RNA–Protein interactions for RNA: ENST00000263187.3

MSH4-201, Transcript of mutS homolog 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH4, Length 3,266 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4-201ENST00000263187 MFN1Q8IWA4 741 aa9.27□□□□□ -0.92
MSH4-201ENST00000263187 PQLC1Q8N2U9 271 aa9.27□□□□□ -0.92
MSH4-201ENST00000263187 LINC01465Q8N7H1 131 aa9.27□□□□□ -0.92
MSH4-201ENST00000263187 PPTC7Q8NI37 304 aa9.27□□□□□ -0.92
MSH4-201ENST00000263187 GRIN3AQ8TCU5 1115 aa9.27□□□□□ -0.92
MSH4-201ENST00000263187 MPP4Q96JB8 637 aa9.27□□□□□ -0.92
MSH4-201ENST00000263187 TSNARE1Q96NA8 513 aa9.27□□□□□ -0.92
MSH4-201ENST00000263187 TRAPPC9Q96Q05 1148 aa9.27□□□□□ -0.92
MSH4-201ENST00000263187 PKP2Q99959 881 aa9.27□□□□□ -0.92
MSH4-201ENST00000263187 DUSP16Q9BY84 665 aa9.27□□□□□ -0.92
MSH4-201ENST00000263187 TRIM8Q9BZR9 551 aa9.27□□□□□ -0.92
MSH4-201ENST00000263187 HEMK1Q9Y5R4 338 aaPredicted RBP9.27□□□□□ -0.92
MSH4-201ENST00000263187 CASTOR2A6NHX0 329 aa9.27□□□□□ -0.93
MSH4-201ENST00000263187 ASB14A6NK59 587 aa9.27□□□□□ -0.93
MSH4-201ENST00000263187 HACD1B0YJ81 288 aa9.27□□□□□ -0.93
MSH4-201ENST00000263187 DCLK1O15075 740 aa9.27□□□□□ -0.93
MSH4-201ENST00000263187 SNAI1O95863 264 aaPredicted RBP9.27□□□□□ -0.93
MSH4-201ENST00000263187 SBK3P0C264 359 aa9.27□□□□□ -0.93
MSH4-201ENST00000263187 NOS2P35228 1153 aa9.27□□□□□ -0.93
MSH4-201ENST00000263187 GLUD2P49448 558 aa9.27□□□□□ -0.93
MSH4-201ENST00000263187 CDKL1Q00532 357 aa9.27□□□□□ -0.93
MSH4-201ENST00000263187 DPYSQ14117 519 aa9.27□□□□□ -0.93
MSH4-201ENST00000263187 CSHL1Q14406 222 aa9.27□□□□□ -0.93
MSH4-201ENST00000263187 ZBTB6Q15916 424 aa9.27□□□□□ -0.93
MSH4-201ENST00000263187 CCDC153Q494R4 210 aa9.27□□□□□ -0.93
MSH4-201ENST00000263187 C4orf22Q6V702 233 aa9.27□□□□□ -0.93
MSH4-201ENST00000263187 BNC2Q6ZN30 1099 aaPredicted RBP9.27□□□□□ -0.93
MSH4-201ENST00000263187 MFSD6LQ8IWD5 586 aa9.27□□□□□ -0.93
MSH4-201ENST00000263187 RYBPQ8N488 228 aaPredicted RBP9.27□□□□□ -0.93
MSH4-201ENST00000263187 FAM110BQ8TC76 370 aa9.27□□□□□ -0.93
MSH4-201ENST00000263187 ATP6V1E2Q96A05 226 aa9.27□□□□□ -0.93
MSH4-201ENST00000263187 ELMO2Q96JJ3 720 aa9.27□□□□□ -0.93
MSH4-201ENST00000263187 WDR41Q9HAD4 459 aa9.27□□□□□ -0.93
MSH4-201ENST00000263187 TNFRSF12AQ9NP84 129 aa9.27□□□□□ -0.93
MSH4-201ENST00000263187 OXSMQ9NWU1 459 aa9.27□□□□□ -0.93
MSH4-201ENST00000263187 CCDC167Q9P0B6 97 aa9.27□□□□□ -0.93
MSH4-201ENST00000263187 STAP1Q9ULZ2 295 aa9.27□□□□□ -0.93
MSH4-201ENST00000263187 UBQLN1Q9UMX0 589 aaKnown RBP9.27□□□□□ -0.93
MSH4-201ENST00000263187 MSI1O43347 362 aaKnown RBP9.27□□□□□ -0.93
MSH4-201ENST00000263187 GRID2O43424 1007 aa9.27□□□□□ -0.93
MSH4-201ENST00000263187 DLX3O60479 287 aa9.27□□□□□ -0.93
MSH4-201ENST00000263187 LRIG2O94898 1065 aa9.27□□□□□ -0.93
MSH4-201ENST00000263187 CTSHP09668 335 aa9.27□□□□□ -0.93
MSH4-201ENST00000263187 EPHX2P34913 555 aa9.27□□□□□ -0.93
MSH4-201ENST00000263187 GJA5P36382 358 aa9.27□□□□□ -0.93
MSH4-201ENST00000263187 CHN2P52757 468 aa9.27□□□□□ -0.93
MSH4-201ENST00000263187 ZNF789Q5FWF6 425 aa9.27□□□□□ -0.93
MSH4-201ENST00000263187 AAGABQ6PD74 315 aa9.27□□□□□ -0.93
MSH4-201ENST00000263187 AMIGO2Q86SJ2 522 aa9.27□□□□□ -0.93
MSH4-201ENST00000263187 UNC93AQ86WB7 457 aa9.27□□□□□ -0.93
MSH4-201ENST00000263187 OR9I1Q8NGQ6 314 aa9.27□□□□□ -0.93
MSH4-201ENST00000263187 APBB2Q92870 758 aa9.27□□□□□ -0.93
MSH4-201ENST00000263187 ZNF419Q96HQ0 510 aaPredicted RBP9.27□□□□□ -0.93
MSH4-201ENST00000263187 KLHL32Q96NJ5 620 aa9.27□□□□□ -0.93
MSH4-201ENST00000263187 NPY6RQ99463 290 aa9.27□□□□□ -0.93
MSH4-201ENST00000263187 ADAMTS10Q9H324 1103 aa9.27□□□□□ -0.93
MSH4-201ENST00000263187 WDCPQ9H6R7 721 aa9.27□□□□□ -0.93
MSH4-201ENST00000263187 NDFIP2Q9NV92 336 aa9.27□□□□□ -0.93
MSH4-201ENST00000263187 GIMAP2Q9UG22 337 aa9.27□□□□□ -0.93
MSH4-201ENST00000263187 LZTS1Q9Y250 596 aa9.27□□□□□ -0.93
MSH4-201ENST00000263187 ANKRD12Q6UB98 2062 aa9.26□□□□□ -0.93
MSH4-201ENST00000263187 MATN2O00339 956 aa9.26□□□□□ -0.93
MSH4-201ENST00000263187 PIRO00625 290 aa9.26□□□□□ -0.93
MSH4-201ENST00000263187 XPO1O14980 1071 aaKnown RBP9.26□□□□□ -0.93
MSH4-201ENST00000263187 HDAC3O15379 428 aa9.26□□□□□ -0.93
MSH4-201ENST00000263187 GPR32O75388 356 aa9.26□□□□□ -0.93
MSH4-201ENST00000263187 CRTAMO95727 393 aa9.26□□□□□ -0.93
MSH4-201ENST00000263187 MMP3P08254 477 aa9.26□□□□□ -0.93
MSH4-201ENST00000263187 CCNA1P78396 465 aa9.26□□□□□ -0.93
MSH4-201ENST00000263187 ITKQ08881 620 aa9.26□□□□□ -0.93
MSH4-201ENST00000263187 SLC5A9Q2M3M2 681 aa9.26□□□□□ -0.93
MSH4-201ENST00000263187 DCAF4L1Q3SXM0 396 aa9.26□□□□□ -0.93
MSH4-201ENST00000263187 C9orf131Q5VYM1 1079 aa9.26□□□□□ -0.93
MSH4-201ENST00000263187 ZNF354CQ86Y25 554 aa9.26□□□□□ -0.93
MSH4-201ENST00000263187 CRYBG2Q8N1P7 616 aa9.26□□□□□ -0.93
MSH4-201ENST00000263187 CNTD1Q8N815 330 aa9.26□□□□□ -0.93
MSH4-201ENST00000263187 NAT14Q8WUY8 206 aa9.26□□□□□ -0.93
MSH4-201ENST00000263187 TNIP3Q96KP6 325 aa9.26□□□□□ -0.93
MSH4-201ENST00000263187 RTKNQ9BST9 563 aa9.26□□□□□ -0.93
MSH4-201ENST00000263187 FICDQ9BVA6 458 aa9.26□□□□□ -0.93
MSH4-201ENST00000263187 BRD8Q9H0E9 1235 aa9.26□□□□□ -0.93
MSH4-201ENST00000263187 LIN28AQ9H9Z2 209 aaKnown RBP9.26□□□□□ -0.93
MSH4-201ENST00000263187 CRTAC1Q9NQ79 661 aa9.26□□□□□ -0.93
MSH4-201ENST00000263187 SORCS3Q9UPU3 1222 aa9.26□□□□□ -0.93
MSH4-201ENST00000263187 GNEQ9Y223 722 aaKnown RBP9.26□□□□□ -0.93
MSH4-201ENST00000263187 CDYLQ9Y232 598 aa9.26□□□□□ -0.93
MSH4-201ENST00000263187 AP4B1Q9Y6B7 739 aa9.26□□□□□ -0.93
MSH4-201ENST00000263187 TTC3P53804 2025 aa9.26□□□□□ -0.93
MSH4-201ENST00000263187 RGSL1A5PLK6 1076 aa9.26□□□□□ -0.93
MSH4-201ENST00000263187 TPST1O60507 370 aa9.26□□□□□ -0.93
MSH4-201ENST00000263187 FBXO21O94952 628 aa9.26□□□□□ -0.93
MSH4-201ENST00000263187 PGK1P00558 417 aa9.26□□□□□ -0.93
MSH4-201ENST00000263187 FAM200BP0CF97 657 aa9.26□□□□□ -0.93
MSH4-201ENST00000263187 SLC35E2BP0CK96 405 aa9.26□□□□□ -0.93
MSH4-201ENST00000263187 SMIM10L2AP0DMW4 78 aa9.26□□□□□ -0.93
MSH4-201ENST00000263187 SMIM10L2BP0DMW5 78 aa9.26□□□□□ -0.93
MSH4-201ENST00000263187 THRAP10827 490 aa9.26□□□□□ -0.93
MSH4-201ENST00000263187 CYP2B6P20813 491 aa9.26□□□□□ -0.93
MSH4-201ENST00000263187 KCNA5P22460 613 aa9.26□□□□□ -0.93
MSH4-201ENST00000263187 ACADSBP45954 432 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms