RNA–Protein interactions for RNA: ENSMUST00000088349.2

Col9a1-202, Transcript of Collagen alpha-1(IX) chain, mousemouse

TSL 1 (best) BASIC

Gene Col9a1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1-202ENSMUST00000088349 Nsl1Q8K305 281 aa11.75□□□□□ -0.53
Col9a1-202ENSMUST00000088349 Fbxo33Q8VE08 562 aa11.75□□□□□ -0.53
Col9a1-202ENSMUST00000088349 Atad5Q4QY64 1826 aa11.75□□□□□ -0.53
Col9a1-202ENSMUST00000088349 Tspoap1Q7TNF8 1846 aa11.75□□□□□ -0.53
Col9a1-202ENSMUST00000088349 Wdr49A0A0N4SUK7 710 aa11.74□□□□□ -0.53
Col9a1-202ENSMUST00000088349 Slfn9B1ARD6 910 aa11.74□□□□□ -0.53
Col9a1-202ENSMUST00000088349 Acp4D3YTS9 425 aa11.74□□□□□ -0.53
Col9a1-202ENSMUST00000088349 Kcnt2D3Z649 1135 aa11.74□□□□□ -0.53
Col9a1-202ENSMUST00000088349 Vmn2r70K7N702 854 aa11.74□□□□□ -0.53
Col9a1-202ENSMUST00000088349 Il12aP43431 215 aa11.74□□□□□ -0.53
Col9a1-202ENSMUST00000088349 Gpr65Q61038 337 aa11.74□□□□□ -0.53
Col9a1-202ENSMUST00000088349 Itih1Q61702 907 aa11.74□□□□□ -0.53
Col9a1-202ENSMUST00000088349 Efr3bQ6ZQ18 817 aa11.74□□□□□ -0.53
Col9a1-202ENSMUST00000088349 Snx8Q8CFD4 459 aa11.74□□□□□ -0.53
Col9a1-202ENSMUST00000088349 Zbtb8bQ8CII0 484 aa11.74□□□□□ -0.53
Col9a1-202ENSMUST00000088349 Olfr1325Q8VF43 315 aa11.74□□□□□ -0.53
Col9a1-202ENSMUST00000088349 Arl2Q9D0J4 184 aa11.74□□□□□ -0.53
Col9a1-202ENSMUST00000088349 Agpat3Q9D517 376 aa11.74□□□□□ -0.53
Col9a1-202ENSMUST00000088349 Fam162aQ9D6U8 155 aa11.74□□□□□ -0.53
Col9a1-202ENSMUST00000088349 Ifrd2Q9D8U0 441 aa11.74□□□□□ -0.53
Col9a1-202ENSMUST00000088349 Tbc1d21Q9D9D3 336 aa11.74□□□□□ -0.53
Col9a1-202ENSMUST00000088349 Chrnb2Q9ERK7 501 aa11.74□□□□□ -0.53
Col9a1-202ENSMUST00000088349 Kdelc1Q9JHP7 502 aa11.74□□□□□ -0.53
Col9a1-202ENSMUST00000088349 VapbQ9QY76 243 aaKnown RBP11.74□□□□□ -0.53
Col9a1-202ENSMUST00000088349 Znf683I7HJS4 458 aa11.74□□□□□ -0.53
Col9a1-202ENSMUST00000088349 NoctO35710 429 aa11.74□□□□□ -0.53
Col9a1-202ENSMUST00000088349 Top3aO70157 1003 aa11.74□□□□□ -0.53
Col9a1-202ENSMUST00000088349 Mmp3P28862 477 aa11.74□□□□□ -0.53
Col9a1-202ENSMUST00000088349 Olfr464Q5SW48 313 aa11.74□□□□□ -0.53
Col9a1-202ENSMUST00000088349 Slc5a10Q5SWY8 596 aa11.74□□□□□ -0.53
Col9a1-202ENSMUST00000088349 EfsQ64355 560 aa11.74□□□□□ -0.53
Col9a1-202ENSMUST00000088349 Gxylt2Q810K9 444 aa11.74□□□□□ -0.53
Col9a1-202ENSMUST00000088349 Gtf3c4Q8BMQ2 817 aaKnown RBP11.74□□□□□ -0.53
Col9a1-202ENSMUST00000088349 Slc18a2Q8BRU6 517 aa11.74□□□□□ -0.53
Col9a1-202ENSMUST00000088349 Rap2cQ8BU31 183 aa11.74□□□□□ -0.53
Col9a1-202ENSMUST00000088349 Anapc2Q8BZQ7 837 aa11.74□□□□□ -0.53
Col9a1-202ENSMUST00000088349 Tbc1d22aQ8R5A6 516 aa11.74□□□□□ -0.53
Col9a1-202ENSMUST00000088349 Zdhhc7Q91WU6 308 aa11.74□□□□□ -0.53
Col9a1-202ENSMUST00000088349 Nipsnap3bQ9CQE1 247 aa11.74□□□□□ -0.53
Col9a1-202ENSMUST00000088349 Atg7Q9D906 698 aa11.74□□□□□ -0.53
Col9a1-202ENSMUST00000088349 Eif4e3Q9DBB5 207 aa11.74□□□□□ -0.53
Col9a1-202ENSMUST00000088349 Akr1e2Q9DCT1 301 aa11.74□□□□□ -0.53
Col9a1-202ENSMUST00000088349 Copg1Q9QZE5 874 aa11.74□□□□□ -0.53
Col9a1-202ENSMUST00000088349 Vmn2r14E9Q759 848 aa11.73□□□□□ -0.53
Col9a1-202ENSMUST00000088349 Pdzd7E9Q9W7 1021 aa11.73□□□□□ -0.53
Col9a1-202ENSMUST00000088349 Gm6408J3QNG1 320 aa11.73□□□□□ -0.53
Col9a1-202ENSMUST00000088349 Gm3383J3QQ59 259 aa11.73□□□□□ -0.53
Col9a1-202ENSMUST00000088349 Gm3402K7N5P2 326 aa11.73□□□□□ -0.53
Col9a1-202ENSMUST00000088349 Gm3164L7N2B9 238 aa11.73□□□□□ -0.53
Col9a1-202ENSMUST00000088349 Gm3239L7N2D9 227 aa11.73□□□□□ -0.53
Col9a1-202ENSMUST00000088349 Sypl2O89104 264 aa11.73□□□□□ -0.53
Col9a1-202ENSMUST00000088349 Lamp2P17047 415 aa11.73□□□□□ -0.53
Col9a1-202ENSMUST00000088349 Slc6a13P31649 602 aa11.73□□□□□ -0.53
Col9a1-202ENSMUST00000088349 Acot8P58137 320 aa11.73□□□□□ -0.53
Col9a1-202ENSMUST00000088349 Trafd1Q3UDK1 580 aa11.73□□□□□ -0.53
Col9a1-202ENSMUST00000088349 Sarm1Q6PDS3 724 aa11.73□□□□□ -0.53
Col9a1-202ENSMUST00000088349 Rad9bQ6WBX7 403 aa11.73□□□□□ -0.53
Col9a1-202ENSMUST00000088349 Kcng4Q80XM3 506 aa11.73□□□□□ -0.53
Col9a1-202ENSMUST00000088349 Il31raQ8K5B1 716 aa11.73□□□□□ -0.53
Col9a1-202ENSMUST00000088349 Pcolce2Q8R4W6 414 aa11.73□□□□□ -0.53
Col9a1-202ENSMUST00000088349 Rem2Q8VEL9 341 aa11.73□□□□□ -0.53
Col9a1-202ENSMUST00000088349 Sec16bQ91XT4 1051 aa11.73□□□□□ -0.53
Col9a1-202ENSMUST00000088349 Acot13Q9CQR4 140 aa11.73□□□□□ -0.53
Col9a1-202ENSMUST00000088349 Tnni1Q9WUZ5 187 aa11.73□□□□□ -0.53
Col9a1-202ENSMUST00000088349 Vmn2r96E9PZU5 664 aa11.73□□□□□ -0.53
Col9a1-202ENSMUST00000088349 Pcsk6F6XJP7 959 aa11.73□□□□□ -0.53
Col9a1-202ENSMUST00000088349 Fam167bP17257 162 aa11.73□□□□□ -0.53
Col9a1-202ENSMUST00000088349 Smyd5Q3TYX3 416 aa11.73□□□□□ -0.53
Col9a1-202ENSMUST00000088349 Podnl1Q6P3Y9 559 aa11.73□□□□□ -0.53
Col9a1-202ENSMUST00000088349 Tas2r115Q7M719 310 aa11.73□□□□□ -0.53
Col9a1-202ENSMUST00000088349 Mtmr10Q7TPM9 771 aa11.73□□□□□ -0.53
Col9a1-202ENSMUST00000088349 Nup93Q8BJ71 819 aaKnown RBP11.73□□□□□ -0.53
Col9a1-202ENSMUST00000088349 DseQ8BLI4 958 aa11.73□□□□□ -0.53
Col9a1-202ENSMUST00000088349 Psd4Q8BLR5 1005 aa11.73□□□□□ -0.53
Col9a1-202ENSMUST00000088349 Sik2Q8CFH6 931 aa11.73□□□□□ -0.53
Col9a1-202ENSMUST00000088349 Oit3Q8R4V5 546 aa11.73□□□□□ -0.53
Col9a1-202ENSMUST00000088349 Acsf2Q8VCW8 615 aa11.73□□□□□ -0.53
Col9a1-202ENSMUST00000088349 Gprc5bQ923Z0 410 aa11.73□□□□□ -0.53
Col9a1-202ENSMUST00000088349 Gmpr2Q99L27 348 aa11.73□□□□□ -0.53
Col9a1-202ENSMUST00000088349 Ddx59Q9DBN9 619 aa11.73□□□□□ -0.53
Col9a1-202ENSMUST00000088349 CrotQ9DC50 612 aa11.73□□□□□ -0.53
Col9a1-202ENSMUST00000088349 EtfbQ9DCW4 255 aaKnown RBP11.73□□□□□ -0.53
Col9a1-202ENSMUST00000088349 LactbQ9EP89 551 aa11.73□□□□□ -0.53
Col9a1-202ENSMUST00000088349 Dbn1Q9QXS6 706 aa11.73□□□□□ -0.53
Col9a1-202ENSMUST00000088349 Trpc7Q9WVC5 862 aa11.73□□□□□ -0.53
Col9a1-202ENSMUST00000088349 Cib1Q9Z0F4 191 aa11.73□□□□□ -0.53
Col9a1-202ENSMUST00000088349 Gm28168A0A087WNP1 180 aa11.73□□□□□ -0.53
Col9a1-202ENSMUST00000088349 Btbd35f15A0A087WR44 498 aa11.73□□□□□ -0.53
Col9a1-202ENSMUST00000088349 Btbd35f12A0A0A0MQP3 498 aa11.73□□□□□ -0.53
Col9a1-202ENSMUST00000088349 Gucy2dA0A0U1RPR8 1117 aa11.73□□□□□ -0.53
Col9a1-202ENSMUST00000088349 Btbd35f9A2BFZ7 498 aa11.73□□□□□ -0.53
Col9a1-202ENSMUST00000088349 Btbd35f7A2BHG6 498 aa11.73□□□□□ -0.53
Col9a1-202ENSMUST00000088349 Btbd35f19A2CG71 498 aa11.73□□□□□ -0.53
Col9a1-202ENSMUST00000088349 Btbd35f10A2CG92 498 aa11.73□□□□□ -0.53
Col9a1-202ENSMUST00000088349 Btbd35f3A2CGC2 496 aa11.73□□□□□ -0.53
Col9a1-202ENSMUST00000088349 Btbd35f13B8JKF6 498 aa11.73□□□□□ -0.53
Col9a1-202ENSMUST00000088349 Slc4a9E9PUP3 929 aa11.73□□□□□ -0.53
Col9a1-202ENSMUST00000088349 Btbd35f2J3QMS5 498 aa11.73□□□□□ -0.53
Col9a1-202ENSMUST00000088349 Btbd35f25J3QMV9 498 aa11.73□□□□□ -0.53
Col9a1-202ENSMUST00000088349 Btbd35f6J3QMW9 498 aa11.73□□□□□ -0.53
Retrieved 100 of 22,080 RNA–protein pairs in 31.4 ms