RNA–Protein interactions for RNA: ENST00000320755.11

COL9A1-201, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-201ENST00000320755 ARHGAP26Q9UNA1 814 aa17.7■□□□□ 0.42
COL9A1-201ENST00000320755 HHLA1C9JL84 531 aa17.69■□□□□ 0.42
COL9A1-201ENST00000320755 MAGEA12P43365 314 aa17.69■□□□□ 0.42
COL9A1-201ENST00000320755 PCSK7Q16549 785 aa17.69■□□□□ 0.42
COL9A1-201ENST00000320755 ANO4Q32M45 955 aa17.69■□□□□ 0.42
COL9A1-201ENST00000320755 ZNF280DQ6N043 979 aa17.69■□□□□ 0.42
COL9A1-201ENST00000320755 CLEC14AQ86T13 490 aa17.69■□□□□ 0.42
COL9A1-201ENST00000320755 SNX32Q86XE0 403 aa17.69■□□□□ 0.42
COL9A1-201ENST00000320755 NDFIP2Q9NV92 336 aa17.69■□□□□ 0.42
COL9A1-201ENST00000320755 ADAMTS6Q9UKP5 1117 aa17.69■□□□□ 0.42
COL9A1-201ENST00000320755 MAGEB16A2A368 324 aa17.69■□□□□ 0.42
COL9A1-201ENST00000320755 ERI2A8K979 691 aaKnown RBP17.69■□□□□ 0.42
COL9A1-201ENST00000320755 HAS3O00219 553 aa17.69■□□□□ 0.42
COL9A1-201ENST00000320755 HCAR3P49019 387 aa17.69■□□□□ 0.42
COL9A1-201ENST00000320755 PGFP49763 221 aa17.69■□□□□ 0.42
COL9A1-201ENST00000320755 CNGA3Q16281 694 aa17.69■□□□□ 0.42
COL9A1-201ENST00000320755 TMCO4Q5TGY1 634 aa17.69■□□□□ 0.42
COL9A1-201ENST00000320755 CXCL17Q6UXB2 119 aa17.69■□□□□ 0.42
COL9A1-201ENST00000320755 BHLHA9Q7RTU4 235 aa17.69■□□□□ 0.42
COL9A1-201ENST00000320755 ATPAF2Q8N5M1 289 aa17.69■□□□□ 0.42
COL9A1-201ENST00000320755 ZNF419Q96HQ0 510 aaPredicted RBP17.69■□□□□ 0.42
COL9A1-201ENST00000320755 CATSPER2Q96P56 530 aa17.69■□□□□ 0.42
COL9A1-201ENST00000320755 SYT17Q9BSW7 474 aa17.69■□□□□ 0.42
COL9A1-201ENST00000320755 EBF3Q9H4W6 596 aa17.69■□□□□ 0.42
COL9A1-201ENST00000320755 ZDHHC2Q9UIJ5 367 aa17.69■□□□□ 0.42
COL9A1-201ENST00000320755 FKBP6O75344 327 aa17.68■□□□□ 0.42
COL9A1-201ENST00000320755 JUNP05412 331 aaKnown RBP17.68■□□□□ 0.42
COL9A1-201ENST00000320755 TFEBP19484 476 aa17.68■□□□□ 0.42
COL9A1-201ENST00000320755 LSM12Q3MHD2 195 aaKnown RBP17.68■□□□□ 0.42
COL9A1-201ENST00000320755 NOMO2Q5JPE7 1267 aa17.68■□□□□ 0.42
COL9A1-201ENST00000320755 RAB41Q5JT25 222 aa17.68■□□□□ 0.42
COL9A1-201ENST00000320755 TMC7Q7Z402 723 aa17.68■□□□□ 0.42
COL9A1-201ENST00000320755 DHDDSQ86SQ9 333 aa17.68■□□□□ 0.42
COL9A1-201ENST00000320755 FSTL5Q8N475 847 aaPredicted RBP17.68■□□□□ 0.42
COL9A1-201ENST00000320755 OR6Y1Q8NGX8 325 aa17.68■□□□□ 0.42
COL9A1-201ENST00000320755 ACTRT2Q8TDY3 377 aa17.68■□□□□ 0.42
COL9A1-201ENST00000320755 MPP6Q9NZW5 540 aa17.68■□□□□ 0.42
COL9A1-201ENST00000320755 CDH9Q9ULB4 789 aa17.68■□□□□ 0.42
COL9A1-201ENST00000320755 TMEM233B4DJY2 109 aa17.68■□□□□ 0.42
COL9A1-201ENST00000320755 F8W810 466 aa17.68■□□□□ 0.42
COL9A1-201ENST00000320755 MYL4P12829 197 aa17.68■□□□□ 0.42
COL9A1-201ENST00000320755 RAG1P15918 1043 aa17.68■□□□□ 0.42
COL9A1-201ENST00000320755 ALOX15P16050 662 aaPredicted RBP17.68■□□□□ 0.42
COL9A1-201ENST00000320755 CHRNA4P43681 627 aa17.68■□□□□ 0.42
COL9A1-201ENST00000320755 AIF1P55008 147 aa17.68■□□□□ 0.42
COL9A1-201ENST00000320755 CACNB2Q08289 660 aaPredicted RBP17.68■□□□□ 0.42
COL9A1-201ENST00000320755 TRIP10Q15642 601 aa17.68■□□□□ 0.42
COL9A1-201ENST00000320755 GNASQ5JWF2 1037 aa17.68■□□□□ 0.42
COL9A1-201ENST00000320755 ZSCAN18Q8TBC5 510 aaPredicted RBP17.68■□□□□ 0.42
COL9A1-201ENST00000320755 NXNL1Q96CM4 212 aa17.68■□□□□ 0.42
COL9A1-201ENST00000320755 GPAMQ9HCL2 828 aa17.68■□□□□ 0.42
COL9A1-201ENST00000320755 SLC45A1Q9Y2W3 748 aa17.68■□□□□ 0.42
COL9A1-201ENST00000320755 MAGEA13PA6NCF6 341 aa17.68■□□□□ 0.42
COL9A1-201ENST00000320755 C9IYK1 514 aa17.68■□□□□ 0.42
COL9A1-201ENST00000320755 TXNDC9O14530 226 aa17.68■□□□□ 0.42
COL9A1-201ENST00000320755 GNAT1P11488 350 aa17.68■□□□□ 0.42
COL9A1-201ENST00000320755 PEX2P28328 305 aa17.68■□□□□ 0.42
COL9A1-201ENST00000320755 PCSK1P29120 753 aa17.68■□□□□ 0.42
COL9A1-201ENST00000320755 RPL14P50914 215 aaKnown RBP17.68■□□□□ 0.42
COL9A1-201ENST00000320755 CSE1LP55060 971 aaKnown RBP17.68■□□□□ 0.42
COL9A1-201ENST00000320755 GJA9P57773 515 aa17.68■□□□□ 0.42
COL9A1-201ENST00000320755 THEMIS2Q5TEJ8 643 aa17.68■□□□□ 0.42
COL9A1-201ENST00000320755 SEL1L3Q68CR1 1132 aa17.68■□□□□ 0.42
COL9A1-201ENST00000320755 ISLR2Q6UXK2 745 aa17.68■□□□□ 0.42
COL9A1-201ENST00000320755 AGMOQ6ZNB7 445 aa17.68■□□□□ 0.42
COL9A1-201ENST00000320755 SDCCAG8Q86SQ7 713 aaPredicted RBP17.68■□□□□ 0.42
COL9A1-201ENST00000320755 CEP97Q8IW35 865 aa17.68■□□□□ 0.42
COL9A1-201ENST00000320755 TMEM86AQ8N2M4 240 aa17.68■□□□□ 0.42
COL9A1-201ENST00000320755 TBL1YQ9BQ87 522 aa17.68■□□□□ 0.42
COL9A1-201ENST00000320755 XPR1Q9UBH6 696 aa17.68■□□□□ 0.42
COL9A1-201ENST00000320755 CCNT2O60583 730 aaKnown RBP17.67■□□□□ 0.42
COL9A1-201ENST00000320755 SLC35E2BP0CK96 405 aa17.67■□□□□ 0.42
COL9A1-201ENST00000320755 PKNOX1P55347 436 aa17.67■□□□□ 0.42
COL9A1-201ENST00000320755 MRPS6P82932 125 aaKnown RBP17.67■□□□□ 0.42
COL9A1-201ENST00000320755 LBRQ14739 615 aaKnown RBP17.67■□□□□ 0.42
COL9A1-201ENST00000320755 SPRYD7Q5W111 196 aa17.67■□□□□ 0.42
COL9A1-201ENST00000320755 OR52E8Q6IFG1 317 aa17.67■□□□□ 0.42
COL9A1-201ENST00000320755 DCLRE1AQ6PJP8 1040 aa17.67■□□□□ 0.42
COL9A1-201ENST00000320755 LRRTM3Q86VH5 581 aa17.67■□□□□ 0.42
COL9A1-201ENST00000320755 FBXW8Q8N3Y1 598 aa17.67■□□□□ 0.42
COL9A1-201ENST00000320755 GATA6Q92908 595 aa17.67■□□□□ 0.42
COL9A1-201ENST00000320755 USP13Q92995 863 aaPredicted RBP17.67■□□□□ 0.42
COL9A1-201ENST00000320755 ISL2Q96A47 359 aa17.67■□□□□ 0.42
COL9A1-201ENST00000320755 RTP3Q9BQQ7 232 aa17.67■□□□□ 0.42
COL9A1-201ENST00000320755 RHOJQ9H4E5 214 aa17.67■□□□□ 0.42
COL9A1-201ENST00000320755 SBK3P0C264 359 aa17.67■□□□□ 0.42
COL9A1-201ENST00000320755 PIK3R1P27986 724 aa17.67■□□□□ 0.42
COL9A1-201ENST00000320755 SFT2D3Q587I9 215 aa17.67■□□□□ 0.42
COL9A1-201ENST00000320755 PGM2L1Q6PCE3 622 aa17.67■□□□□ 0.42
COL9A1-201ENST00000320755 GDPD5Q8WTR4 605 aa17.67■□□□□ 0.42
COL9A1-201ENST00000320755 ELMO2Q96JJ3 720 aa17.67■□□□□ 0.42
COL9A1-201ENST00000320755 TUBGCP5Q96RT8 1024 aa17.67■□□□□ 0.42
COL9A1-201ENST00000320755 VAT1Q99536 393 aa17.67■□□□□ 0.42
COL9A1-201ENST00000320755 TSC22D3Q99576 134 aa17.67■□□□□ 0.42
COL9A1-201ENST00000320755 GPR22Q99680 433 aa17.67■□□□□ 0.42
COL9A1-201ENST00000320755 FSD1LQ9BXM9 530 aa17.67■□□□□ 0.42
COL9A1-201ENST00000320755 CHST12Q9NRB3 414 aa17.67■□□□□ 0.42
COL9A1-201ENST00000320755 RBM22Q9NW64 420 aaKnown RBP eCLIP17.67■□□□□ 0.42
COL9A1-201ENST00000320755 ACOT9Q9Y305 439 aa17.67■□□□□ 0.42
COL9A1-201ENST00000320755 PDCD11Q14690 1871 aaKnown RBP17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms