RNA–Protein interactions for RNA: ENST00000204961.4

EFNB1-201, Transcript of ephrin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFNB1, Length 3,314 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB1-201ENST00000204961 TPSAB1Q15661 275 aa15.33■□□□□ 0.04
EFNB1-201ENST00000204961 RBM20Q5T481 1227 aaKnown RBP15.33■□□□□ 0.04
EFNB1-201ENST00000204961 OTUD1Q5VV17 481 aaPredicted RBP15.33■□□□□ 0.04
EFNB1-201ENST00000204961 CIR1Q86X95 450 aaPredicted RBP15.33■□□□□ 0.04
EFNB1-201ENST00000204961 MYLK4Q86YV6 388 aaPredicted RBP15.33■□□□□ 0.04
EFNB1-201ENST00000204961 ESAMQ96AP7 390 aa15.33■□□□□ 0.04
EFNB1-201ENST00000204961 CMTM5Q96DZ9 223 aa15.33■□□□□ 0.04
EFNB1-201ENST00000204961 PNPLA8Q9NP80 782 aa15.33■□□□□ 0.04
EFNB1-201ENST00000204961 DSEQ9UL01 958 aa15.33■□□□□ 0.04
EFNB1-201ENST00000204961 DTNAQ9Y4J8 743 aa15.33■□□□□ 0.04
EFNB1-201ENST00000204961 UNC80Q8N2C7 3258 aa15.33■□□□□ 0.04
EFNB1-201ENST00000204961 DNAJC25-GNG10A0A024R161 153 aa15.32■□□□□ 0.04
EFNB1-201ENST00000204961 NCF1BA6NI72 391 aaPredicted RBP15.32■□□□□ 0.04
EFNB1-201ENST00000204961 NCF1CA8MVU1 366 aaPredicted RBP15.32■□□□□ 0.04
EFNB1-201ENST00000204961 NCF1P14598 390 aaPredicted RBP15.32■□□□□ 0.04
EFNB1-201ENST00000204961 SNX16P57768 344 aa15.32■□□□□ 0.04
EFNB1-201ENST00000204961 FOLH1Q04609 750 aa15.32■□□□□ 0.04
EFNB1-201ENST00000204961 NIPAL4Q0D2K0 466 aa15.32■□□□□ 0.04
EFNB1-201ENST00000204961 LRRC23Q53EV4 343 aaPredicted RBP15.32■□□□□ 0.04
EFNB1-201ENST00000204961 C9orf131Q5VYM1 1079 aa15.32■□□□□ 0.04
EFNB1-201ENST00000204961 MIB1Q86YT6 1006 aa15.32■□□□□ 0.04
EFNB1-201ENST00000204961 MAGEC1O60732 1142 aa15.32■□□□□ 0.04
EFNB1-201ENST00000204961 FYNP06241 537 aa15.32■□□□□ 0.04
EFNB1-201ENST00000204961 VCLP18206 1134 aa15.32■□□□□ 0.04
EFNB1-201ENST00000204961 MAPK10P53779 464 aa15.32■□□□□ 0.04
EFNB1-201ENST00000204961 SEL1L3Q68CR1 1132 aa15.32■□□□□ 0.04
EFNB1-201ENST00000204961 FAM110BQ8TC76 370 aa15.32■□□□□ 0.04
EFNB1-201ENST00000204961 RBBP8Q99708 897 aa15.32■□□□□ 0.04
EFNB1-201ENST00000204961 SMOQ99835 787 aa15.32■□□□□ 0.04
EFNB1-201ENST00000204961 DUSP16Q9BY84 665 aa15.32■□□□□ 0.04
EFNB1-201ENST00000204961 KLHL4Q9C0H6 718 aa15.32■□□□□ 0.04
EFNB1-201ENST00000204961 CDH19Q9H159 772 aa15.32■□□□□ 0.04
EFNB1-201ENST00000204961 LIN28AQ9H9Z2 209 aaKnown RBP15.32■□□□□ 0.04
EFNB1-201ENST00000204961 KCTD3Q9Y597 815 aa15.32■□□□□ 0.04
EFNB1-201ENST00000204961 EPHX2P34913 555 aa15.32■□□□□ 0.04
EFNB1-201ENST00000204961 NOS2P35228 1153 aa15.32■□□□□ 0.04
EFNB1-201ENST00000204961 NR2C2P49116 596 aa15.32■□□□□ 0.04
EFNB1-201ENST00000204961 PRPSAP1Q14558 356 aa15.32■□□□□ 0.04
EFNB1-201ENST00000204961 LBRQ14739 615 aaKnown RBP15.32■□□□□ 0.04
EFNB1-201ENST00000204961 MAMDC4Q6UXC1 1216 aa15.32■□□□□ 0.04
EFNB1-201ENST00000204961 DSELQ8IZU8 1212 aa15.32■□□□□ 0.04
EFNB1-201ENST00000204961 PPTC7Q8NI37 304 aa15.32■□□□□ 0.04
EFNB1-201ENST00000204961 BHMTQ93088 406 aa15.32■□□□□ 0.04
EFNB1-201ENST00000204961 TSPYL2Q9H2G4 693 aaPredicted RBP15.32■□□□□ 0.04
EFNB1-201ENST00000204961 PRM3Q9NNZ6 103 aa15.32■□□□□ 0.04
EFNB1-201ENST00000204961 ADARB2Q9NS39 739 aaKnown RBP15.32■□□□□ 0.04
EFNB1-201ENST00000204961 ASB3Q9Y575 518 aa15.32■□□□□ 0.04
EFNB1-201ENST00000204961 ZNF646O15015 1829 aaPredicted RBP15.31■□□□□ 0.04
EFNB1-201ENST00000204961 FAM149AA5PLN7 773 aa15.31■□□□□ 0.04
EFNB1-201ENST00000204961 LRRC14BA6NHZ5 514 aa15.31■□□□□ 0.04
EFNB1-201ENST00000204961 GPC4O75487 556 aa15.31■□□□□ 0.04
EFNB1-201ENST00000204961 PGK1P00558 417 aa15.31■□□□□ 0.04
EFNB1-201ENST00000204961 PTPN9P43378 593 aa15.31■□□□□ 0.04
EFNB1-201ENST00000204961 SERPINB8P50452 374 aa15.31■□□□□ 0.04
EFNB1-201ENST00000204961 MSLNQ13421 630 aaPredicted RBP15.31■□□□□ 0.04
EFNB1-201ENST00000204961 PLA2G4EQ3MJ16 856 aa15.31■□□□□ 0.04
EFNB1-201ENST00000204961 FBXL19Q6PCT2 694 aa15.31■□□□□ 0.04
EFNB1-201ENST00000204961 CNSTQ6PJW8 725 aa15.31■□□□□ 0.04
EFNB1-201ENST00000204961 CNTD1Q8N815 330 aa15.31■□□□□ 0.04
EFNB1-201ENST00000204961 LRRC39Q96DD0 335 aa15.31■□□□□ 0.04
EFNB1-201ENST00000204961 VPS33BQ9H267 617 aa15.31■□□□□ 0.04
EFNB1-201ENST00000204961 MROH8Q9H579 483 aa15.31■□□□□ 0.04
EFNB1-201ENST00000204961 MORF4L1Q9UBU8 362 aa15.31■□□□□ 0.04
EFNB1-201ENST00000204961 NUP214P35658 2090 aaPredicted RBP15.31■□□□□ 0.04
EFNB1-201ENST00000204961 DARSP14868 501 aaKnown RBP15.31■□□□□ 0.04
EFNB1-201ENST00000204961 UGT1A6P19224 532 aa15.31■□□□□ 0.04
EFNB1-201ENST00000204961 RAP1GDS1P52306 607 aa15.31■□□□□ 0.04
EFNB1-201ENST00000204961 CXCL17Q6UXB2 119 aa15.31■□□□□ 0.04
EFNB1-201ENST00000204961 MARK2Q7KZI7 788 aaKnown RBP15.31■□□□□ 0.04
EFNB1-201ENST00000204961 ARHGAP22Q7Z5H3 698 aa15.31■□□□□ 0.04
EFNB1-201ENST00000204961 GPR142Q7Z601 462 aa15.31■□□□□ 0.04
EFNB1-201ENST00000204961 OR52K2Q8NGK3 314 aa15.31■□□□□ 0.04
EFNB1-201ENST00000204961 GRIN3AQ8TCU5 1115 aa15.31■□□□□ 0.04
EFNB1-201ENST00000204961 SH3RF2Q8TEC5 729 aa15.31■□□□□ 0.04
EFNB1-201ENST00000204961 ATP6V1E2Q96A05 226 aa15.31■□□□□ 0.04
EFNB1-201ENST00000204961 COLEC11Q9BWP8 271 aa15.31■□□□□ 0.04
EFNB1-201ENST00000204961 TRPV6Q9H1D0 765 aa15.31■□□□□ 0.04
EFNB1-201ENST00000204961 RBM22Q9NW64 420 aaKnown RBP eCLIP15.31■□□□□ 0.04
EFNB1-201ENST00000204961 G3V2L1 256 aa15.3■□□□□ 0.04
EFNB1-201ENST00000204961 PPP6CO00743 305 aa15.3■□□□□ 0.04
EFNB1-201ENST00000204961 KLF11O14901 512 aa15.3■□□□□ 0.04
EFNB1-201ENST00000204961 TBX18O95935 607 aa15.3■□□□□ 0.04
EFNB1-201ENST00000204961 KCNA5P22460 613 aa15.3■□□□□ 0.04
EFNB1-201ENST00000204961 GABRB3P28472 473 aa15.3■□□□□ 0.04
EFNB1-201ENST00000204961 ALDH1A3P47895 512 aa15.3■□□□□ 0.04
EFNB1-201ENST00000204961 TAS2R39P59534 338 aa15.3■□□□□ 0.04
EFNB1-201ENST00000204961 PDK3Q15120 406 aa15.3■□□□□ 0.04
EFNB1-201ENST00000204961 AGKQ53H12 422 aa15.3■□□□□ 0.04
EFNB1-201ENST00000204961 SMIM14Q96QK8 99 aa15.3■□□□□ 0.04
EFNB1-201ENST00000204961 HBEGFQ99075 208 aa15.3■□□□□ 0.04
EFNB1-201ENST00000204961 TRPC7Q9HCX4 862 aa15.3■□□□□ 0.04
EFNB1-201ENST00000204961 AURKCQ9UQB9 309 aa15.3■□□□□ 0.04
EFNB1-201ENST00000204961 SNX13Q9Y5W8 968 aa15.3■□□□□ 0.04
EFNB1-201ENST00000204961 ANK1P16157 1881 aa15.3■□□□□ 0.04
EFNB1-201ENST00000204961 LCTP09848 1927 aa15.3■□□□□ 0.04
EFNB1-201ENST00000204961 ZCWPW2A0A1B0GU75 182 aa15.3■□□□□ 0.04
EFNB1-201ENST00000204961 GSTA2P09210 222 aa15.3■□□□□ 0.04
EFNB1-201ENST00000204961 YWHAQP27348 245 aa15.3■□□□□ 0.04
EFNB1-201ENST00000204961 GRIA2P42262 883 aa15.3■□□□□ 0.04
EFNB1-201ENST00000204961 SCNN1BP51168 640 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms