RNA–Protein interactions for RNA: ENST00000249837.7

VPS13C-201, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VPS13C, Length 13,300 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-201ENST00000249837 TGDSO95455 350 aa4.68□□□□□ -1.66
VPS13C-201ENST00000249837 NDUFV1P49821 464 aa4.68□□□□□ -1.66
VPS13C-201ENST00000249837 PRKAA2P54646 552 aa4.68□□□□□ -1.66
VPS13C-201ENST00000249837 MSLNQ13421 630 aaPredicted RBP4.68□□□□□ -1.66
VPS13C-201ENST00000249837 DCTN2Q13561 401 aaKnown RBP4.68□□□□□ -1.66
VPS13C-201ENST00000249837 FAM117BQ6P1L5 589 aa4.68□□□□□ -1.66
VPS13C-201ENST00000249837 PHTF2Q8N3S3 785 aa4.68□□□□□ -1.66
VPS13C-201ENST00000249837 DCUN1D1Q96GG9 259 aa4.68□□□□□ -1.66
VPS13C-201ENST00000249837 PAIP2BQ9ULR5 123 aaKnown RBP4.68□□□□□ -1.66
VPS13C-201ENST00000249837 RAP2CQ9Y3L5 183 aa4.68□□□□□ -1.66
VPS13C-201ENST00000249837 SOWAHBA6NEL2 793 aa4.67□□□□□ -1.66
VPS13C-201ENST00000249837 MT-ND1P03886 318 aa4.67□□□□□ -1.66
VPS13C-201ENST00000249837 LMO2P25791 158 aa4.67□□□□□ -1.66
VPS13C-201ENST00000249837 IVDP26440 423 aa4.67□□□□□ -1.66
VPS13C-201ENST00000249837 SLC10A6Q3KNW5 377 aa4.67□□□□□ -1.66
VPS13C-201ENST00000249837 MGAT5BQ3V5L5 792 aa4.67□□□□□ -1.66
VPS13C-201ENST00000249837 PITRM1Q5JRX3 1037 aa4.67□□□□□ -1.66
VPS13C-201ENST00000249837 SLC27A1Q6PCB7 646 aa4.67□□□□□ -1.66
VPS13C-201ENST00000249837 SZRD1Q7Z422 152 aa4.67□□□□□ -1.66
VPS13C-201ENST00000249837 TREML1Q86YW5 311 aa4.67□□□□□ -1.66
VPS13C-201ENST00000249837 MICU2Q8IYU8 434 aa4.67□□□□□ -1.66
VPS13C-201ENST00000249837 DHRSXQ8N5I4 330 aa4.67□□□□□ -1.66
VPS13C-201ENST00000249837 UBR7Q8N806 425 aa4.67□□□□□ -1.66
VPS13C-201ENST00000249837 DGCR14Q96DF8 476 aaKnown RBP4.67□□□□□ -1.66
VPS13C-201ENST00000249837 C7orf26Q96N11 449 aa4.67□□□□□ -1.66
VPS13C-201ENST00000249837 TBCDQ9BTW9 1192 aa4.67□□□□□ -1.66
VPS13C-201ENST00000249837 BEGAINQ9BUH8 593 aa4.67□□□□□ -1.66
VPS13C-201ENST00000249837 SLC25A23Q9BV35 468 aa4.67□□□□□ -1.66
VPS13C-201ENST00000249837 NOL11Q9H8H0 719 aaKnown RBP4.67□□□□□ -1.66
VPS13C-201ENST00000249837 PSMD13Q9UNM6 376 aa4.67□□□□□ -1.66
VPS13C-201ENST00000249837 BTRCQ9Y297 605 aa4.67□□□□□ -1.66
VPS13C-201ENST00000249837 SCN1AP35498 2009 aa4.67□□□□□ -1.66
VPS13C-201ENST00000249837 PCM1Q15154 2024 aa4.67□□□□□ -1.66
VPS13C-201ENST00000249837 PLCH1Q4KWH8 1693 aa4.67□□□□□ -1.66
VPS13C-201ENST00000249837 SH3BGRLO75368 114 aa4.67□□□□□ -1.66
VPS13C-201ENST00000249837 FARP2O94887 1054 aaPredicted RBP4.67□□□□□ -1.66
VPS13C-201ENST00000249837 SPTBP11277 2137 aa4.67□□□□□ -1.66
VPS13C-201ENST00000249837 TFEBP19484 476 aa4.67□□□□□ -1.66
VPS13C-201ENST00000249837 AKT1P31749 480 aa4.67□□□□□ -1.66
VPS13C-201ENST00000249837 MATKP42679 507 aa4.67□□□□□ -1.66
VPS13C-201ENST00000249837 SLC5A9Q2M3M2 681 aa4.67□□□□□ -1.66
VPS13C-201ENST00000249837 GPR107Q5VW38 600 aa4.67□□□□□ -1.66
VPS13C-201ENST00000249837 AAGABQ6PD74 315 aa4.67□□□□□ -1.66
VPS13C-201ENST00000249837 RNF145Q96MT1 663 aa4.67□□□□□ -1.66
VPS13C-201ENST00000249837 NIFKQ9BYG3 293 aaKnown RBP4.67□□□□□ -1.66
VPS13C-201ENST00000249837 LNPEPQ9UIQ6 1025 aa4.67□□□□□ -1.66
VPS13C-201ENST00000249837 ANAPC2Q9UJX6 822 aa4.67□□□□□ -1.66
VPS13C-201ENST00000249837 MFHAS1Q9Y4C4 1052 aa4.67□□□□□ -1.66
VPS13C-201ENST00000249837 SLC15A5A6NIM6 579 aa4.67□□□□□ -1.66
VPS13C-201ENST00000249837 ODC1P11926 461 aa4.67□□□□□ -1.66
VPS13C-201ENST00000249837 UQCRBP14927 111 aa4.67□□□□□ -1.66
VPS13C-201ENST00000249837 ATP5F1P24539 256 aaPredicted RBP4.67□□□□□ -1.66
VPS13C-201ENST00000249837 ADORA2AP29274 412 aa4.67□□□□□ -1.66
VPS13C-201ENST00000249837 GSSP48637 474 aa4.67□□□□□ -1.66
VPS13C-201ENST00000249837 PGGT1BP53609 377 aa4.67□□□□□ -1.66
VPS13C-201ENST00000249837 CDH15P55291 814 aa4.67□□□□□ -1.66
VPS13C-201ENST00000249837 TWF1Q12792 350 aa4.67□□□□□ -1.66
VPS13C-201ENST00000249837 SDHAF4Q5VUM1 108 aa4.67□□□□□ -1.66
VPS13C-201ENST00000249837 PKN3Q6P5Z2 889 aa4.67□□□□□ -1.66
VPS13C-201ENST00000249837 RIOX2Q8IUF8 465 aa4.67□□□□□ -1.66
VPS13C-201ENST00000249837 WNT8BQ93098 351 aa4.67□□□□□ -1.66
VPS13C-201ENST00000249837 NXNL1Q96CM4 212 aa4.67□□□□□ -1.66
VPS13C-201ENST00000249837 PANX3Q96QZ0 392 aa4.67□□□□□ -1.66
VPS13C-201ENST00000249837 RTKNQ9BST9 563 aa4.67□□□□□ -1.66
VPS13C-201ENST00000249837 ASB7Q9H672 318 aa4.67□□□□□ -1.66
VPS13C-201ENST00000249837 OR12D3Q9UGF7 316 aa4.67□□□□□ -1.66
VPS13C-201ENST00000249837 SORCS3Q9UPU3 1222 aa4.67□□□□□ -1.66
VPS13C-201ENST00000249837 KNTC1P50748 2209 aa4.67□□□□□ -1.66
VPS13C-201ENST00000249837 TYW5A2RUC4 315 aaKnown RBP4.67□□□□□ -1.66
VPS13C-201ENST00000249837 SYNDIG1LA6NDD5 238 aa4.67□□□□□ -1.66
VPS13C-201ENST00000249837 TTLL13PA6NNM8 815 aa4.67□□□□□ -1.66
VPS13C-201ENST00000249837 C16orf96A6NNT2 1141 aa4.67□□□□□ -1.66
VPS13C-201ENST00000249837 ZNF682O95780 498 aa4.67□□□□□ -1.66
VPS13C-201ENST00000249837 SNRPB2P08579 225 aaKnown RBP4.67□□□□□ -1.66
VPS13C-201ENST00000249837 HOXC6P09630 235 aa4.67□□□□□ -1.66
VPS13C-201ENST00000249837 NMBRP28336 390 aa4.67□□□□□ -1.66
VPS13C-201ENST00000249837 PPARGP37231 505 aaPredicted RBP4.67□□□□□ -1.66
VPS13C-201ENST00000249837 RGS4P49798 205 aa4.67□□□□□ -1.66
VPS13C-201ENST00000249837 C9orf57Q5W0N0 161 aa4.67□□□□□ -1.66
VPS13C-201ENST00000249837 SLC22A9Q8IVM8 553 aa4.67□□□□□ -1.66
VPS13C-201ENST00000249837 TAGAPQ8N103 731 aa4.67□□□□□ -1.66
VPS13C-201ENST00000249837 TNIP2Q8NFZ5 429 aa4.67□□□□□ -1.66
VPS13C-201ENST00000249837 DMAP1Q9NPF5 467 aaPredicted RBP4.67□□□□□ -1.66
VPS13C-201ENST00000249837 LIMD1Q9UGP4 676 aa4.67□□□□□ -1.66
VPS13C-201ENST00000249837 ZNF112Q9UJU3 913 aa4.67□□□□□ -1.66
VPS13C-201ENST00000249837 ADAM28Q9UKQ2 775 aa4.67□□□□□ -1.66
VPS13C-201ENST00000249837 ABT1Q9ULW3 272 aaKnown RBP4.67□□□□□ -1.66
VPS13C-201ENST00000249837 TEX264Q9Y6I9 313 aa4.67□□□□□ -1.66
VPS13C-201ENST00000249837 H0Y626 953 aa4.67□□□□□ -1.66
VPS13C-201ENST00000249837 TBC1D4O60343 1298 aa4.67□□□□□ -1.66
VPS13C-201ENST00000249837 CABYRO75952 493 aa4.67□□□□□ -1.66
VPS13C-201ENST00000249837 TRIM16O95361 564 aa4.67□□□□□ -1.66
VPS13C-201ENST00000249837 IRF1P10914 325 aa4.67□□□□□ -1.66
VPS13C-201ENST00000249837 CCR1P32246 355 aa4.67□□□□□ -1.66
VPS13C-201ENST00000249837 RGS2P41220 211 aa4.67□□□□□ -1.66
VPS13C-201ENST00000249837 ATP6V0D2Q8N8Y2 350 aa4.67□□□□□ -1.66
VPS13C-201ENST00000249837 MFSD3Q96ES6 412 aa4.67□□□□□ -1.66
VPS13C-201ENST00000249837 PCDHAC1Q9H158 963 aa4.67□□□□□ -1.66
VPS13C-201ENST00000249837 CYTH4Q9UIA0 394 aa4.67□□□□□ -1.66
VPS13C-201ENST00000249837 NCAM2O15394 837 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms