RNA–Protein interactions for RNA: ENST00000248668.4

LRFN1-201, Transcript of leucine rich repeat and fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN1, Length 3,381 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1-201ENST00000248668 DTX3LQ8TDB6 740 aa16.02■□□□□ 0.15
LRFN1-201ENST00000248668 PABPC5Q96DU9 382 aaKnown RBP16.02■□□□□ 0.15
LRFN1-201ENST00000248668 FAM193BQ96PV7 902 aaPredicted RBP16.02■□□□□ 0.15
LRFN1-201ENST00000248668 TBL1YQ9BQ87 522 aa16.02■□□□□ 0.15
LRFN1-201ENST00000248668 FSD1LQ9BXM9 530 aa16.02■□□□□ 0.15
LRFN1-201ENST00000248668 IL22Q9GZX6 179 aa16.02■□□□□ 0.15
LRFN1-201ENST00000248668 TBC1D13Q9NVG8 400 aa16.02■□□□□ 0.15
LRFN1-201ENST00000248668 ARHGEF38Q9NXL2 777 aa16.02■□□□□ 0.15
LRFN1-201ENST00000248668 LNPEPQ9UIQ6 1025 aa16.02■□□□□ 0.15
LRFN1-201ENST00000248668 PSMD5Q16401 504 aa16.01■□□□□ 0.15
LRFN1-201ENST00000248668 TRIM71Q2Q1W2 868 aaKnown RBP16.01■□□□□ 0.15
LRFN1-201ENST00000248668 EML3Q32P44 896 aa16.01■□□□□ 0.15
LRFN1-201ENST00000248668 TRIM74Q86UV6 250 aa16.01■□□□□ 0.15
LRFN1-201ENST00000248668 TRIM73Q86UV7 250 aa16.01■□□□□ 0.15
LRFN1-201ENST00000248668 OSBPL2Q9H1P3 480 aa16.01■□□□□ 0.15
LRFN1-201ENST00000248668 A0A1B0GVG6 124 aa16.01■□□□□ 0.15
LRFN1-201ENST00000248668 CCL22O00626 93 aa16.01■□□□□ 0.15
LRFN1-201ENST00000248668 TADA2AO75478 443 aa16.01■□□□□ 0.15
LRFN1-201ENST00000248668 CNTN5O94779 1100 aa16.01■□□□□ 0.15
LRFN1-201ENST00000248668 IGLV3-25P01717 112 aa16.01■□□□□ 0.15
LRFN1-201ENST00000248668 SERPINE1P05121 402 aa16.01■□□□□ 0.15
LRFN1-201ENST00000248668 PEX6Q13608 980 aa16.01■□□□□ 0.15
LRFN1-201ENST00000248668 USP10Q14694 798 aaKnown RBP16.01■□□□□ 0.15
LRFN1-201ENST00000248668 CNGA3Q16281 694 aa16.01■□□□□ 0.15
LRFN1-201ENST00000248668 PIK3R6Q5UE93 754 aa16.01■□□□□ 0.15
LRFN1-201ENST00000248668 MAVSQ7Z434 540 aa16.01■□□□□ 0.15
LRFN1-201ENST00000248668 SLC41A1Q8IVJ1 513 aa16.01■□□□□ 0.15
LRFN1-201ENST00000248668 PPP4R1Q8TF05 950 aa16.01■□□□□ 0.15
LRFN1-201ENST00000248668 WDR60Q8WVS4 1066 aa16.01■□□□□ 0.15
LRFN1-201ENST00000248668 SCYL1Q96KG9 808 aa16.01■□□□□ 0.15
LRFN1-201ENST00000248668 BRD8Q9H0E9 1235 aa16.01■□□□□ 0.15
LRFN1-201ENST00000248668 TASP1Q9H6P5 420 aa16.01■□□□□ 0.15
LRFN1-201ENST00000248668 GLOD4Q9HC38 313 aa16.01■□□□□ 0.15
LRFN1-201ENST00000248668 SOX13Q9UN79 622 aa16.01■□□□□ 0.15
LRFN1-201ENST00000248668 RAD54BQ9Y620 910 aa16.01■□□□□ 0.15
LRFN1-201ENST00000248668 COG7P83436 770 aa16.01■□□□□ 0.15
LRFN1-201ENST00000248668 ZNF280DQ6N043 979 aa16.01■□□□□ 0.15
LRFN1-201ENST00000248668 SLC30A9Q6PML9 568 aa16.01■□□□□ 0.15
LRFN1-201ENST00000248668 RBM15BQ8NDT2 890 aaKnown RBP16.01■□□□□ 0.15
LRFN1-201ENST00000248668 SHKBP1Q8TBC3 707 aa16.01■□□□□ 0.15
LRFN1-201ENST00000248668 FAM161BQ96MY7 647 aa16.01■□□□□ 0.15
LRFN1-201ENST00000248668 SORT1Q99523 831 aa16.01■□□□□ 0.15
LRFN1-201ENST00000248668 OSBPL1AQ9BXW6 950 aa16.01■□□□□ 0.15
LRFN1-201ENST00000248668 SMOC2Q9H3U7 446 aa16.01■□□□□ 0.15
LRFN1-201ENST00000248668 RNPEPL1Q9HAU8 725 aa16.01■□□□□ 0.15
LRFN1-201ENST00000248668 TRAFD1O14545 582 aaPredicted RBP16■□□□□ 0.15
LRFN1-201ENST00000248668 SMIM24O75264 130 aa16■□□□□ 0.15
LRFN1-201ENST00000248668 NCF2P19878 526 aaPredicted RBP16■□□□□ 0.15
LRFN1-201ENST00000248668 ETFBP38117 255 aa16■□□□□ 0.15
LRFN1-201ENST00000248668 FAM171A1Q5VUB5 890 aa16■□□□□ 0.15
LRFN1-201ENST00000248668 GLT1D1Q96MS3 346 aa16■□□□□ 0.15
LRFN1-201ENST00000248668 VAT1Q99536 393 aa16■□□□□ 0.15
LRFN1-201ENST00000248668 CATSPERBQ9H7T0 1116 aa16■□□□□ 0.15
LRFN1-201ENST00000248668 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16■□□□□ 0.15
LRFN1-201ENST00000248668 J3KR12 359 aa16■□□□□ 0.15
LRFN1-201ENST00000248668 GABRB3P28472 473 aa16■□□□□ 0.15
LRFN1-201ENST00000248668 PGM1P36871 562 aa16■□□□□ 0.15
LRFN1-201ENST00000248668 NPY2RP49146 381 aa16■□□□□ 0.15
LRFN1-201ENST00000248668 ALFQ53S48 1182 aa16■□□□□ 0.15
LRFN1-201ENST00000248668 RNF180Q86T96 592 aa16■□□□□ 0.15
LRFN1-201ENST00000248668 PCSK9Q8NBP7 692 aaKnown RBP16■□□□□ 0.15
LRFN1-201ENST00000248668 KCTD4Q8WVF5 259 aa16■□□□□ 0.15
LRFN1-201ENST00000248668 DPF3Q92784 378 aa16■□□□□ 0.15
LRFN1-201ENST00000248668 SGF29Q96ES7 293 aa16■□□□□ 0.15
LRFN1-201ENST00000248668 SEPT5Q99719 369 aaPredicted RBP16■□□□□ 0.15
LRFN1-201ENST00000248668 NT5MQ9NPB1 228 aa16■□□□□ 0.15
LRFN1-201ENST00000248668 IPO11Q9UI26 975 aaKnown RBP16■□□□□ 0.15
LRFN1-201ENST00000248668 TLL2Q9Y6L7 1015 aa16■□□□□ 0.15
LRFN1-201ENST00000248668 ERI2A8K979 691 aaKnown RBP16■□□□□ 0.15
LRFN1-201ENST00000248668 KRT36O76013 467 aa16■□□□□ 0.15
LRFN1-201ENST00000248668 HSPA4LO95757 839 aa16■□□□□ 0.15
LRFN1-201ENST00000248668 IL1BP01584 269 aa16■□□□□ 0.15
LRFN1-201ENST00000248668 PDHA1P08559 390 aa16■□□□□ 0.15
LRFN1-201ENST00000248668 NAB1Q13506 487 aa16■□□□□ 0.15
LRFN1-201ENST00000248668 CTXN3Q4LDR2 81 aa16■□□□□ 0.15
LRFN1-201ENST00000248668 VARS2Q5ST30 1063 aaKnown RBP16■□□□□ 0.15
LRFN1-201ENST00000248668 ZNF781Q8N8C0 355 aa16■□□□□ 0.15
LRFN1-201ENST00000248668 PCDHB8Q9UN66 801 aa16■□□□□ 0.15
LRFN1-201ENST00000248668 AURKAO14965 403 aa15.99■□□□□ 0.15
LRFN1-201ENST00000248668 GJB3O75712 270 aa15.99■□□□□ 0.15
LRFN1-201ENST00000248668 ZMPSTE24O75844 475 aa15.99■□□□□ 0.15
LRFN1-201ENST00000248668 AHSGP02765 367 aa15.99■□□□□ 0.15
LRFN1-201ENST00000248668 CCNCP24863 283 aa15.99■□□□□ 0.15
LRFN1-201ENST00000248668 ABCE1P61221 599 aaKnown RBP15.99■□□□□ 0.15
LRFN1-201ENST00000248668 SLC24A5Q71RS6 500 aa15.99■□□□□ 0.15
LRFN1-201ENST00000248668 THTPAQ9BU02 230 aa15.99■□□□□ 0.15
LRFN1-201ENST00000248668 GOLGA8QA0A0J9YX86 632 aa15.99■□□□□ 0.15
LRFN1-201ENST00000248668 LOC100653049A0A140TA62 436 aa15.99■□□□□ 0.15
LRFN1-201ENST00000248668 DPPA5A6NC42 116 aa15.99■□□□□ 0.15
LRFN1-201ENST00000248668 GOLGA8OA6NCC3 632 aa15.99■□□□□ 0.15
LRFN1-201ENST00000248668 GOLGA8NF8WBI6 632 aa15.99■□□□□ 0.15
LRFN1-201ENST00000248668 KRT34O76011 436 aa15.99■□□□□ 0.15
LRFN1-201ENST00000248668 CHRNGP07510 517 aa15.99■□□□□ 0.15
LRFN1-201ENST00000248668 HAPLN1P10915 354 aaPredicted RBP15.99■□□□□ 0.15
LRFN1-201ENST00000248668 TM4SF4P48230 202 aa15.99■□□□□ 0.15
LRFN1-201ENST00000248668 BRMS1LQ5PSV4 323 aa15.99■□□□□ 0.15
LRFN1-201ENST00000248668 HAPLN3Q96S86 360 aa15.99■□□□□ 0.15
LRFN1-201ENST00000248668 NMRAL1Q9HBL8 299 aa15.99■□□□□ 0.15
LRFN1-201ENST00000248668 TLK1Q9UKI8 766 aa15.99■□□□□ 0.15
LRFN1-201ENST00000248668 CORO1CQ9ULV4 474 aaPredicted RBP15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms