RNA–Protein interactions for RNA: ENST00000312481.11

COL6A5-202, Transcript of collagen type VI alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL6A5, Length 9,226 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-202ENST00000312481 FAUP35544 74 aaKnown RBP8.94□□□□□ -0.98
COL6A5-202ENST00000312481 ST8SIA6P61647 398 aa8.94□□□□□ -0.98
COL6A5-202ENST00000312481 SREBF2Q12772 1141 aa8.94□□□□□ -0.98
COL6A5-202ENST00000312481 SLC47A2Q86VL8 602 aa8.94□□□□□ -0.98
COL6A5-202ENST00000312481 PM20D2Q8IYS1 436 aa8.94□□□□□ -0.98
COL6A5-202ENST00000312481 FBXO39Q8N4B4 442 aa8.94□□□□□ -0.98
COL6A5-202ENST00000312481 CSGALNACT1Q8TDX6 532 aa8.94□□□□□ -0.98
COL6A5-202ENST00000312481 FTHL17Q9BXU8 183 aa8.94□□□□□ -0.98
COL6A5-202ENST00000312481 BLOC1S4Q9NUP1 217 aa8.94□□□□□ -0.98
COL6A5-202ENST00000312481 TMEM161AQ9NX61 479 aa8.94□□□□□ -0.98
COL6A5-202ENST00000312481 GGA3Q9NZ52 723 aa8.94□□□□□ -0.98
COL6A5-202ENST00000312481 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.94□□□□□ -0.98
COL6A5-202ENST00000312481 WWOXQ9NZC7 414 aa8.94□□□□□ -0.98
COL6A5-202ENST00000312481 CNTNAP2Q9UHC6 1331 aa8.94□□□□□ -0.98
COL6A5-202ENST00000312481 CAPZA1P52907 286 aa8.94□□□□□ -0.98
COL6A5-202ENST00000312481 TCEA2Q15560 299 aa8.94□□□□□ -0.98
COL6A5-202ENST00000312481 TTMPQ5BVD1 217 aa8.94□□□□□ -0.98
COL6A5-202ENST00000312481 SAE1Q9UBE0 346 aaPredicted RBP8.94□□□□□ -0.98
COL6A5-202ENST00000312481 PSME2Q9UL46 239 aa8.94□□□□□ -0.98
COL6A5-202ENST00000312481 MCM3APO60318 1980 aa8.94□□□□□ -0.98
COL6A5-202ENST00000312481 GRXCR2A6NFK2 248 aa8.94□□□□□ -0.98
COL6A5-202ENST00000312481 NCAM1P13591 858 aa8.94□□□□□ -0.98
COL6A5-202ENST00000312481 ACLYP53396 1101 aa8.94□□□□□ -0.98
COL6A5-202ENST00000312481 IL2P60568 153 aa8.94□□□□□ -0.98
COL6A5-202ENST00000312481 NFIXQ14938 502 aa8.94□□□□□ -0.98
COL6A5-202ENST00000312481 TMEM132BQ14DG7 1078 aa8.94□□□□□ -0.98
COL6A5-202ENST00000312481 FSCN1Q16658 493 aaKnown RBP8.94□□□□□ -0.98
COL6A5-202ENST00000312481 ANXA8L1Q5VT79 327 aa8.94□□□□□ -0.98
COL6A5-202ENST00000312481 RETSATQ6NUM9 610 aa8.94□□□□□ -0.98
COL6A5-202ENST00000312481 METTL2BQ6P1Q9 378 aaKnown RBP8.94□□□□□ -0.98
COL6A5-202ENST00000312481 PRELID2Q8N945 189 aa8.94□□□□□ -0.98
COL6A5-202ENST00000312481 TDRD1Q9BXT4 1180 aaKnown RBP8.94□□□□□ -0.98
COL6A5-202ENST00000312481 MRM3Q9HC36 420 aaKnown RBP8.94□□□□□ -0.98
COL6A5-202ENST00000312481 TAS2R1Q9NYW7 299 aa8.94□□□□□ -0.98
COL6A5-202ENST00000312481 USP20Q9Y2K6 914 aa8.94□□□□□ -0.98
COL6A5-202ENST00000312481 ABCA3Q99758 1704 aa8.93□□□□□ -0.98
COL6A5-202ENST00000312481 ARID1BQ8NFD5 2236 aaPredicted RBP8.93□□□□□ -0.98
COL6A5-202ENST00000312481 OTCP00480 354 aa8.93□□□□□ -0.98
COL6A5-202ENST00000312481 ERP29P30040 261 aaKnown RBP8.93□□□□□ -0.98
COL6A5-202ENST00000312481 ELK3P41970 407 aa8.93□□□□□ -0.98
COL6A5-202ENST00000312481 TGFB2P61812 414 aa8.93□□□□□ -0.98
COL6A5-202ENST00000312481 TBCELQ5QJ74 424 aa8.93□□□□□ -0.98
COL6A5-202ENST00000312481 MARC1Q5VT66 337 aa8.93□□□□□ -0.98
COL6A5-202ENST00000312481 ZC3H3Q8IXZ2 948 aaKnown RBP8.93□□□□□ -0.98
COL6A5-202ENST00000312481 DPP10Q8N608 796 aa8.93□□□□□ -0.98
COL6A5-202ENST00000312481 HIPK4Q8NE63 616 aa8.93□□□□□ -0.98
COL6A5-202ENST00000312481 FLCNQ8NFG4 579 aa8.93□□□□□ -0.98
COL6A5-202ENST00000312481 ELOVL6Q9H5J4 265 aa8.93□□□□□ -0.98
COL6A5-202ENST00000312481 TRIM39Q9HCM9 518 aa8.93□□□□□ -0.98
COL6A5-202ENST00000312481 ABCC13Q9NSE7 274 aa8.93□□□□□ -0.98
COL6A5-202ENST00000312481 TRIM10Q9UDY6 481 aa8.93□□□□□ -0.98
COL6A5-202ENST00000312481 PCDHB1Q9Y5F3 818 aa8.93□□□□□ -0.98
COL6A5-202ENST00000312481 A0A087WWV3 80 aa8.93□□□□□ -0.98
COL6A5-202ENST00000312481 FAM237BA0A1B0GVD1 139 aa8.93□□□□□ -0.98
COL6A5-202ENST00000312481 MSCO60682 206 aa8.93□□□□□ -0.98
COL6A5-202ENST00000312481 LTA4HP09960 611 aaKnown RBP8.93□□□□□ -0.98
COL6A5-202ENST00000312481 GTF2A2P52657 109 aa8.93□□□□□ -0.98
COL6A5-202ENST00000312481 PKNOX1P55347 436 aa8.93□□□□□ -0.98
COL6A5-202ENST00000312481 DOK7Q18PE1 504 aa8.93□□□□□ -0.98
COL6A5-202ENST00000312481 ARHGAP15Q53QZ3 475 aa8.93□□□□□ -0.98
COL6A5-202ENST00000312481 SLC27A1Q6PCB7 646 aa8.93□□□□□ -0.98
COL6A5-202ENST00000312481 CASP12Q6UXS9 341 aa8.93□□□□□ -0.98
COL6A5-202ENST00000312481 RYBPQ8N488 228 aaPredicted RBP8.93□□□□□ -0.98
COL6A5-202ENST00000312481 MCOLN3Q8TDD5 553 aa8.93□□□□□ -0.98
COL6A5-202ENST00000312481 FAR1Q8WVX9 515 aa8.93□□□□□ -0.98
COL6A5-202ENST00000312481 SLITRK2Q9H156 845 aa8.93□□□□□ -0.98
COL6A5-202ENST00000312481 RPRD1BQ9NQG5 326 aaKnown RBP8.93□□□□□ -0.98
COL6A5-202ENST00000312481 PHIPQ8WWQ0 1821 aa8.93□□□□□ -0.98
COL6A5-202ENST00000312481 EFCAB10A6NFE3 127 aa8.93□□□□□ -0.98
COL6A5-202ENST00000312481 AQP12BA6NM10 295 aa8.93□□□□□ -0.98
COL6A5-202ENST00000312481 ZBBXA8MT70 800 aa8.93□□□□□ -0.98
COL6A5-202ENST00000312481 SLC9A3R1O14745 358 aaPredicted RBP8.93□□□□□ -0.98
COL6A5-202ENST00000312481 ADAMDEC1O15204 470 aa8.93□□□□□ -0.98
COL6A5-202ENST00000312481 RARAP10276 462 aa8.93□□□□□ -0.98
COL6A5-202ENST00000312481 C2CD6Q53TS8 623 aa8.93□□□□□ -0.98
COL6A5-202ENST00000312481 COQ5Q5HYK3 327 aa8.93□□□□□ -0.98
COL6A5-202ENST00000312481 TRIM40Q6P9F5 258 aa8.93□□□□□ -0.98
COL6A5-202ENST00000312481 AQP12AQ8IXF9 295 aa8.93□□□□□ -0.98
COL6A5-202ENST00000312481 WDR36Q8NI36 951 aaKnown RBP8.93□□□□□ -0.98
COL6A5-202ENST00000312481 USP33Q8TEY7 942 aa8.93□□□□□ -0.98
COL6A5-202ENST00000312481 GLMNQ92990 594 aa8.93□□□□□ -0.98
COL6A5-202ENST00000312481 NUDT12Q9BQG2 462 aa8.93□□□□□ -0.98
COL6A5-202ENST00000312481 GPR63Q9BZJ6 419 aa8.93□□□□□ -0.98
COL6A5-202ENST00000312481 SLC24A3Q9HC58 644 aa8.93□□□□□ -0.98
COL6A5-202ENST00000312481 SUCOQ9UBS9 1254 aaKnown RBP8.93□□□□□ -0.98
COL6A5-202ENST00000312481 DNAJC16Q9Y2G8 782 aa8.93□□□□□ -0.98
COL6A5-202ENST00000312481 EPHB2P29323 1055 aa8.93□□□□□ -0.98
COL6A5-202ENST00000312481 IL1RL1Q01638 556 aa8.93□□□□□ -0.98
COL6A5-202ENST00000312481 N4BP2L1Q5TBK1 243 aaPredicted RBP8.93□□□□□ -0.98
COL6A5-202ENST00000312481 CDH24Q86UP0 819 aa8.93□□□□□ -0.98
COL6A5-202ENST00000312481 ANKMY2Q8IV38 441 aa8.93□□□□□ -0.98
COL6A5-202ENST00000312481 KLF6Q99612 283 aaPredicted RBP8.93□□□□□ -0.98
COL6A5-202ENST00000312481 NDFIP2Q9NV92 336 aa8.93□□□□□ -0.98
COL6A5-202ENST00000312481 A0A096LPK6 155 aa8.93□□□□□ -0.98
COL6A5-202ENST00000312481 DHRS12A0PJE2 317 aa8.93□□□□□ -0.98
COL6A5-202ENST00000312481 CASP1P29466 404 aa8.93□□□□□ -0.98
COL6A5-202ENST00000312481 LRPAP1P30533 357 aa8.93□□□□□ -0.98
COL6A5-202ENST00000312481 FKBP1BP68106 108 aa8.93□□□□□ -0.98
COL6A5-202ENST00000312481 NAA30Q147X3 362 aaPredicted RBP8.93□□□□□ -0.98
COL6A5-202ENST00000312481 CDK20Q8IZL9 346 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms