RNA–Protein interactions for RNA: ENST00000261366.9

LMNB1-201, Transcript of lamin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMNB1, Length 2,878 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-201ENST00000261366 ZNF23P17027 643 aa16.15■□□□□ 0.18
LMNB1-201ENST00000261366 NR2C2P49116 596 aa16.15■□□□□ 0.18
LMNB1-201ENST00000261366 CBX3Q13185 183 aa16.15■□□□□ 0.18
LMNB1-201ENST00000261366 PPP1R3AQ16821 1122 aa16.15■□□□□ 0.18
LMNB1-201ENST00000261366 DCAF6Q58WW2 860 aa16.15■□□□□ 0.18
LMNB1-201ENST00000261366 C4orf22Q6V702 233 aa16.15■□□□□ 0.18
LMNB1-201ENST00000261366 KDELC2Q7Z4H8 507 aa16.15■□□□□ 0.18
LMNB1-201ENST00000261366 OR9I1Q8NGQ6 314 aa16.15■□□□□ 0.18
LMNB1-201ENST00000261366 FNDC8Q8TC99 324 aa16.15■□□□□ 0.18
LMNB1-201ENST00000261366 TRPM4Q8TD43 1214 aa16.15■□□□□ 0.18
LMNB1-201ENST00000261366 GIPC3Q8TF64 312 aa16.15■□□□□ 0.18
LMNB1-201ENST00000261366 TSNARE1Q96NA8 513 aa16.15■□□□□ 0.18
LMNB1-201ENST00000261366 SLC2A11Q9BYW1 496 aa16.15■□□□□ 0.18
LMNB1-201ENST00000261366 BFARQ9NZS9 450 aa16.15■□□□□ 0.18
LMNB1-201ENST00000261366 XPR1Q9UBH6 696 aa16.15■□□□□ 0.18
LMNB1-201ENST00000261366 ATP6AP2A0A1C7CYW4 349 aa16.15■□□□□ 0.18
LMNB1-201ENST00000261366 ZBTB42B2RXF5 422 aa16.15■□□□□ 0.18
LMNB1-201ENST00000261366 ATP6AP2O75787 350 aa16.15■□□□□ 0.18
LMNB1-201ENST00000261366 IL18RAPO95256 599 aa16.15■□□□□ 0.18
LMNB1-201ENST00000261366 VTNP04004 478 aa16.15■□□□□ 0.18
LMNB1-201ENST00000261366 TSPAN8P19075 237 aa16.15■□□□□ 0.18
LMNB1-201ENST00000261366 HSPA13P48723 471 aa16.15■□□□□ 0.18
LMNB1-201ENST00000261366 MBTD1Q05BQ5 628 aa16.15■□□□□ 0.18
LMNB1-201ENST00000261366 AGKQ53H12 422 aa16.15■□□□□ 0.18
LMNB1-201ENST00000261366 DCAF15Q66K64 600 aa16.15■□□□□ 0.18
LMNB1-201ENST00000261366 ZBTB49Q6ZSB9 765 aa16.15■□□□□ 0.18
LMNB1-201ENST00000261366 FSTL5Q8N475 847 aaPredicted RBP16.15■□□□□ 0.18
LMNB1-201ENST00000261366 CXorf38Q8TB03 319 aa16.15■□□□□ 0.18
LMNB1-201ENST00000261366 LRRC40Q9H9A6 602 aa16.15■□□□□ 0.18
LMNB1-201ENST00000261366 OLAHQ9NV23 265 aa16.15■□□□□ 0.18
LMNB1-201ENST00000261366 DNAH12Q6ZR08 3092 aa16.14■□□□□ 0.17
LMNB1-201ENST00000261366 IGKV6D-21A0A0A0MT36 114 aa16.14■□□□□ 0.17
LMNB1-201ENST00000261366 TMEM114B3SHH9 223 aa16.14■□□□□ 0.17
LMNB1-201ENST00000261366 FZD9O00144 591 aa16.14■□□□□ 0.17
LMNB1-201ENST00000261366 SBK3P0C264 359 aa16.14■□□□□ 0.17
LMNB1-201ENST00000261366 MLNP12872 115 aa16.14■□□□□ 0.17
LMNB1-201ENST00000261366 NMBRP28336 390 aa16.14■□□□□ 0.17
LMNB1-201ENST00000261366 SULT1E1P49888 294 aa16.14■□□□□ 0.17
LMNB1-201ENST00000261366 LIPMQ5VYY2 423 aa16.14■□□□□ 0.17
LMNB1-201ENST00000261366 FASTKD5Q7L8L6 764 aaKnown RBP16.14■□□□□ 0.17
LMNB1-201ENST00000261366 ERI1Q8IV48 349 aaKnown RBP16.14■□□□□ 0.17
LMNB1-201ENST00000261366 TRIM8Q9BZR9 551 aa16.14■□□□□ 0.17
LMNB1-201ENST00000261366 PAIP1Q9H074 479 aaKnown RBP16.14■□□□□ 0.17
LMNB1-201ENST00000261366 FZD8Q9H461 694 aa16.14■□□□□ 0.17
LMNB1-201ENST00000261366 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.14■□□□□ 0.17
LMNB1-201ENST00000261366 PRORSD1PA6NEY8 169 aa16.14■□□□□ 0.17
LMNB1-201ENST00000261366 XPOTO43592 962 aaKnown RBP16.14■□□□□ 0.17
LMNB1-201ENST00000261366 PGK2P07205 417 aa16.14■□□□□ 0.17
LMNB1-201ENST00000261366 CDK9P50750 372 aaKnown RBP16.14■□□□□ 0.17
LMNB1-201ENST00000261366 POU5F1BQ06416 359 aa16.14■□□□□ 0.17
LMNB1-201ENST00000261366 CTBP1Q13363 440 aa16.14■□□□□ 0.17
LMNB1-201ENST00000261366 XKR5Q6UX68 686 aa16.14■□□□□ 0.17
LMNB1-201ENST00000261366 CYS1Q717R9 158 aa16.14■□□□□ 0.17
LMNB1-201ENST00000261366 CHST15Q7LFX5 561 aaPredicted RBP16.14■□□□□ 0.17
LMNB1-201ENST00000261366 USP33Q8TEY7 942 aa16.14■□□□□ 0.17
LMNB1-201ENST00000261366 DRC3Q9H069 523 aa16.14■□□□□ 0.17
LMNB1-201ENST00000261366 C2orf40Q9H1Z8 148 aa16.14■□□□□ 0.17
LMNB1-201ENST00000261366 CYP3A43Q9HB55 503 aa16.14■□□□□ 0.17
LMNB1-201ENST00000261366 ZCWPW2A0A1B0GU75 182 aa16.13■□□□□ 0.17
LMNB1-201ENST00000261366 C9IYK1 514 aa16.13■□□□□ 0.17
LMNB1-201ENST00000261366 BTBD19C9JJ37 291 aa16.13■□□□□ 0.17
LMNB1-201ENST00000261366 TRIM38O00635 465 aa16.13■□□□□ 0.17
LMNB1-201ENST00000261366 SOCS2O14508 198 aa16.13■□□□□ 0.17
LMNB1-201ENST00000261366 DPYSL4O14531 572 aa16.13■□□□□ 0.17
LMNB1-201ENST00000261366 CTBSQ01459 385 aa16.13■□□□□ 0.17
LMNB1-201ENST00000261366 SPANXN3Q5MJ09 141 aa16.13■□□□□ 0.17
LMNB1-201ENST00000261366 DEFB106AQ8N104 65 aa16.13■□□□□ 0.17
LMNB1-201ENST00000261366 LSMEM2Q8N112 164 aa16.13■□□□□ 0.17
LMNB1-201ENST00000261366 SLC35F5Q8WV83 523 aa16.13■□□□□ 0.17
LMNB1-201ENST00000261366 CNDP1Q96KN2 507 aa16.13■□□□□ 0.17
LMNB1-201ENST00000261366 RPL10LQ96L21 214 aaKnown RBP16.13■□□□□ 0.17
LMNB1-201ENST00000261366 AKT3Q9Y243 479 aa16.13■□□□□ 0.17
LMNB1-201ENST00000261366 H3BNH8 94 aa16.13■□□□□ 0.17
LMNB1-201ENST00000261366 DLX3O60479 287 aa16.13■□□□□ 0.17
LMNB1-201ENST00000261366 GRIA3P42263 894 aa16.13■□□□□ 0.17
LMNB1-201ENST00000261366 PRKAA1Q13131 559 aa16.13■□□□□ 0.17
LMNB1-201ENST00000261366 SLC44A4Q53GD3 710 aa16.13■□□□□ 0.17
LMNB1-201ENST00000261366 PATL1Q86TB9 770 aaKnown RBP16.13■□□□□ 0.17
LMNB1-201ENST00000261366 DENND6AQ8IWF6 608 aa16.13■□□□□ 0.17
LMNB1-201ENST00000261366 FIBCD1Q8N539 461 aa16.13■□□□□ 0.17
LMNB1-201ENST00000261366 RNF139Q8WU17 664 aa16.13■□□□□ 0.17
LMNB1-201ENST00000261366 PPP1R13LQ8WUF5 828 aa16.13■□□□□ 0.17
LMNB1-201ENST00000261366 DLG3Q92796 817 aa16.13■□□□□ 0.17
LMNB1-201ENST00000261366 NXNL1Q96CM4 212 aa16.13■□□□□ 0.17
LMNB1-201ENST00000261366 PCDHGA7Q9Y5G6 932 aa16.13■□□□□ 0.17
LMNB1-201ENST00000261366 EVPLQ92817 2033 aa16.13■□□□□ 0.17
LMNB1-201ENST00000261366 ZBTB24O43167 697 aaPredicted RBP16.12■□□□□ 0.17
LMNB1-201ENST00000261366 NUMBP49757 651 aa16.12■□□□□ 0.17
LMNB1-201ENST00000261366 TRIM25Q14258 630 aaKnown RBP16.12■□□□□ 0.17
LMNB1-201ENST00000261366 GPR141Q7Z602 305 aa16.12■□□□□ 0.17
LMNB1-201ENST00000261366 NT5DC4Q86YG4 428 aa16.12■□□□□ 0.17
LMNB1-201ENST00000261366 SLCO4A1Q96BD0 722 aa16.12■□□□□ 0.17
LMNB1-201ENST00000261366 C12orf43Q96C57 262 aaKnown RBP16.12■□□□□ 0.17
LMNB1-201ENST00000261366 AS3MTQ9HBK9 375 aa16.12■□□□□ 0.17
LMNB1-201ENST00000261366 FAM72CH0Y354 149 aa16.12■□□□□ 0.17
LMNB1-201ENST00000261366 HTRA2O43464 458 aaPredicted RBP16.12■□□□□ 0.17
LMNB1-201ENST00000261366 MPOP05164 745 aa16.12■□□□□ 0.17
LMNB1-201ENST00000261366 RBP5P82980 135 aa16.12■□□□□ 0.17
LMNB1-201ENST00000261366 MPP1Q00013 466 aa16.12■□□□□ 0.17
LMNB1-201ENST00000261366 GJC2Q5T442 439 aaPredicted RBP16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms