RNA–Protein interactions for RNA: ENSMUST00000193839.5

Pcdha1-202, Transcript of Protocadherin alpha 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Pcdha1, Length 4,925 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha1-202ENSMUST00000193839 Prdx5P99029 210 aa14.03□□□□□ -0.16
Pcdha1-202ENSMUST00000193839 Ppp1r14bQ62084 147 aa14.03□□□□□ -0.16
Pcdha1-202ENSMUST00000193839 Nqo1Q64669 274 aa14.03□□□□□ -0.16
Pcdha1-202ENSMUST00000193839 Abcg2Q7TMS5 657 aa14.03□□□□□ -0.16
Pcdha1-202ENSMUST00000193839 Arhgap28Q8BN58 729 aa14.03□□□□□ -0.16
Pcdha1-202ENSMUST00000193839 Wdr47Q8CGF6 920 aa14.03□□□□□ -0.16
Pcdha1-202ENSMUST00000193839 Haus3Q8QZX2 570 aa14.03□□□□□ -0.16
Pcdha1-202ENSMUST00000193839 Tmem68Q9D850 329 aa14.03□□□□□ -0.16
Pcdha1-202ENSMUST00000193839 Gm28168A0A087WNP1 180 aa14.03□□□□□ -0.16
Pcdha1-202ENSMUST00000193839 Olfr600E9PUN7 314 aa14.03□□□□□ -0.16
Pcdha1-202ENSMUST00000193839 4930502E18RikQ14BQ3 236 aa14.03□□□□□ -0.16
Pcdha1-202ENSMUST00000193839 Q5EBG8 199 aa14.03□□□□□ -0.16
Pcdha1-202ENSMUST00000193839 Traf3Q60803 567 aa14.03□□□□□ -0.16
Pcdha1-202ENSMUST00000193839 HadhaQ8BMS1 763 aaKnown RBP14.03□□□□□ -0.16
Pcdha1-202ENSMUST00000193839 AenQ9CZI9 336 aaKnown RBP14.03□□□□□ -0.16
Pcdha1-202ENSMUST00000193839 Mzb1Q9D8I1 188 aa14.03□□□□□ -0.16
Pcdha1-202ENSMUST00000193839 Myh3P13541 1940 aa14.03□□□□□ -0.16
Pcdha1-202ENSMUST00000193839 Smok3cA0A087WSF2 504 aa14.02□□□□□ -0.16
Pcdha1-202ENSMUST00000193839 Rpl9-ps6A0A140T8T4 192 aa14.02□□□□□ -0.16
Pcdha1-202ENSMUST00000193839 Erich1E9PY43 332 aa14.02□□□□□ -0.16
Pcdha1-202ENSMUST00000193839 Slc1a6O35544 561 aa14.02□□□□□ -0.16
Pcdha1-202ENSMUST00000193839 Rpl9P51410 192 aaKnown RBP14.02□□□□□ -0.16
Pcdha1-202ENSMUST00000193839 Shox2P70390 331 aa14.02□□□□□ -0.16
Pcdha1-202ENSMUST00000193839 ArvcfP98203 962 aa14.02□□□□□ -0.16
Pcdha1-202ENSMUST00000193839 Krt2Q3TTY5 707 aa14.02□□□□□ -0.16
Pcdha1-202ENSMUST00000193839 Dnajc1Q61712 552 aaKnown RBP14.02□□□□□ -0.16
Pcdha1-202ENSMUST00000193839 Fnip1Q68FD7 1165 aa14.02□□□□□ -0.16
Pcdha1-202ENSMUST00000193839 Nup93Q8BJ71 819 aaKnown RBP14.02□□□□□ -0.16
Pcdha1-202ENSMUST00000193839 SowahaQ8BLS7 548 aa14.02□□□□□ -0.16
Pcdha1-202ENSMUST00000193839 Fbxo33Q8VE08 562 aa14.02□□□□□ -0.16
Pcdha1-202ENSMUST00000193839 Rsl24d1Q99L28 163 aa14.02□□□□□ -0.16
Pcdha1-202ENSMUST00000193839 Cdyl2Q9D5D8 503 aa14.02□□□□□ -0.16
Pcdha1-202ENSMUST00000193839 Klrc2Q9WTJ9 238 aa14.02□□□□□ -0.16
Pcdha1-202ENSMUST00000193839 Umodl1Q5DID3 1319 aa14.02□□□□□ -0.16
Pcdha1-202ENSMUST00000193839 Gm5152L7N200 190 aa14.02□□□□□ -0.16
Pcdha1-202ENSMUST00000193839 Rpl21O09167 160 aaKnown RBP14.02□□□□□ -0.16
Pcdha1-202ENSMUST00000193839 Prim2P33610 505 aa14.02□□□□□ -0.16
Pcdha1-202ENSMUST00000193839 Sash1P59808 1230 aa14.02□□□□□ -0.16
Pcdha1-202ENSMUST00000193839 Q32P12 615 aa14.02□□□□□ -0.16
Pcdha1-202ENSMUST00000193839 Faf2Q3TDN2 445 aa14.02□□□□□ -0.16
Pcdha1-202ENSMUST00000193839 Shcbp1lQ3TTP0 639 aa14.02□□□□□ -0.16
Pcdha1-202ENSMUST00000193839 Kctd8Q50H33 476 aa14.02□□□□□ -0.16
Pcdha1-202ENSMUST00000193839 Magee1Q6PCZ4 918 aaKnown RBP14.02□□□□□ -0.16
Pcdha1-202ENSMUST00000193839 Samd4bQ80XS6 687 aa14.02□□□□□ -0.16
Pcdha1-202ENSMUST00000193839 Pcid2Q8BFV2 399 aaKnown RBP14.02□□□□□ -0.16
Pcdha1-202ENSMUST00000193839 Nat14Q8BVG8 206 aa14.02□□□□□ -0.16
Pcdha1-202ENSMUST00000193839 Txndc12Q9CQU0 170 aa14.02□□□□□ -0.16
Pcdha1-202ENSMUST00000193839 Ssu72Q9CY97 194 aaKnown RBP14.02□□□□□ -0.16
Pcdha1-202ENSMUST00000193839 Pcna-ps2A0A140T8V5 261 aa14.02□□□□□ -0.17
Pcdha1-202ENSMUST00000193839 S100zB9EJL3 99 aa14.02□□□□□ -0.17
Pcdha1-202ENSMUST00000193839 Kctd18E0CZ26 429 aa14.02□□□□□ -0.17
Pcdha1-202ENSMUST00000193839 Top6blJ3QMY9 579 aa14.02□□□□□ -0.17
Pcdha1-202ENSMUST00000193839 Csn1s1P19228 313 aa14.02□□□□□ -0.17
Pcdha1-202ENSMUST00000193839 HdcP23738 662 aa14.02□□□□□ -0.17
Pcdha1-202ENSMUST00000193839 Smpdl3bP58242 456 aa14.02□□□□□ -0.17
Pcdha1-202ENSMUST00000193839 Mtnr1aQ61184 353 aa14.02□□□□□ -0.17
Pcdha1-202ENSMUST00000193839 Stard3Q61542 446 aa14.02□□□□□ -0.17
Pcdha1-202ENSMUST00000193839 Dusp11Q6NXK5 321 aaKnown RBP14.02□□□□□ -0.17
Pcdha1-202ENSMUST00000193839 Slc25a24Q8BMD8 475 aa14.02□□□□□ -0.17
Pcdha1-202ENSMUST00000193839 Depdc7Q91WS7 511 aa14.02□□□□□ -0.17
Pcdha1-202ENSMUST00000193839 Mrps2Q924T2 291 aaKnown RBP14.02□□□□□ -0.17
Pcdha1-202ENSMUST00000193839 NgrnQ99KS2 293 aaKnown RBP14.02□□□□□ -0.17
Pcdha1-202ENSMUST00000193839 Lyrm1Q9CQB7 122 aa14.02□□□□□ -0.17
Pcdha1-202ENSMUST00000193839 Efcab9Q9DAM2 216 aa14.02□□□□□ -0.17
Pcdha1-202ENSMUST00000193839 Col2a1P28481 1487 aa14.02□□□□□ -0.17
Pcdha1-202ENSMUST00000193839 Gm10477F6SW83 55 aa14.02□□□□□ -0.17
Pcdha1-202ENSMUST00000193839 Gm3164L7N2B9 238 aa14.02□□□□□ -0.17
Pcdha1-202ENSMUST00000193839 Gm3264L7N2C5 238 aa14.02□□□□□ -0.17
Pcdha1-202ENSMUST00000193839 Fam91a1Q3UVG3 837 aa14.02□□□□□ -0.17
Pcdha1-202ENSMUST00000193839 Gm11487Q5RIS0 354 aa14.02□□□□□ -0.17
Pcdha1-202ENSMUST00000193839 SvoplQ6PDF3 494 aa14.02□□□□□ -0.17
Pcdha1-202ENSMUST00000193839 Nrde2Q80XC6 1172 aa14.02□□□□□ -0.17
Pcdha1-202ENSMUST00000193839 Dnm1lQ8K1M6 742 aa14.02□□□□□ -0.17
Pcdha1-202ENSMUST00000193839 Setd7Q8VHL1 366 aa14.02□□□□□ -0.17
Pcdha1-202ENSMUST00000193839 Crtc3Q91X84 619 aa14.02□□□□□ -0.17
Pcdha1-202ENSMUST00000193839 Reep3Q99KK1 254 aa14.02□□□□□ -0.17
Pcdha1-202ENSMUST00000193839 Tmem115Q9WUH1 350 aa14.02□□□□□ -0.17
Pcdha1-202ENSMUST00000193839 Gm3252E9PUT9 216 aa14.01□□□□□ -0.17
Pcdha1-202ENSMUST00000193839 Gm3468E9QAJ8 216 aa14.01□□□□□ -0.17
Pcdha1-202ENSMUST00000193839 Lamp2P17047 415 aa14.01□□□□□ -0.17
Pcdha1-202ENSMUST00000193839 InaP46660 501 aa14.01□□□□□ -0.17
Pcdha1-202ENSMUST00000193839 CratP47934 626 aa14.01□□□□□ -0.17
Pcdha1-202ENSMUST00000193839 PrkczQ02956 592 aa14.01□□□□□ -0.17
Pcdha1-202ENSMUST00000193839 Znf354cQ571J5 560 aa14.01□□□□□ -0.17
Pcdha1-202ENSMUST00000193839 Znf569Q80W31 679 aa14.01□□□□□ -0.17
Pcdha1-202ENSMUST00000193839 Fam163bQ8BUM6 167 aa14.01□□□□□ -0.17
Pcdha1-202ENSMUST00000193839 Pnpla8Q8K1N1 776 aa14.01□□□□□ -0.17
Pcdha1-202ENSMUST00000193839 Mapk8Q91Y86 384 aa14.01□□□□□ -0.17
Pcdha1-202ENSMUST00000193839 Prpf19Q99KP6 504 aaKnown RBP14.01□□□□□ -0.17
Pcdha1-202ENSMUST00000193839 Cstf3Q99LI7 717 aaKnown RBP14.01□□□□□ -0.17
Pcdha1-202ENSMUST00000193839 Ppil6Q9D6D8 278 aa14.01□□□□□ -0.17
Pcdha1-202ENSMUST00000193839 Oxct2bQ9ESL0 520 aa14.01□□□□□ -0.17
Pcdha1-202ENSMUST00000193839 Oxct2aQ9JJN4 520 aa14.01□□□□□ -0.17
Pcdha1-202ENSMUST00000193839 Fam71aB7XG49 585 aa14.01□□□□□ -0.17
Pcdha1-202ENSMUST00000193839 Impa1O55023 277 aa14.01□□□□□ -0.17
Pcdha1-202ENSMUST00000193839 AfpP02772 605 aa14.01□□□□□ -0.17
Pcdha1-202ENSMUST00000193839 Gjb1P28230 283 aa14.01□□□□□ -0.17
Pcdha1-202ENSMUST00000193839 Ak8Q32M07 479 aa14.01□□□□□ -0.17
Pcdha1-202ENSMUST00000193839 Eif1adQ3THJ3 170 aaKnown RBP14.01□□□□□ -0.17
Pcdha1-202ENSMUST00000193839 Foxo6Q70KY4 559 aa14.01□□□□□ -0.17
Retrieved 100 of 22,080 RNA–protein pairs in 35.5 ms