RNA–Protein interactions for RNA: ENSMUST00000085546.12

Hmgb1-201, Transcript of High mobility group protein B1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hmgb1, Length 2,838 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-201ENSMUST00000085546 Vmn2r61L7N2B8 865 aa9.88□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Gm4340L7N2C4 268 aa9.88□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 AlyrefO08583 255 aaKnown RBP9.88□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Alas2P08680 587 aa9.88□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Nos2P29477 1144 aa9.88□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 GsrP47791 500 aa9.88□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 ArntP53762 791 aa9.88□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 NadkP58058 439 aa9.88□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Psme2P97372 239 aa9.88□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Fam171bQ14CH0 825 aa9.88□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Aak1Q3UHJ0 959 aa9.88□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Ifnl2Q4VK74 193 aa9.88□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Papss1Q60967 624 aa9.88□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 HiraQ61666 1015 aa9.88□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Letm2Q7TNU7 480 aa9.88□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 SybuQ8BHS8 665 aa9.88□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Lin9Q8C735 542 aa9.88□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Dnajc22Q8CHS2 339 aa9.88□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Serpinb10Q8K1K6 397 aa9.88□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Btbd6Q8K2J9 488 aa9.88□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Mthfd1Q922D8 935 aa9.88□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Lrrc59Q922Q8 307 aaKnown RBP9.88□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Micu3Q9CTY5 523 aa9.88□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Clca1Q9D7Z6 913 aa9.88□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Phkg2Q9DB30 406 aa9.88□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Ampd2Q9DBT5 798 aa9.88□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Usp29Q9ES63 869 aa9.88□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 CtsmQ9JL96 333 aa9.88□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Slc7a9Q9QXA6 487 aa9.88□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 TesminQ9WTJ6 475 aa9.88□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Aqp5Q9WTY4 265 aa9.88□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Rbck1Q9WUB0 508 aa9.88□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Homer1Q9Z2Y3 366 aa9.88□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Col4a1P02463 1669 aa9.87□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Tceal7A3KGA4 98 aa9.87□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Vmn2r24D3YUI0 854 aa9.87□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Nlrp12E9Q5R7 1054 aa9.87□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Atf6F6VAN0 656 aa9.87□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 ClockO08785 855 aa9.87□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 HgdO09173 445 aa9.87□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Psmb9P28076 219 aa9.87□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 GnpatP98192 678 aa9.87□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Pla2g4dQ50L43 825 aa9.87□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Coq8aQ60936 645 aa9.87□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 CybbQ61093 570 aa9.87□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Yod1Q8CB27 343 aa9.87□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Aqp12Q8CHJ2 290 aa9.87□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Olfr215Q8VF82 310 aa9.87□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Socs7Q8VHQ2 579 aa9.87□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Pcdha2Q91Y17 948 aa9.87□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Fbxl20Q9CZV8 436 aa9.87□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 PpihQ9D868 188 aa9.87□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Mbd3l1Q9D9H3 186 aa9.87□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 CrotQ9DC50 612 aa9.87□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 EtfbQ9DCW4 255 aaKnown RBP9.87□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Nap1l5Q9JJF0 156 aa9.87□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Pmm2Q9Z2M7 242 aa9.87□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Zfp984A2A7A2 547 aa9.87□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Cypt3B1AY64 174 aa9.87□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Zfp808B8JJZ4 753 aa9.87□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Grip2G3XA20 1042 aa9.87□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Gm3424L7N298 263 aa9.87□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Gm8246M0QWX9 263 aa9.87□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Anxa3O35639 323 aa9.87□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Grik2P39087 908 aa9.87□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Cd9P40240 226 aa9.87□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 CcnfP51944 777 aa9.87□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 LipeP54310 759 aa9.87□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Npy2rP97295 381 aa9.87□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Eya3P97480 510 aa9.87□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 CblbQ3TTA7 982 aa9.87□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Gdpd5Q640M6 607 aa9.87□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Znf366Q6NS86 746 aa9.87□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Skiv2lQ6NZR5 1244 aa9.87□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Abhd10Q6PE15 297 aa9.87□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 HpseQ6YGZ1 535 aa9.87□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Clca2Q8BG22 942 aa9.87□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Tmem117Q8BH18 514 aa9.87□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 ChdhQ8BJ64 596 aa9.87□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Atp6v1hQ8BVE3 483 aa9.87□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Atxn7l2Q8C8K6 696 aa9.87□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Slc49a3Q8CE47 516 aa9.87□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Chchd6Q91VN4 273 aa9.87□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Kctd10Q922M3 315 aa9.87□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Rfc4Q99J62 364 aa9.87□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Tnk1Q99ML2 666 aa9.87□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Thap12Q9CUX1 758 aa9.87□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Cdyl2Q9D5D8 503 aa9.87□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Tor1bQ9ER41 336 aa9.87□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Gtf2iQ9ESZ8 998 aaKnown RBP9.87□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Ybx3Q9JKB3 361 aaKnown RBP9.87□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Slc7a8Q9QXW9 531 aa9.87□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 CtsfQ9R013 462 aa9.87□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Myo16Q5DU14 1919 aa9.86□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Gm43796A0A0J9YV32 372 aa9.86□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Ccdc8D3YZV8 685 aa9.86□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Cyp4f40G3UW81 524 aa9.86□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 E230025N22RikG5E8S3 482 aa9.86□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 C1qbpO35658 278 aa9.86□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Arl6O88848 186 aa9.86□□□□□ -0.83
Retrieved 100 of 22,080 RNA–protein pairs in 29.8 ms