RNA–Protein interactions for RNA: ENST00000298281.8

PCF11-201, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCF11, Length 7,677 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-201ENST00000298281 FNDC5Q8NAU1 212 aa12.21□□□□□ -0.45
PCF11-201ENST00000298281 CPT1CQ8TCG5 803 aa12.21□□□□□ -0.45
PCF11-201ENST00000298281 TAAR1Q96RJ0 339 aa12.21□□□□□ -0.45
PCF11-201ENST00000298281 NOS1APO75052 506 aaPredicted RBP12.21□□□□□ -0.46
PCF11-201ENST00000298281 PROSCO94903 275 aa12.21□□□□□ -0.46
PCF11-201ENST00000298281 NQO1P15559 274 aaKnown RBP12.21□□□□□ -0.46
PCF11-201ENST00000298281 DNERQ8NFT8 737 aa12.21□□□□□ -0.46
PCF11-201ENST00000298281 SLC12A8A0AV02 714 aa12.21□□□□□ -0.46
PCF11-201ENST00000298281 UBDO15205 165 aa12.21□□□□□ -0.46
PCF11-201ENST00000298281 CBFA2T3O75081 653 aa12.21□□□□□ -0.46
PCF11-201ENST00000298281 PGK1P00558 417 aa12.21□□□□□ -0.46
PCF11-201ENST00000298281 POLR2EP19388 210 aaKnown RBP12.21□□□□□ -0.46
PCF11-201ENST00000298281 CYP4F2P78329 520 aa12.21□□□□□ -0.46
PCF11-201ENST00000298281 CYP4F3Q08477 520 aa12.21□□□□□ -0.46
PCF11-201ENST00000298281 OAFQ86UD1 273 aa12.21□□□□□ -0.46
PCF11-201ENST00000298281 PANX3Q96QZ0 392 aa12.21□□□□□ -0.46
PCF11-201ENST00000298281 ARHGAP9Q9BRR9 750 aa12.21□□□□□ -0.46
PCF11-201ENST00000298281 TMEM39BQ9GZU3 492 aa12.21□□□□□ -0.46
PCF11-201ENST00000298281 RIBC2Q9H4K1 309 aa12.21□□□□□ -0.46
PCF11-201ENST00000298281 TRIM66O15016 1216 aa12.21□□□□□ -0.46
PCF11-201ENST00000298281 TSPAN3O60637 253 aa12.21□□□□□ -0.46
PCF11-201ENST00000298281 ANXA6P08133 673 aa12.21□□□□□ -0.46
PCF11-201ENST00000298281 TYMPP19971 482 aa12.21□□□□□ -0.46
PCF11-201ENST00000298281 CDH17Q12864 832 aa12.21□□□□□ -0.46
PCF11-201ENST00000298281 DCTN2Q13561 401 aaKnown RBP12.21□□□□□ -0.46
PCF11-201ENST00000298281 FBXL19Q6PCT2 694 aa12.21□□□□□ -0.46
PCF11-201ENST00000298281 FSTL5Q8N475 847 aaPredicted RBP12.21□□□□□ -0.46
PCF11-201ENST00000298281 KYQ8NBH2 561 aa12.21□□□□□ -0.46
PCF11-201ENST00000298281 NUAK2Q9H093 628 aa12.21□□□□□ -0.46
PCF11-201ENST00000298281 GSAPA4D1B5 854 aa12.2□□□□□ -0.46
PCF11-201ENST00000298281 CCNA2P20248 432 aa12.2□□□□□ -0.46
PCF11-201ENST00000298281 CAP2P40123 477 aa12.2□□□□□ -0.46
PCF11-201ENST00000298281 CD151P48509 253 aa12.2□□□□□ -0.46
PCF11-201ENST00000298281 PTGES3Q15185 160 aaKnown RBP12.2□□□□□ -0.46
PCF11-201ENST00000298281 USF2Q15853 346 aaPredicted RBP12.2□□□□□ -0.46
PCF11-201ENST00000298281 FBXO47Q5MNV8 452 aa12.2□□□□□ -0.46
PCF11-201ENST00000298281 ZFP1Q6P2D0 407 aa12.2□□□□□ -0.46
PCF11-201ENST00000298281 ZNF613Q6PF04 617 aa12.2□□□□□ -0.46
PCF11-201ENST00000298281 ILDR2Q71H61 639 aa12.2□□□□□ -0.46
PCF11-201ENST00000298281 TDRD5Q8NAT2 981 aaKnown RBP12.2□□□□□ -0.46
PCF11-201ENST00000298281 OR10H5Q8NGA6 315 aa12.2□□□□□ -0.46
PCF11-201ENST00000298281 HIST1H2AAQ96QV6 131 aa12.2□□□□□ -0.46
PCF11-201ENST00000298281 PTGFRNQ9P2B2 879 aa12.2□□□□□ -0.46
PCF11-201ENST00000298281 LIMD1Q9UGP4 676 aa12.2□□□□□ -0.46
PCF11-201ENST00000298281 ANGPT4Q9Y264 503 aa12.2□□□□□ -0.46
PCF11-201ENST00000298281 ANKRD6Q9Y2G4 727 aa12.2□□□□□ -0.46
PCF11-201ENST00000298281 H3BNH8 94 aa12.2□□□□□ -0.46
PCF11-201ENST00000298281 SEMA3DO95025 777 aa12.2□□□□□ -0.46
PCF11-201ENST00000298281 GNRH1P01148 92 aa12.2□□□□□ -0.46
PCF11-201ENST00000298281 BMP7P18075 431 aa12.2□□□□□ -0.46
PCF11-201ENST00000298281 POLD2P49005 469 aa12.2□□□□□ -0.46
PCF11-201ENST00000298281 PPP1R15BQ5SWA1 713 aa12.2□□□□□ -0.46
PCF11-201ENST00000298281 GRTP1Q5TC63 336 aa12.2□□□□□ -0.46
PCF11-201ENST00000298281 RORBQ92753 470 aa12.2□□□□□ -0.46
PCF11-201ENST00000298281 NSMCE2Q96MF7 247 aa12.2□□□□□ -0.46
PCF11-201ENST00000298281 PAFAH2Q99487 392 aa12.2□□□□□ -0.46
PCF11-201ENST00000298281 CLPTM1O96005 669 aa12.2□□□□□ -0.46
PCF11-201ENST00000298281 SERPINA1P01009 418 aa12.2□□□□□ -0.46
PCF11-201ENST00000298281 JCHAINP01591 159 aa12.2□□□□□ -0.46
PCF11-201ENST00000298281 HSD17B2P37059 387 aa12.2□□□□□ -0.46
PCF11-201ENST00000298281 BACE1P56817 501 aa12.2□□□□□ -0.46
PCF11-201ENST00000298281 CORO7P57737 925 aa12.2□□□□□ -0.46
PCF11-201ENST00000298281 PTPN11Q06124 597 aaPredicted RBP12.2□□□□□ -0.46
PCF11-201ENST00000298281 PPIL2Q13356 520 aa12.2□□□□□ -0.46
PCF11-201ENST00000298281 EFR3AQ14156 821 aa12.2□□□□□ -0.46
PCF11-201ENST00000298281 RASA2Q15283 850 aa12.2□□□□□ -0.46
PCF11-201ENST00000298281 C11orf63Q6NUN7 778 aa12.2□□□□□ -0.46
PCF11-201ENST00000298281 PLEKHA1Q9HB21 404 aa12.2□□□□□ -0.46
PCF11-201ENST00000298281 ADPRHL2Q9NX46 363 aa12.2□□□□□ -0.46
PCF11-201ENST00000298281 TAS2R13Q9NYV9 303 aa12.2□□□□□ -0.46
PCF11-201ENST00000298281 CNTNAP4Q9C0A0 1308 aa12.2□□□□□ -0.46
PCF11-201ENST00000298281 FAM172BPA6NC97 362 aa12.2□□□□□ -0.46
PCF11-201ENST00000298281 KCNQ2O43526 872 aa12.2□□□□□ -0.46
PCF11-201ENST00000298281 GATBO75879 557 aaKnown RBP12.2□□□□□ -0.46
PCF11-201ENST00000298281 CYP1A1P04798 512 aaPredicted RBP12.2□□□□□ -0.46
PCF11-201ENST00000298281 RLN1P04808 185 aa12.2□□□□□ -0.46
PCF11-201ENST00000298281 FAM228BP0C875 321 aa12.2□□□□□ -0.46
PCF11-201ENST00000298281 NAB1Q13506 487 aa12.2□□□□□ -0.46
PCF11-201ENST00000298281 S100ZQ8WXG8 99 aa12.2□□□□□ -0.46
PCF11-201ENST00000298281 SEMA4DQ92854 862 aa12.2□□□□□ -0.46
PCF11-201ENST00000298281 RAD51AP1Q96B01 352 aa12.2□□□□□ -0.46
PCF11-201ENST00000298281 PHF21BQ96EK2 531 aa12.2□□□□□ -0.46
PCF11-201ENST00000298281 CBWD1Q9BRT8 395 aa12.2□□□□□ -0.46
PCF11-201ENST00000298281 UGT2B28Q9BY64 529 aa12.2□□□□□ -0.46
PCF11-201ENST00000298281 NMRAL1Q9HBL8 299 aa12.2□□□□□ -0.46
PCF11-201ENST00000298281 PNPLA8Q9NP80 782 aa12.2□□□□□ -0.46
PCF11-201ENST00000298281 UXTQ9UBK9 157 aaPredicted RBP12.2□□□□□ -0.46
PCF11-201ENST00000298281 MYH3P11055 1940 aa12.2□□□□□ -0.46
PCF11-201ENST00000298281 MSL3P1P0C860 447 aa12.2□□□□□ -0.46
PCF11-201ENST00000298281 NPTX2P47972 431 aa12.2□□□□□ -0.46
PCF11-201ENST00000298281 ACLYP53396 1101 aa12.2□□□□□ -0.46
PCF11-201ENST00000298281 NEDD8Q15843 81 aa12.2□□□□□ -0.46
PCF11-201ENST00000298281 PTAR1Q7Z6K3 402 aaPredicted RBP12.2□□□□□ -0.46
PCF11-201ENST00000298281 C4orf19Q8IY42 314 aa12.2□□□□□ -0.46
PCF11-201ENST00000298281 CXorf40BQ96DE9 158 aa12.2□□□□□ -0.46
PCF11-201ENST00000298281 INVSQ9Y283 1065 aa12.2□□□□□ -0.46
PCF11-201ENST00000298281 PCDHA11Q9Y5I1 949 aa12.2□□□□□ -0.46
PCF11-201ENST00000298281 LRRC7Q96NW7 1537 aa12.2□□□□□ -0.46
PCF11-201ENST00000298281 CCDC88CQ9P219 2028 aa12.2□□□□□ -0.46
PCF11-201ENST00000298281 VSTM5A8MXK1 200 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 115.3 ms