RNA–Protein interactions for RNA: ENST00000265044.6

SSR3-201, Transcript of signal sequence receptor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSR3, Length 3,716 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-201ENST00000265044 CERS2Q96G23 380 aa9.47□□□□□ -0.89
SSR3-201ENST00000265044 C11orf84Q9BUA3 381 aaPredicted RBP9.47□□□□□ -0.89
SSR3-201ENST00000265044 ARHGEF38Q9NXL2 777 aa9.47□□□□□ -0.89
SSR3-201ENST00000265044 IGSF9Q9P2J2 1179 aa9.47□□□□□ -0.89
SSR3-201ENST00000265044 PCDHA11Q9Y5I1 949 aa9.47□□□□□ -0.89
SSR3-201ENST00000265044 A0A0G2JND7 137 aa9.47□□□□□ -0.89
SSR3-201ENST00000265044 PABPN1LA6NDY0 278 aaKnown RBP9.47□□□□□ -0.89
SSR3-201ENST00000265044 FAM107AO95990 144 aa9.47□□□□□ -0.89
SSR3-201ENST00000265044 SP100P23497 879 aaPredicted RBP9.47□□□□□ -0.89
SSR3-201ENST00000265044 HNRNPDQ14103 355 aaKnown RBP9.47□□□□□ -0.89
SSR3-201ENST00000265044 CRYMQ14894 314 aa9.47□□□□□ -0.89
SSR3-201ENST00000265044 CNGA3Q16281 694 aa9.47□□□□□ -0.89
SSR3-201ENST00000265044 UGP2Q16851 508 aa9.47□□□□□ -0.89
SSR3-201ENST00000265044 ADGRF1Q5T601 910 aa9.47□□□□□ -0.89
SSR3-201ENST00000265044 TMCO4Q5TGY1 634 aa9.47□□□□□ -0.89
SSR3-201ENST00000265044 OTUD1Q5VV17 481 aaPredicted RBP9.47□□□□□ -0.89
SSR3-201ENST00000265044 TAS2R42Q7RTR8 314 aa9.47□□□□□ -0.89
SSR3-201ENST00000265044 UNC5BQ8IZJ1 945 aa9.47□□□□□ -0.89
SSR3-201ENST00000265044 MICALL1Q8N3F8 863 aa9.47□□□□□ -0.89
SSR3-201ENST00000265044 LPCAT1Q8NF37 534 aa9.47□□□□□ -0.89
SSR3-201ENST00000265044 ING5Q8WYH8 240 aa9.47□□□□□ -0.89
SSR3-201ENST00000265044 CIPCQ9C0C6 399 aa9.47□□□□□ -0.89
SSR3-201ENST00000265044 SARS2Q9NP81 518 aaKnown RBP9.47□□□□□ -0.89
SSR3-201ENST00000265044 CXXC1Q9P0U4 656 aaPredicted RBP9.47□□□□□ -0.89
SSR3-201ENST00000265044 DPP7Q9UHL4 492 aa9.47□□□□□ -0.89
SSR3-201ENST00000265044 A0A1B0GVM2 712 aa9.47□□□□□ -0.89
SSR3-201ENST00000265044 TCAF2A6NFQ2 919 aa9.47□□□□□ -0.89
SSR3-201ENST00000265044 TGM5O43548 720 aa9.47□□□□□ -0.89
SSR3-201ENST00000265044 RPA3P35244 121 aaPredicted RBP9.47□□□□□ -0.89
SSR3-201ENST00000265044 CHRNA4P43681 627 aa9.47□□□□□ -0.89
SSR3-201ENST00000265044 NDST2P52849 883 aa9.47□□□□□ -0.89
SSR3-201ENST00000265044 RAB33AQ14088 237 aa9.47□□□□□ -0.89
SSR3-201ENST00000265044 PARP15Q460N3 678 aa9.47□□□□□ -0.89
SSR3-201ENST00000265044 BEND5Q7L4P6 421 aa9.47□□□□□ -0.89
SSR3-201ENST00000265044 SDCCAG8Q86SQ7 713 aaPredicted RBP9.47□□□□□ -0.89
SSR3-201ENST00000265044 PRPF39Q86UA1 669 aaKnown RBP9.47□□□□□ -0.89
SSR3-201ENST00000265044 TRABD2AQ86V40 505 aa9.47□□□□□ -0.89
SSR3-201ENST00000265044 CAND1Q86VP6 1230 aaKnown RBP9.47□□□□□ -0.89
SSR3-201ENST00000265044 ELMO2Q96JJ3 720 aa9.47□□□□□ -0.89
SSR3-201ENST00000265044 GPR63Q9BZJ6 419 aa9.47□□□□□ -0.89
SSR3-201ENST00000265044 CWH43Q9H720 699 aa9.47□□□□□ -0.89
SSR3-201ENST00000265044 CLUHO75153 1309 aa9.47□□□□□ -0.89
SSR3-201ENST00000265044 ZWINTO95229 277 aa9.46□□□□□ -0.89
SSR3-201ENST00000265044 HLA-DQB2P05538 268 aa9.46□□□□□ -0.89
SSR3-201ENST00000265044 MLNP12872 115 aa9.46□□□□□ -0.89
SSR3-201ENST00000265044 GP5P40197 560 aa9.46□□□□□ -0.89
SSR3-201ENST00000265044 SERPINH1P50454 418 aaKnown RBP9.46□□□□□ -0.89
SSR3-201ENST00000265044 PRKD1Q15139 912 aaPredicted RBP9.46□□□□□ -0.89
SSR3-201ENST00000265044 SPANXN3Q5MJ09 141 aa9.46□□□□□ -0.89
SSR3-201ENST00000265044 FAM43BQ6ZT52 329 aaPredicted RBP9.46□□□□□ -0.89
SSR3-201ENST00000265044 TRIM42Q8IWZ5 723 aa9.46□□□□□ -0.89
SSR3-201ENST00000265044 OR6K2Q8NGY2 324 aa9.46□□□□□ -0.89
SSR3-201ENST00000265044 ARNTL2Q8WYA1 636 aa9.46□□□□□ -0.89
SSR3-201ENST00000265044 MAML1Q92585 1016 aa9.46□□□□□ -0.89
SSR3-201ENST00000265044 TMEM109Q9BVC6 243 aa9.46□□□□□ -0.89
SSR3-201ENST00000265044 MCOLN1Q9GZU1 580 aa9.46□□□□□ -0.89
SSR3-201ENST00000265044 CRISPLD2Q9H0B8 497 aa9.46□□□□□ -0.89
SSR3-201ENST00000265044 SMG9Q9H0W8 520 aaKnown RBP9.46□□□□□ -0.89
SSR3-201ENST00000265044 TLE6Q9H808 572 aa9.46□□□□□ -0.89
SSR3-201ENST00000265044 TEX264Q9Y6I9 313 aa9.46□□□□□ -0.89
SSR3-201ENST00000265044 GON4LQ3T8J9 2241 aa9.46□□□□□ -0.89
SSR3-201ENST00000265044 A0A0D9SEW6 157 aa9.46□□□□□ -0.89
SSR3-201ENST00000265044 ADRA1DP25100 572 aa9.46□□□□□ -0.89
SSR3-201ENST00000265044 ITGB8P26012 769 aa9.46□□□□□ -0.89
SSR3-201ENST00000265044 MXRA7P84157 204 aa9.46□□□□□ -0.89
SSR3-201ENST00000265044 MRPL58Q14197 206 aaKnown RBP9.46□□□□□ -0.89
SSR3-201ENST00000265044 ZRSR2Q15696 482 aaKnown RBP9.46□□□□□ -0.89
SSR3-201ENST00000265044 FASTKD1Q53R41 847 aaKnown RBP9.46□□□□□ -0.89
SSR3-201ENST00000265044 PCID2Q5JVF3 399 aa9.46□□□□□ -0.89
SSR3-201ENST00000265044 ACBD5Q5T8D3 534 aaPredicted RBP9.46□□□□□ -0.89
SSR3-201ENST00000265044 ATG16L1Q676U5 607 aa9.46□□□□□ -0.89
SSR3-201ENST00000265044 ZNF470Q6ECI4 717 aa9.46□□□□□ -0.89
SSR3-201ENST00000265044 C10orf67Q8IYJ2 551 aa9.46□□□□□ -0.89
SSR3-201ENST00000265044 HJURPQ8NCD3 748 aaPredicted RBP9.46□□□□□ -0.89
SSR3-201ENST00000265044 TBRG4Q969Z0 631 aaKnown RBP eCLIP9.46□□□□□ -0.89
SSR3-201ENST00000265044 C1orf74Q96LT6 269 aa9.46□□□□□ -0.89
SSR3-201ENST00000265044 C2orf49Q9BVC5 232 aaPredicted RBP9.46□□□□□ -0.89
SSR3-201ENST00000265044 TXLNGYQ9BZA5 131 aa9.46□□□□□ -0.89
SSR3-201ENST00000265044 UNKQ9C0B0 810 aaKnown RBP9.46□□□□□ -0.89
SSR3-201ENST00000265044 TLR9Q9NR96 1032 aa9.46□□□□□ -0.89
SSR3-201ENST00000265044 COMMD8Q9NX08 183 aa9.46□□□□□ -0.89
SSR3-201ENST00000265044 GRID1Q9ULK0 1009 aa9.46□□□□□ -0.89
SSR3-201ENST00000265044 STX7O15400 261 aaKnown RBP9.46□□□□□ -0.9
SSR3-201ENST00000265044 RFPL2O75678 378 aa9.46□□□□□ -0.9
SSR3-201ENST00000265044 PPP3CCP48454 512 aa9.46□□□□□ -0.9
SSR3-201ENST00000265044 CDH4P55283 916 aa9.46□□□□□ -0.9
SSR3-201ENST00000265044 GALNT3Q14435 633 aa9.46□□□□□ -0.9
SSR3-201ENST00000265044 CBX2Q14781 532 aaPredicted RBP9.46□□□□□ -0.9
SSR3-201ENST00000265044 FAM133BQ5BKY9 247 aaKnown RBP9.46□□□□□ -0.9
SSR3-201ENST00000265044 MSANTD2Q6P1R3 559 aa9.46□□□□□ -0.9
SSR3-201ENST00000265044 TMC5Q6UXY8 1006 aa9.46□□□□□ -0.9
SSR3-201ENST00000265044 TBC1D1Q86TI0 1168 aaPredicted RBP9.46□□□□□ -0.9
SSR3-201ENST00000265044 SCML4Q8N228 414 aa9.46□□□□□ -0.9
SSR3-201ENST00000265044 TTC8Q8TAM2 541 aa9.46□□□□□ -0.9
SSR3-201ENST00000265044 SKA2Q8WVK7 121 aaPredicted RBP9.46□□□□□ -0.9
SSR3-201ENST00000265044 PLD4Q96BZ4 506 aa9.46□□□□□ -0.9
SSR3-201ENST00000265044 ARMC5Q96C12 935 aa9.46□□□□□ -0.9
SSR3-201ENST00000265044 TLCD1Q96CP7 247 aa9.46□□□□□ -0.9
SSR3-201ENST00000265044 OLFM3Q96PB7 478 aa9.46□□□□□ -0.9
SSR3-201ENST00000265044 C12orf65Q9H3J6 166 aaKnown RBP9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms