□□ 0.02
CTHRC1-201ENST00000330295 TYW5A2RUC4 315 aaKnown RBP15.16■□□□□ 0.02
CTHRC1-201ENST00000330295 EIF3DO15371 548 aaKnown RBP eCLIP15.16■□□□□ 0.02
CTHRC1-201ENST00000330295 NKX2-8O15522 239 aa15.16■□□□□ 0.02
CTHRC1-201ENST00000330295 MSI1O43347 362 aaKnown RBP15.16■□□□□ 0.02
CTHRC1-201ENST00000330295 ANXA6P08133 673 aa15.16■□□□□ 0.02
CTHRC1-201ENST00000330295 RABIFP47224 123 aa15.16■□□□□ 0.02
CTHRC1-201ENST00000330295 RPS24P62847 133 aaKnown RBP15.16■□□□□ 0.02
CTHRC1-201ENST00000330295 C1orf61Q13536 156 aa15.16■□□□□ 0.02
CTHRC1-201ENST00000330295 NCOA4Q13772 614 aa15.16■□□□□ 0.02
CTHRC1-201ENST00000330295 SEPT6Q14141 434 aa15.16■□□□□ 0.02
CTHRC1-201ENST00000330295 PRRT3Q5FWE3 981 aa15.16■□□□□ 0.02
CTHRC1-201ENST00000330295 CCDC117Q8IWD4 279 aaPredicted RBP15.16■□□□□ 0.02
CTHRC1-201ENST00000330295 APCDD1Q8J025 514 aa15.16■□□□□ 0.02
CTHRC1-201ENST00000330295 RBFAQ8N0V3 343 aa15.16■□□□□ 0.02
CTHRC1-201ENST00000330295 CPT1CQ8TCG5 803 aa15.16■□□□□ 0.02
CTHRC1-201ENST00000330295 CDH19Q9H159 772 aa15.16■□□□□ 0.02
CTHRC1-201ENST00000330295 LRRN3Q9H3W5 708 aa15.16■□□□□ 0.02
CTHRC1-201ENST00000330295 TTLL8A6PVC2 850 aa15.15■□□□□ 0.02
CTHRC1-201ENST00000330295 CAPN5O15484 640 aaPredicted RBP15.15■□□□□ 0.02
CTHRC1-201ENST00000330295 SPINT1O43278 529 aa15.15■□□□□ 0.02
CTHRC1-201ENST00000330295 PRKAR1AP10644 381 aa15.15■□□□□ 0.02
CTHRC1-201ENST00000330295 SLC11A2P49281 568 aa15.15■□□□□ 0.02
CTHRC1-201ENST00000330295 EIF2B5Q13144 721 aaKnown RBP15.15■□□□□ 0.02
CTHRC1-201ENST00000330295 PDE1CQ14123 709 aaPredicted RBP15.15■□□□□ 0.02
CTHRC1-201ENST00000330295 TPRG1LQ5T0D9 272 aa15.15■□□□□ 0.02
CTHRC1-201ENST00000330295 SEL1L3Q68CR1 1132 aa15.15■□□□□ 0.02
CTHRC1-201ENST00000330295 SLC34A3Q8N130 599 aa15.15■□□□□ 0.02
CTHRC1-201ENST00000330295 ARL10Q8N8L6 244 aa15.15■□□□□ 0.02
CTHRC1-201ENST00000330295 RNF139Q8WU17 664 aa15.15■□□□□ 0.02
CTHRC1-201ENST00000330295 PAGE5Q96GU1 130 aa15.15■□□□□ 0.02
CTHRC1-201ENST00000330295 SLC45A3Q96JT2 553 aa15.15■□□□□ 0.02
CTHRC1-201ENST00000330295 LRRC61Q9BV99 259 aa15.15■□□□□ 0.02
CTHRC1-201ENST00000330295 TCEAL2Q9H3H9 227 aaPredicted RBP15.15■□□□□ 0.02
CTHRC1-201ENST00000330295 EXOC1Q9NV70 894 aa15.15■□□□□ 0.02
CTHRC1-201ENST00000330295 GULP1Q9UBP9 304 aa15.15■□□□□ 0.02
CTHRC1-201ENST00000330295 APOBEC3BQ9UH17 382 aaKnown RBP15.15■□□□□ 0.02
CTHRC1-201ENST00000330295 K7EM74 188 aa15.14■□□□□ 0.01
CTHRC1-201ENST00000330295 ALOX15BO15296 676 aa15.14■□□□□ 0.01
CTHRC1-201ENST00000330295 YY2O15391 372 aa15.14■□□□□ 0.01
CTHRC1-201ENST00000330295 DUX1O43812 170 aa15.14■□□□□ 0.01
CTHRC1-201ENST00000330295 ACSL4O60488 711 aa15.14■□□□□ 0.01
CTHRC1-201ENST00000330295 PCDH8O95206 1070 aa15.14■□□□□ 0.01
CTHRC1-201ENST00000330295 PRF1P14222 555 aa15.14■□□□□ 0.01
CTHRC1-201ENST00000330295 ZNF18P17022 549 aa15.14■□□□□ 0.01
CTHRC1-201ENST00000330295 SNRPFP62306 86 aaKnown RBP15.14■□□□□ 0.01
CTHRC1-201ENST00000330295 CDC20Q12834 499 aa15.14■□□□□ 0.01
CTHRC1-201ENST00000330295 NAA30Q147X3 362 aaPredicted RBP15.14■□□□□ 0.01
CTHRC1-201ENST00000330295 TMEM259Q4ZIN3 620 aa15.14■□□□□ 0.01
CTHRC1-201ENST00000330295 RAB41Q5JT25 222 aa15.14■□□□□ 0.01
CTHRC1-201ENST00000330295 KYQ8NBH2 561 aa15.14■□□□□ 0.01
CTHRC1-201ENST00000330295 MYEOVQ96EZ4 313 aa15.14■□□□□ 0.01
CTHRC1-201ENST00000330295 NT5C1AQ9BXI3 368 aa15.14■□□□□ 0.01
CTHRC1-201ENST00000330295 BLZF1Q9H2G9 400 aa15.14■□□□□ 0.01
CTHRC1-201ENST00000330295 CGNQ9P2M7 1197 aaKnown RBP15.14■□□□□ 0.01
CTHRC1-201ENST00000330295 HPSEQ9Y251 543 aa15.14■□□□□ 0.01
CTHRC1-201ENST00000330295 ABCA2Q9BZC7 2435 aa15.14■□□□□ 0.01
CTHRC1-201ENST00000330295 FAM237AA0A1B0GTK4 181 aa15.13■□□□□ 0.01
CTHRC1-201ENST00000330295 A0A1B0GTL3 188 aa15.13■□□□□ 0.01
CTHRC1-201ENST00000330295 MCF2LO15068 1137 aa15.13■□□□□ 0.01
CTHRC1-201ENST00000330295 ACTN4O43707 911 aaKnown RBP15.13■□□□□ 0.01
CTHRC1-201ENST00000330295 LUC7L3O95232 432 aaKnown RBP15.13■□□□□ 0.01
CTHRC1-201ENST00000330295 VNN1O95497 513 aa15.13■□□□□ 0.01
CTHRC1-201ENST00000330295 ZBED1O96006 694 aa15.13■□□□□ 0.01
CTHRC1-201ENST00000330295 LDLRP01130 860 aa15.13■□□□□ 0.01
CTHRC1-201ENST00000330295 UGT1A3P35503 534 aa15.13■□□□□ 0.01
CTHRC1-201ENST00000330295 ASPAP45381 313 aa15.13■□□□□ 0.01
CTHRC1-201ENST00000330295 RECQLP46063 649 aaPredicted RBP15.13■□□□□ 0.01
CTHRC1-201ENST00000330295 ARSDP51689 593 aa15.13■□□□□ 0.01
CTHRC1-201ENST00000330295 NDUFA8P51970 172 aa15.13■□□□□ 0.01
CTHRC1-201ENST00000330295 INCA1Q0VD86 236 aa15.13■□□□□ 0.01
CTHRC1-201ENST00000330295 CUL4BQ13620 913 aa15.13■□□□□ 0.01
CTHRC1-201ENST00000330295 DEFB109BQ30KR1 87 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms