RNA–Protein interactions for RNA: ENST00000243082.4

HOXC11-201, Transcript of homeobox C11, humanhuman

TSL 3 BASIC

Gene HOXC11, Length 2,039 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-201ENST00000243082 TGDSO95455 350 aa18.78■□□□□ 0.6
HOXC11-201ENST00000243082 TROVE2P10155 538 aaKnown RBP eCLIP18.78■□□□□ 0.6
HOXC11-201ENST00000243082 TACR2P21452 398 aa18.78■□□□□ 0.6
HOXC11-201ENST00000243082 ATP5C1P36542 298 aaKnown RBP18.78■□□□□ 0.6
HOXC11-201ENST00000243082 MPP3Q13368 585 aa18.78■□□□□ 0.6
HOXC11-201ENST00000243082 POU6F1Q14863 301 aa18.78■□□□□ 0.6
HOXC11-201ENST00000243082 MARC1Q5VT66 337 aa18.78■□□□□ 0.6
HOXC11-201ENST00000243082 FSTL4Q6MZW2 842 aa18.78■□□□□ 0.6
HOXC11-201ENST00000243082 KIAA1841Q6NSI8 718 aa18.78■□□□□ 0.6
HOXC11-201ENST00000243082 C16orf46Q6P387 395 aa18.78■□□□□ 0.6
HOXC11-201ENST00000243082 NUDCD3Q8IVD9 361 aa18.78■□□□□ 0.6
HOXC11-201ENST00000243082 TRIM42Q8IWZ5 723 aa18.78■□□□□ 0.6
HOXC11-201ENST00000243082 TEX26Q8N6G2 289 aa18.78■□□□□ 0.6
HOXC11-201ENST00000243082 IMP4Q96G21 291 aaKnown RBP18.78■□□□□ 0.6
HOXC11-201ENST00000243082 NT5MQ9NPB1 228 aa18.78■□□□□ 0.6
HOXC11-201ENST00000243082 IARS2Q9NSE4 1012 aaKnown RBP18.78■□□□□ 0.6
HOXC11-201ENST00000243082 DCDC2Q9UHG0 476 aa18.78■□□□□ 0.6
HOXC11-201ENST00000243082 DNMT3LQ9UJW3 386 aa18.78■□□□□ 0.6
HOXC11-201ENST00000243082 ZNF840PA6NDX5 716 aa18.77■□□□□ 0.6
HOXC11-201ENST00000243082 GOLGA8TH3BQL2 631 aa18.77■□□□□ 0.6
HOXC11-201ENST00000243082 GLRA3O75311 464 aa18.77■□□□□ 0.6
HOXC11-201ENST00000243082 ABLIM3O94929 683 aa18.77■□□□□ 0.6
HOXC11-201ENST00000243082 HMGA1P17096 107 aaKnown RBP18.77■□□□□ 0.6
HOXC11-201ENST00000243082 TYK2P29597 1187 aa18.77■□□□□ 0.6
HOXC11-201ENST00000243082 WNT3AP56704 352 aa18.77■□□□□ 0.6
HOXC11-201ENST00000243082 TNK2Q07912 1038 aa18.77■□□□□ 0.6
HOXC11-201ENST00000243082 POLD3Q15054 466 aaPredicted RBP18.77■□□□□ 0.6
HOXC11-201ENST00000243082 N4BP2L1Q5TBK1 243 aaPredicted RBP18.77■□□□□ 0.6
HOXC11-201ENST00000243082 FBXW10Q5XX13 1052 aa18.77■□□□□ 0.6
HOXC11-201ENST00000243082 POTEHQ6S545 545 aa18.77■□□□□ 0.6
HOXC11-201ENST00000243082 ZNF461Q8TAF7 563 aa18.77■□□□□ 0.6
HOXC11-201ENST00000243082 OVCA2Q8WZ82 227 aa18.77■□□□□ 0.6
HOXC11-201ENST00000243082 TOP1MTQ969P6 601 aa18.77■□□□□ 0.6
HOXC11-201ENST00000243082 E2F7Q96AV8 911 aa18.77■□□□□ 0.6
HOXC11-201ENST00000243082 ZNF689Q96CS4 500 aaPredicted RBP18.77■□□□□ 0.6
HOXC11-201ENST00000243082 PABPC5Q96DU9 382 aaKnown RBP18.77■□□□□ 0.6
HOXC11-201ENST00000243082 CDK5RAP1Q96SZ6 601 aaKnown RBP18.77■□□□□ 0.6
HOXC11-201ENST00000243082 FSD1LQ9BXM9 530 aa18.77■□□□□ 0.6
HOXC11-201ENST00000243082 MYLK2Q9H1R3 596 aa18.77■□□□□ 0.6
HOXC11-201ENST00000243082 ATXN3LQ9H3M9 355 aa18.77■□□□□ 0.6
HOXC11-201ENST00000243082 SP110Q9HB58 689 aa18.77■□□□□ 0.6
HOXC11-201ENST00000243082 SNX15Q9NRS6 342 aa18.77■□□□□ 0.6
HOXC11-201ENST00000243082 ATP11BQ9Y2G3 1177 aa18.77■□□□□ 0.6
HOXC11-201ENST00000243082 MTO1Q9Y2Z2 717 aaKnown RBP18.77■□□□□ 0.6
HOXC11-201ENST00000243082 RAMP2O60895 175 aa18.76■□□□□ 0.59
HOXC11-201ENST00000243082 GJB5O95377 273 aa18.76■□□□□ 0.59
HOXC11-201ENST00000243082 SOD2P04179 222 aa18.76■□□□□ 0.59
HOXC11-201ENST00000243082 PRKCGP05129 697 aa18.76■□□□□ 0.59
HOXC11-201ENST00000243082 ALDH3A1P30838 453 aa18.76■□□□□ 0.59
HOXC11-201ENST00000243082 CSE1LP55060 971 aaKnown RBP18.76■□□□□ 0.59
HOXC11-201ENST00000243082 MAXP61244 160 aa18.76■□□□□ 0.59
HOXC11-201ENST00000243082 NCALDP61601 193 aa18.76■□□□□ 0.59
HOXC11-201ENST00000243082 BST1Q10588 318 aa18.76■□□□□ 0.59
HOXC11-201ENST00000243082 MTA1Q13330 715 aa18.76■□□□□ 0.59
HOXC11-201ENST00000243082 SERINC3Q13530 473 aa18.76■□□□□ 0.59
HOXC11-201ENST00000243082 IHHQ14623 411 aa18.76■□□□□ 0.59
HOXC11-201ENST00000243082 CHI3L2Q15782 390 aa18.76■□□□□ 0.59
HOXC11-201ENST00000243082 C5orf22Q49AR2 442 aa18.76■□□□□ 0.59
HOXC11-201ENST00000243082 PDPK2PQ6A1A2 396 aa18.76■□□□□ 0.59
HOXC11-201ENST00000243082 KDELC2Q7Z4H8 507 aa18.76■□□□□ 0.59
HOXC11-201ENST00000243082 TMCO2Q7Z6W1 182 aaPredicted RBP18.76■□□□□ 0.59
HOXC11-201ENST00000243082 CMC1Q7Z7K0 106 aa18.76■□□□□ 0.59
HOXC11-201ENST00000243082 PDZD8Q8NEN9 1154 aa18.76■□□□□ 0.59
HOXC11-201ENST00000243082 ATXN7L3BQ96GX2 97 aa18.76■□□□□ 0.59
HOXC11-201ENST00000243082 ZNF512Q96ME7 567 aaPredicted RBP18.76■□□□□ 0.59
HOXC11-201ENST00000243082 TRIM55Q9BYV6 548 aa18.76■□□□□ 0.59
HOXC11-201ENST00000243082 KCNK13Q9HB14 408 aa18.76■□□□□ 0.59
HOXC11-201ENST00000243082 TMEM39AQ9NV64 488 aa18.76■□□□□ 0.59
HOXC11-201ENST00000243082 DCTN4Q9UJW0 460 aa18.76■□□□□ 0.59
HOXC11-201ENST00000243082 PLIN3O60664 434 aa18.76■□□□□ 0.59
HOXC11-201ENST00000243082 MMP2P08253 660 aa18.76■□□□□ 0.59
HOXC11-201ENST00000243082 OR1E1P30953 314 aa18.76■□□□□ 0.59
HOXC11-201ENST00000243082 SLC6A4P31645 630 aa18.76■□□□□ 0.59
HOXC11-201ENST00000243082 CHRNA4P43681 627 aa18.76■□□□□ 0.59
HOXC11-201ENST00000243082 MAPKAPK2P49137 400 aa18.76■□□□□ 0.59
HOXC11-201ENST00000243082 INSCQ1MX18 579 aa18.76■□□□□ 0.59
HOXC11-201ENST00000243082 PARP15Q460N3 678 aa18.76■□□□□ 0.59
HOXC11-201ENST00000243082 ATG16L1Q676U5 607 aa18.76■□□□□ 0.59
HOXC11-201ENST00000243082 PACS2Q86VP3 889 aa18.76■□□□□ 0.59
HOXC11-201ENST00000243082 RAB3IL1Q8TBN0 382 aa18.76■□□□□ 0.59
HOXC11-201ENST00000243082 ATP2A3Q93084 1043 aa18.76■□□□□ 0.59
HOXC11-201ENST00000243082 LRRC37BQ96QE4 947 aa18.76■□□□□ 0.59
HOXC11-201ENST00000243082 ECT2Q9H8V3 914 aa18.76■□□□□ 0.59
HOXC11-201ENST00000243082 ATP13A1Q9HD20 1204 aa18.76■□□□□ 0.59
HOXC11-201ENST00000243082 TCAF1Q9Y4C2 921 aa18.76■□□□□ 0.59
HOXC11-201ENST00000243082 ACSL4O60488 711 aa18.75■□□□□ 0.59
HOXC11-201ENST00000243082 DCTN3O75935 186 aa18.75■□□□□ 0.59
HOXC11-201ENST00000243082 GMPRP36959 345 aa18.75■□□□□ 0.59
HOXC11-201ENST00000243082 ACVRL1P37023 503 aa18.75■□□□□ 0.59
HOXC11-201ENST00000243082 ABCG1P45844 678 aa18.75■□□□□ 0.59
HOXC11-201ENST00000243082 ARCN1P48444 511 aaKnown RBP18.75■□□□□ 0.59
HOXC11-201ENST00000243082 SERPINB8P50452 374 aa18.75■□□□□ 0.59
HOXC11-201ENST00000243082 YBEYP58557 167 aaPredicted RBP18.75■□□□□ 0.59
HOXC11-201ENST00000243082 IRX4P78413 519 aa18.75■□□□□ 0.59
HOXC11-201ENST00000243082 TMPRSS15P98073 1019 aa18.75■□□□□ 0.59
HOXC11-201ENST00000243082 DSG1Q02413 1049 aa18.75■□□□□ 0.59
HOXC11-201ENST00000243082 IL10RBQ08334 325 aa18.75■□□□□ 0.59
HOXC11-201ENST00000243082 PCSK7Q16549 785 aa18.75■□□□□ 0.59
HOXC11-201ENST00000243082 ESRP1Q6NXG1 681 aaKnown RBP18.75■□□□□ 0.59
HOXC11-201ENST00000243082 NLRP9Q7RTR0 991 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms