RNA–Protein interactions for RNA: ENST00000315544.6

CNOT4-201, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 3,783 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-201ENST00000315544 TMLHEQ9NVH6 421 aa7.98□□□□□ -1.13
CNOT4-201ENST00000315544 SAMD15Q9P1V8 674 aa7.98□□□□□ -1.13
CNOT4-201ENST00000315544 ASIC3Q9UHC3 531 aa7.98□□□□□ -1.13
CNOT4-201ENST00000315544 ZDHHC2Q9UIJ5 367 aa7.98□□□□□ -1.13
CNOT4-201ENST00000315544 PCDHA9Q9Y5H5 950 aa7.98□□□□□ -1.13
CNOT4-201ENST00000315544 SOX1O00570 391 aaPredicted RBP7.97□□□□□ -1.13
CNOT4-201ENST00000315544 INSRRP14616 1297 aa7.97□□□□□ -1.13
CNOT4-201ENST00000315544 STX2P32856 288 aa7.97□□□□□ -1.13
CNOT4-201ENST00000315544 LAMC2Q13753 1193 aa7.97□□□□□ -1.13
CNOT4-201ENST00000315544 UPP1Q16831 310 aa7.97□□□□□ -1.13
CNOT4-201ENST00000315544 ZNF699Q32M78 642 aa7.97□□□□□ -1.13
CNOT4-201ENST00000315544 TECRLQ5HYJ1 363 aa7.97□□□□□ -1.13
CNOT4-201ENST00000315544 RETREG3Q86VR2 466 aa7.97□□□□□ -1.13
CNOT4-201ENST00000315544 HACE1Q8IYU2 909 aa7.97□□□□□ -1.13
CNOT4-201ENST00000315544 FBXW8Q8N3Y1 598 aa7.97□□□□□ -1.13
CNOT4-201ENST00000315544 SCLT1Q96NL6 688 aa7.97□□□□□ -1.13
CNOT4-201ENST00000315544 SELENOSQ9BQE4 189 aa7.97□□□□□ -1.13
CNOT4-201ENST00000315544 PNPOQ9NVS9 261 aa7.97□□□□□ -1.13
CNOT4-201ENST00000315544 ARMC1Q9NVT9 282 aa7.97□□□□□ -1.13
CNOT4-201ENST00000315544 PCDH10Q9P2E7 1040 aa7.97□□□□□ -1.13
CNOT4-201ENST00000315544 A0A087WZ62 844 aa7.97□□□□□ -1.13
CNOT4-201ENST00000315544 SMIM35A0A1B0GVV1 85 aa7.97□□□□□ -1.13
CNOT4-201ENST00000315544 PLOD2O00469 737 aa7.97□□□□□ -1.13
CNOT4-201ENST00000315544 PGAM1P18669 254 aa7.97□□□□□ -1.13
CNOT4-201ENST00000315544 AXLP30530 894 aa7.97□□□□□ -1.13
CNOT4-201ENST00000315544 CLCN3P51790 818 aa7.97□□□□□ -1.13
CNOT4-201ENST00000315544 AQP4P55087 323 aa7.97□□□□□ -1.13
CNOT4-201ENST00000315544 CETN1Q12798 172 aa7.97□□□□□ -1.13
CNOT4-201ENST00000315544 KCNA10Q16322 511 aa7.97□□□□□ -1.13
CNOT4-201ENST00000315544 TRMT5Q32P41 509 aaKnown RBP7.97□□□□□ -1.13
CNOT4-201ENST00000315544 KCNT2Q6UVM3 1135 aa7.97□□□□□ -1.13
CNOT4-201ENST00000315544 SCD5Q86SK9 330 aa7.97□□□□□ -1.13
CNOT4-201ENST00000315544 SCUBE3Q8IX30 993 aa7.97□□□□□ -1.13
CNOT4-201ENST00000315544 TOP6BLQ8N6T0 577 aa7.97□□□□□ -1.13
CNOT4-201ENST00000315544 MFSD2AQ8NA29 543 aa7.97□□□□□ -1.13
CNOT4-201ENST00000315544 RNF149Q8NC42 400 aa7.97□□□□□ -1.13
CNOT4-201ENST00000315544 ARRDC2Q8TBH0 407 aa7.97□□□□□ -1.13
CNOT4-201ENST00000315544 SPPL2BQ8TCT7 592 aa7.97□□□□□ -1.13
CNOT4-201ENST00000315544 FCRL1Q96LA6 429 aa7.97□□□□□ -1.13
CNOT4-201ENST00000315544 MRGPRX2Q96LB1 330 aa7.97□□□□□ -1.13
CNOT4-201ENST00000315544 LGMNQ99538 433 aa7.97□□□□□ -1.13
CNOT4-201ENST00000315544 FDXACB1Q9BRP7 624 aaPredicted RBP7.97□□□□□ -1.13
CNOT4-201ENST00000315544 DUSP16Q9BY84 665 aa7.97□□□□□ -1.13
CNOT4-201ENST00000315544 SP110Q9HB58 689 aa7.97□□□□□ -1.13
CNOT4-201ENST00000315544 LMCD1Q9NZU5 365 aa7.97□□□□□ -1.13
CNOT4-201ENST00000315544 ERVK-11Q9UQG0 969 aa7.97□□□□□ -1.13
CNOT4-201ENST00000315544 EML5Q05BV3 1969 aa7.97□□□□□ -1.13
CNOT4-201ENST00000315544 SMIM28A0A1B0GU29 152 aa7.97□□□□□ -1.13
CNOT4-201ENST00000315544 GNAT1P11488 350 aa7.97□□□□□ -1.13
CNOT4-201ENST00000315544 CA5AP35218 305 aa7.97□□□□□ -1.13
CNOT4-201ENST00000315544 POLD2P49005 469 aa7.97□□□□□ -1.13
CNOT4-201ENST00000315544 VWA5B1Q5TIE3 1220 aa7.97□□□□□ -1.13
CNOT4-201ENST00000315544 EFCAB12Q6NXP0 572 aa7.97□□□□□ -1.13
CNOT4-201ENST00000315544 TLK2Q86UE8 772 aa7.97□□□□□ -1.13
CNOT4-201ENST00000315544 FBXO16Q8IX29 292 aaPredicted RBP7.97□□□□□ -1.13
CNOT4-201ENST00000315544 PCSK9Q8NBP7 692 aaKnown RBP7.97□□□□□ -1.13
CNOT4-201ENST00000315544 TOP1MTQ969P6 601 aa7.97□□□□□ -1.13
CNOT4-201ENST00000315544 ACAP3Q96P50 834 aa7.97□□□□□ -1.13
CNOT4-201ENST00000315544 HOMER2Q9NSB8 354 aa7.97□□□□□ -1.13
CNOT4-201ENST00000315544 STK39Q9UEW8 545 aa7.97□□□□□ -1.13
CNOT4-201ENST00000315544 ZFP69BQ9UJL9 534 aa7.97□□□□□ -1.13
CNOT4-201ENST00000315544 TRIM49D1C9J1S8 452 aa7.96□□□□□ -1.13
CNOT4-201ENST00000315544 AURKAO14965 403 aa7.96□□□□□ -1.13
CNOT4-201ENST00000315544 FGF4P08620 206 aa7.96□□□□□ -1.13
CNOT4-201ENST00000315544 SNRPAP09012 282 aaKnown RBP7.96□□□□□ -1.13
CNOT4-201ENST00000315544 DARSP14868 501 aaKnown RBP7.96□□□□□ -1.13
CNOT4-201ENST00000315544 NDUFV1P49821 464 aa7.96□□□□□ -1.13
CNOT4-201ENST00000315544 CPT1AP50416 773 aa7.96□□□□□ -1.13
CNOT4-201ENST00000315544 ATP4BP51164 291 aa7.96□□□□□ -1.13
CNOT4-201ENST00000315544 PGGT1BP53609 377 aa7.96□□□□□ -1.13
CNOT4-201ENST00000315544 CRYBA2P53672 197 aa7.96□□□□□ -1.13
CNOT4-201ENST00000315544 LILRA4P59901 499 aa7.96□□□□□ -1.13
CNOT4-201ENST00000315544 MRPS35P82673 323 aaKnown RBP7.96□□□□□ -1.13
CNOT4-201ENST00000315544 SULT2A1Q06520 285 aa7.96□□□□□ -1.13
CNOT4-201ENST00000315544 GBX1Q14549 363 aa7.96□□□□□ -1.13
CNOT4-201ENST00000315544 TMEM240Q5SV17 173 aa7.96□□□□□ -1.13
CNOT4-201ENST00000315544 XAF1Q6GPH4 301 aa7.96□□□□□ -1.13
CNOT4-201ENST00000315544 OR52E4Q8NGH9 312 aa7.96□□□□□ -1.13
CNOT4-201ENST00000315544 HPDLQ96IR7 371 aa7.96□□□□□ -1.13
CNOT4-201ENST00000315544 FAM192AQ9GZU8 254 aa7.96□□□□□ -1.13
CNOT4-201ENST00000315544 DPP3Q9NY33 737 aa7.96□□□□□ -1.13
CNOT4-201ENST00000315544 ADAMTS20P59510 1910 aa7.96□□□□□ -1.13
CNOT4-201ENST00000315544 CPNE6O95741 557 aa7.96□□□□□ -1.14
CNOT4-201ENST00000315544 AHSGP02765 367 aa7.96□□□□□ -1.14
CNOT4-201ENST00000315544 MYCLP12524 364 aaPredicted RBP7.96□□□□□ -1.14
CNOT4-201ENST00000315544 CR2P20023 1033 aa7.96□□□□□ -1.14
CNOT4-201ENST00000315544 PSMA2P25787 234 aa7.96□□□□□ -1.14
CNOT4-201ENST00000315544 POLR2BP30876 1174 aaKnown RBP7.96□□□□□ -1.14
CNOT4-201ENST00000315544 GJC1P36383 396 aa7.96□□□□□ -1.14
CNOT4-201ENST00000315544 LEPRP48357 1165 aaKnown RBP7.96□□□□□ -1.14
CNOT4-201ENST00000315544 DAOAP59103 153 aa7.96□□□□□ -1.14
CNOT4-201ENST00000315544 PSMC1P62191 440 aaKnown RBP7.96□□□□□ -1.14
CNOT4-201ENST00000315544 SATB1Q01826 763 aa7.96□□□□□ -1.14
CNOT4-201ENST00000315544 ROR1Q01973 937 aa7.96□□□□□ -1.14
CNOT4-201ENST00000315544 SEMA3AQ14563 771 aa7.96□□□□□ -1.14
CNOT4-201ENST00000315544 KYAT1Q16773 422 aa7.96□□□□□ -1.14
CNOT4-201ENST00000315544 TYSND1Q2T9J0 566 aa7.96□□□□□ -1.14
CNOT4-201ENST00000315544 ZNF789Q5FWF6 425 aa7.96□□□□□ -1.14
CNOT4-201ENST00000315544 GJC2Q5T442 439 aaPredicted RBP7.96□□□□□ -1.14
CNOT4-201ENST00000315544 ARHGAP36Q6ZRI8 547 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms