RNA–Protein interactions for RNA: ENST00000271850.11

TPM3-201, Transcript of tropomyosin 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TPM3, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-201ENST00000271850 SULT2A1Q06520 285 aa9.18□□□□□ -0.94
TPM3-201ENST00000271850 CETN1Q12798 172 aa9.18□□□□□ -0.94
TPM3-201ENST00000271850 NME3Q13232 169 aa9.18□□□□□ -0.94
TPM3-201ENST00000271850 RTP5Q14D33 572 aa9.18□□□□□ -0.94
TPM3-201ENST00000271850 ZNF284Q2VY69 593 aa9.18□□□□□ -0.94
TPM3-201ENST00000271850 C2CD6Q53TS8 623 aa9.18□□□□□ -0.94
TPM3-201ENST00000271850 TPRG1LQ5T0D9 272 aa9.18□□□□□ -0.94
TPM3-201ENST00000271850 TTC39BQ5VTQ0 682 aaPredicted RBP9.18□□□□□ -0.94
TPM3-201ENST00000271850 RNF219Q5W0B1 726 aaPredicted RBP9.18□□□□□ -0.94
TPM3-201ENST00000271850 SEL1L3Q68CR1 1132 aa9.18□□□□□ -0.94
TPM3-201ENST00000271850 LINGO4Q6UY18 593 aa9.18□□□□□ -0.94
TPM3-201ENST00000271850 GCNT7Q6ZNI0 430 aa9.18□□□□□ -0.94
TPM3-201ENST00000271850 SLC26A9Q7LBE3 791 aa9.18□□□□□ -0.94
TPM3-201ENST00000271850 SETXQ7Z333 2677 aaKnown RBP9.18□□□□□ -0.94
TPM3-201ENST00000271850 OR8D1Q8WZ84 308 aa9.18□□□□□ -0.94
TPM3-201ENST00000271850 NPY6RQ99463 290 aa9.18□□□□□ -0.94
TPM3-201ENST00000271850 MYOCQ99972 504 aa9.18□□□□□ -0.94
TPM3-201ENST00000271850 PRORYQ9H606 182 aa9.18□□□□□ -0.94
TPM3-201ENST00000271850 GPR27Q9NS67 375 aa9.18□□□□□ -0.94
TPM3-201ENST00000271850 APEX2Q9UBZ4 518 aa9.18□□□□□ -0.94
TPM3-201ENST00000271850 NEU3Q9UQ49 428 aa9.18□□□□□ -0.94
TPM3-201ENST00000271850 PCDHB1Q9Y5F3 818 aa9.18□□□□□ -0.94
TPM3-201ENST00000271850 WASF2Q9Y6W5 498 aa9.18□□□□□ -0.94
TPM3-201ENST00000271850 DOCK4Q8N1I0 1966 aa9.17□□□□□ -0.94
TPM3-201ENST00000271850 IGLV3-10A0A075B6K4 115 aa9.17□□□□□ -0.94
TPM3-201ENST00000271850 A0A1W2PNU3 283 aaPredicted RBP9.17□□□□□ -0.94
TPM3-201ENST00000271850 DRGXA6NNA5 263 aa9.17□□□□□ -0.94
TPM3-201ENST00000271850 E9PAM4 449 aa9.17□□□□□ -0.94
TPM3-201ENST00000271850 M0QYT0 321 aa9.17□□□□□ -0.94
TPM3-201ENST00000271850 ALOX15BO15296 676 aa9.17□□□□□ -0.94
TPM3-201ENST00000271850 RAD51BO15315 384 aa9.17□□□□□ -0.94
TPM3-201ENST00000271850 YKT6O15498 198 aa9.17□□□□□ -0.94
TPM3-201ENST00000271850 SPINT1O43278 529 aa9.17□□□□□ -0.94
TPM3-201ENST00000271850 SIGLEC6O43699 453 aa9.17□□□□□ -0.94
TPM3-201ENST00000271850 RNGTTO60942 597 aaKnown RBP9.17□□□□□ -0.94
TPM3-201ENST00000271850 ZMPSTE24O75844 475 aa9.17□□□□□ -0.94
TPM3-201ENST00000271850 JUPP14923 745 aa9.17□□□□□ -0.94
TPM3-201ENST00000271850 CKMT2P17540 419 aa9.17□□□□□ -0.94
TPM3-201ENST00000271850 DGKAP23743 735 aa9.17□□□□□ -0.94
TPM3-201ENST00000271850 ACP1P24666 158 aa9.17□□□□□ -0.94
TPM3-201ENST00000271850 CDH5P33151 784 aaPredicted RBP9.17□□□□□ -0.94
TPM3-201ENST00000271850 FLT3P36888 993 aa9.17□□□□□ -0.94
TPM3-201ENST00000271850 USP8P40818 1118 aa9.17□□□□□ -0.94
TPM3-201ENST00000271850 CXCR3P49682 368 aa9.17□□□□□ -0.94
TPM3-201ENST00000271850 CDH4P55283 916 aa9.17□□□□□ -0.94
TPM3-201ENST00000271850 CLDN2P57739 230 aa9.17□□□□□ -0.94
TPM3-201ENST00000271850 SLC6A3Q01959 620 aa9.17□□□□□ -0.94
TPM3-201ENST00000271850 KCNMA1Q12791 1236 aa9.17□□□□□ -0.94
TPM3-201ENST00000271850 INAVAQ3KP66 663 aa9.17□□□□□ -0.94
TPM3-201ENST00000271850 TMEM259Q4ZIN3 620 aa9.17□□□□□ -0.94
TPM3-201ENST00000271850 MIIPQ5JXC2 388 aa9.17□□□□□ -0.94
TPM3-201ENST00000271850 RABGAP1LQ5R372 815 aa9.17□□□□□ -0.94
TPM3-201ENST00000271850 OR6B2Q6IFH4 312 aa9.17□□□□□ -0.94
TPM3-201ENST00000271850 C11orf57Q6ZUT1 292 aaPredicted RBP9.17□□□□□ -0.94
TPM3-201ENST00000271850 ENOSF1Q7L5Y1 443 aa9.17□□□□□ -0.94
TPM3-201ENST00000271850 IQCHQ86VS3 1027 aa9.17□□□□□ -0.94
TPM3-201ENST00000271850 ERICH1Q86X53 443 aa9.17□□□□□ -0.94
TPM3-201ENST00000271850 DCBLD1Q8N8Z6 715 aa9.17□□□□□ -0.94
TPM3-201ENST00000271850 OR13H1Q8NG92 308 aa9.17□□□□□ -0.94
TPM3-201ENST00000271850 OR7D4Q8NG98 312 aa9.17□□□□□ -0.94
TPM3-201ENST00000271850 TBCBQ99426 244 aa9.17□□□□□ -0.94
TPM3-201ENST00000271850 TRIM62Q9BVG3 475 aa9.17□□□□□ -0.94
TPM3-201ENST00000271850 MAGEB5Q9BZ81 275 aa9.17□□□□□ -0.94
TPM3-201ENST00000271850 TKTL2Q9H0I9 626 aa9.17□□□□□ -0.94
TPM3-201ENST00000271850 KDM4CQ9H3R0 1056 aa9.17□□□□□ -0.94
TPM3-201ENST00000271850 MPP6Q9NZW5 540 aa9.17□□□□□ -0.94
TPM3-201ENST00000271850 RWDD2AQ9UIY3 292 aa9.17□□□□□ -0.94
TPM3-201ENST00000271850 VPS28Q9UK41 221 aa9.17□□□□□ -0.94
TPM3-201ENST00000271850 PNMA8BQ9ULN7 279 aaPredicted RBP9.17□□□□□ -0.94
TPM3-201ENST00000271850 DMTF1Q9Y222 760 aa9.17□□□□□ -0.94
TPM3-201ENST00000271850 TDRD6O60522 2096 aaKnown RBP9.16□□□□□ -0.94
TPM3-201ENST00000271850 CHD5Q8TDI0 1954 aa9.16□□□□□ -0.94
TPM3-201ENST00000271850 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.16□□□□□ -0.94
TPM3-201ENST00000271850 A0A1W2PQU0 124 aa9.16□□□□□ -0.94
TPM3-201ENST00000271850 GTPBP10A4D1E9 387 aaKnown RBP9.16□□□□□ -0.94
TPM3-201ENST00000271850 SLC31A1O15431 190 aa9.16□□□□□ -0.94
TPM3-201ENST00000271850 BNIP3LO60238 219 aa9.16□□□□□ -0.94
TPM3-201ENST00000271850 BRINP1O60477 761 aa9.16□□□□□ -0.94
TPM3-201ENST00000271850 CLDN11O75508 207 aa9.16□□□□□ -0.94
TPM3-201ENST00000271850 ZIC2O95409 532 aaPredicted RBP9.16□□□□□ -0.94
TPM3-201ENST00000271850 C1SP09871 688 aa9.16□□□□□ -0.94
TPM3-201ENST00000271850 THEGLP0DJG4 465 aa9.16□□□□□ -0.94
TPM3-201ENST00000271850 CHRNA3P32297 505 aa9.16□□□□□ -0.94
TPM3-201ENST00000271850 NOS2P35228 1153 aa9.16□□□□□ -0.94
TPM3-201ENST00000271850 ABCG1P45844 678 aa9.16□□□□□ -0.94
TPM3-201ENST00000271850 GABRB2P47870 512 aa9.16□□□□□ -0.94
TPM3-201ENST00000271850 GCGRP47871 477 aa9.16□□□□□ -0.94
TPM3-201ENST00000271850 ARRB1P49407 418 aaPredicted RBP9.16□□□□□ -0.94
TPM3-201ENST00000271850 NUCB2P80303 420 aa9.16□□□□□ -0.94
TPM3-201ENST00000271850 ARF5P84085 180 aa9.16□□□□□ -0.94
TPM3-201ENST00000271850 SEMG2Q02383 582 aa9.16□□□□□ -0.94
TPM3-201ENST00000271850 SFSWAPQ12872 951 aaKnown RBP9.16□□□□□ -0.94
TPM3-201ENST00000271850 ZNF177Q13360 481 aaPredicted RBP9.16□□□□□ -0.94
TPM3-201ENST00000271850 EXOC3L4Q17RC7 722 aa9.16□□□□□ -0.94
TPM3-201ENST00000271850 ACCSLQ4AC99 568 aa9.16□□□□□ -0.94
TPM3-201ENST00000271850 EFHC1Q5JVL4 640 aa9.16□□□□□ -0.94
TPM3-201ENST00000271850 CDCP2Q5VXM1 449 aa9.16□□□□□ -0.94
TPM3-201ENST00000271850 C22orf39Q6P5X5 142 aa9.16□□□□□ -0.94
TPM3-201ENST00000271850 DPY19L3Q6ZPD9 716 aa9.16□□□□□ -0.94
TPM3-201ENST00000271850 TFAP2DQ7Z6R9 452 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms