RNA–Protein interactions for RNA: ENSMUST00000033158.5

Ubfd1-201, Transcript of Ubiquitin domain-containing protein UBFD1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubfd1, Length 4,849 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1-201ENSMUST00000033158 Mapkap1Q8BKH7 522 aa16.81■□□□□ 0.28
Ubfd1-201ENSMUST00000033158 Tmco6Q8BQX5 494 aa16.81■□□□□ 0.28
Ubfd1-201ENSMUST00000033158 Btbd9Q8C726 612 aa16.81■□□□□ 0.28
Ubfd1-201ENSMUST00000033158 Acsm2Q8K0L3 575 aa16.81■□□□□ 0.28
Ubfd1-201ENSMUST00000033158 Glis1Q8K1M4 789 aa16.81■□□□□ 0.28
Ubfd1-201ENSMUST00000033158 Top3bQ9Z321 862 aaKnown RBP16.81■□□□□ 0.28
Ubfd1-201ENSMUST00000033158 Gm3147A0A0J9YU88 481 aa16.8■□□□□ 0.28
Ubfd1-201ENSMUST00000033158 Gm10424A0A0J9YVD0 481 aa16.8■□□□□ 0.28
Ubfd1-201ENSMUST00000033158 Slfn3A0A1L1STQ7 640 aa16.8■□□□□ 0.28
Ubfd1-201ENSMUST00000033158 Gm281D3Z1Y0 860 aa16.8■□□□□ 0.28
Ubfd1-201ENSMUST00000033158 Gm8257E9Q8R3 264 aa16.8■□□□□ 0.28
Ubfd1-201ENSMUST00000033158 Gm7971J3QMM8 481 aa16.8■□□□□ 0.28
Ubfd1-201ENSMUST00000033158 Acvrl1Q61288 502 aa16.8■□□□□ 0.28
Ubfd1-201ENSMUST00000033158 Slc18a2Q8BRU6 517 aa16.8■□□□□ 0.28
Ubfd1-201ENSMUST00000033158 Q8CCC3 530 aa16.8■□□□□ 0.28
Ubfd1-201ENSMUST00000033158 Tnfaip8Q921Z5 198 aa16.8■□□□□ 0.28
Ubfd1-201ENSMUST00000033158 Pou5f2Q9DAC9 329 aa16.8■□□□□ 0.28
Ubfd1-201ENSMUST00000033158 Ripk3Q9QZL0 486 aa16.8■□□□□ 0.28
Ubfd1-201ENSMUST00000033158 Arrdc4A0A0B4J1F4 415 aa16.8■□□□□ 0.28
Ubfd1-201ENSMUST00000033158 0610012G03RikA0A0J9YTR2 95 aa16.8■□□□□ 0.28
Ubfd1-201ENSMUST00000033158 Gm2956E9PVJ0 216 aa16.8■□□□□ 0.28
Ubfd1-201ENSMUST00000033158 Zc3h7aE9PWW6 970 aaKnown RBP16.8■□□□□ 0.28
Ubfd1-201ENSMUST00000033158 Gm8108K7N734 216 aa16.8■□□□□ 0.28
Ubfd1-201ENSMUST00000033158 Gm3739L7N296 216 aa16.8■□□□□ 0.28
Ubfd1-201ENSMUST00000033158 Gm3164L7N2B9 238 aa16.8■□□□□ 0.28
Ubfd1-201ENSMUST00000033158 Gm3488M0QW81 238 aa16.8■□□□□ 0.28
Ubfd1-201ENSMUST00000033158 AgxtO35423 414 aa16.8■□□□□ 0.28
Ubfd1-201ENSMUST00000033158 Ints6Q6PCM2 883 aa16.8■□□□□ 0.28
Ubfd1-201ENSMUST00000033158 Dupd1Q8BK84 215 aa16.8■□□□□ 0.28
Ubfd1-201ENSMUST00000033158 Kctd15Q8K0E1 283 aa16.8■□□□□ 0.28
Ubfd1-201ENSMUST00000033158 Mtrf1Q8K126 446 aa16.8■□□□□ 0.28
Ubfd1-201ENSMUST00000033158 Swi5Q8K3D3 89 aa16.8■□□□□ 0.28
Ubfd1-201ENSMUST00000033158 Olfr1499Q8VG65 314 aa16.8■□□□□ 0.28
Ubfd1-201ENSMUST00000033158 Rasgef1cQ9D300 466 aa16.8■□□□□ 0.28
Ubfd1-201ENSMUST00000033158 Tbc1d16A2ABG4 766 aa16.8■□□□□ 0.28
Ubfd1-201ENSMUST00000033158 Rtn2O70622 471 aa16.8■□□□□ 0.28
Ubfd1-201ENSMUST00000033158 Pik3r6Q3U6Q4 756 aa16.8■□□□□ 0.28
Ubfd1-201ENSMUST00000033158 Ca4Q64444 305 aa16.8■□□□□ 0.28
Ubfd1-201ENSMUST00000033158 Pcdh19Q80TF3 1145 aa16.8■□□□□ 0.28
Ubfd1-201ENSMUST00000033158 Sgsm3Q8VCZ6 750 aa16.8■□□□□ 0.28
Ubfd1-201ENSMUST00000033158 TraipQ8VIG6 470 aa16.8■□□□□ 0.28
Ubfd1-201ENSMUST00000033158 Sytl2Q99N50 950 aa16.8■□□□□ 0.28
Ubfd1-201ENSMUST00000033158 Lyrm1Q9CQB7 122 aa16.8■□□□□ 0.28
Ubfd1-201ENSMUST00000033158 Gm7535F7CXE4 302 aa16.8■□□□□ 0.28
Ubfd1-201ENSMUST00000033158 Zyg11bQ3UFS0 744 aa16.8■□□□□ 0.28
Ubfd1-201ENSMUST00000033158 Gpr65Q61038 337 aa16.8■□□□□ 0.28
Ubfd1-201ENSMUST00000033158 Cyp3a11Q64459 504 aa16.8■□□□□ 0.28
Ubfd1-201ENSMUST00000033158 Lima1Q9ERG0 753 aaKnown RBP16.8■□□□□ 0.28
Ubfd1-201ENSMUST00000033158 Gria4Q9Z2W8 902 aa16.8■□□□□ 0.28
Ubfd1-201ENSMUST00000033158 Gm12794L7MTS5 483 aa16.79■□□□□ 0.28
Ubfd1-201ENSMUST00000033158 PargO88622 969 aaKnown RBP16.79■□□□□ 0.28
Ubfd1-201ENSMUST00000033158 Il2rbP16297 539 aa16.79■□□□□ 0.28
Ubfd1-201ENSMUST00000033158 Srd5a1Q68FF9 255 aa16.79■□□□□ 0.28
Ubfd1-201ENSMUST00000033158 Ssx9Q6XAS3 170 aa16.79■□□□□ 0.28
Ubfd1-201ENSMUST00000033158 Tecpr1Q80VP0 1166 aa16.79■□□□□ 0.28
Ubfd1-201ENSMUST00000033158 Epb41l5Q8BGS1 731 aa16.79■□□□□ 0.28
Ubfd1-201ENSMUST00000033158 Sh3glb2Q8R3V5 400 aa16.79■□□□□ 0.28
Ubfd1-201ENSMUST00000033158 Gtf2a1lQ8R4I4 468 aa16.79■□□□□ 0.28
Ubfd1-201ENSMUST00000033158 Reep3Q99KK1 254 aa16.79■□□□□ 0.28
Ubfd1-201ENSMUST00000033158 Tex28B1AYN9 409 aa16.79■□□□□ 0.28
Ubfd1-201ENSMUST00000033158 Gm4450E9Q007 373 aa16.79■□□□□ 0.28
Ubfd1-201ENSMUST00000033158 Olfr292F8VQ84 308 aa16.79■□□□□ 0.28
Ubfd1-201ENSMUST00000033158 Coq7P97478 217 aa16.79■□□□□ 0.28
Ubfd1-201ENSMUST00000033158 Mageb5Q14AN0 366 aa16.79■□□□□ 0.28
Ubfd1-201ENSMUST00000033158 Fam169aQ5XG69 665 aa16.79■□□□□ 0.28
Ubfd1-201ENSMUST00000033158 Hsd3b4Q61767 373 aa16.79■□□□□ 0.28
Ubfd1-201ENSMUST00000033158 Olfr169Q7TS53 313 aa16.79■□□□□ 0.28
Ubfd1-201ENSMUST00000033158 Gabra5Q8BHJ7 463 aa16.79■□□□□ 0.28
Ubfd1-201ENSMUST00000033158 Catsper4Q8BVN3 442 aa16.79■□□□□ 0.28
Ubfd1-201ENSMUST00000033158 Hdac7Q8C2B3 938 aa16.79■□□□□ 0.28
Ubfd1-201ENSMUST00000033158 Bhlhe22Q8C6A8 355 aa16.79■□□□□ 0.28
Ubfd1-201ENSMUST00000033158 Ndfip2Q91ZP6 311 aa16.79■□□□□ 0.28
Ubfd1-201ENSMUST00000033158 Gsdmdc1Q9D8T2 487 aa16.79■□□□□ 0.28
Ubfd1-201ENSMUST00000033158 Zbed6D2EAC2 980 aa16.79■□□□□ 0.28
Ubfd1-201ENSMUST00000033158 Tmigd3G3X8R9 209 aa16.79■□□□□ 0.28
Ubfd1-201ENSMUST00000033158 Pitpnm1O35954 1243 aa16.79■□□□□ 0.28
Ubfd1-201ENSMUST00000033158 Reps1O54916 795 aa16.79■□□□□ 0.28
Ubfd1-201ENSMUST00000033158 Lhx5P61375 402 aa16.79■□□□□ 0.28
Ubfd1-201ENSMUST00000033158 Arf4P61750 180 aa16.79■□□□□ 0.28
Ubfd1-201ENSMUST00000033158 Klrb1Q0ZUP1 214 aa16.79■□□□□ 0.28
Ubfd1-201ENSMUST00000033158 Slc17a7Q3TXX4 560 aa16.79■□□□□ 0.28
Ubfd1-201ENSMUST00000033158 Dennd1bQ3U1T9 766 aa16.79■□□□□ 0.28
Ubfd1-201ENSMUST00000033158 Pcnx4Q3UVY5 1174 aa16.79■□□□□ 0.28
Ubfd1-201ENSMUST00000033158 Slc39a14Q75N73 489 aa16.79■□□□□ 0.28
Ubfd1-201ENSMUST00000033158 AW551984Q8BGF0 804 aa16.79■□□□□ 0.28
Ubfd1-201ENSMUST00000033158 Fbxo30Q8BJL1 746 aa16.79■□□□□ 0.28
Ubfd1-201ENSMUST00000033158 Rab36Q8CAM5 267 aa16.79■□□□□ 0.28
Ubfd1-201ENSMUST00000033158 Wnt9aQ8R5M2 365 aa16.79■□□□□ 0.28
Ubfd1-201ENSMUST00000033158 Fam20bQ8VCS3 409 aa16.79■□□□□ 0.28
Ubfd1-201ENSMUST00000033158 Olfr330Q8VGD9 315 aa16.79■□□□□ 0.28
Ubfd1-201ENSMUST00000033158 TfQ921I1 697 aa16.79■□□□□ 0.28
Ubfd1-201ENSMUST00000033158 5530400C23RikQ9D3I0 173 aa16.79■□□□□ 0.28
Ubfd1-201ENSMUST00000033158 Cyp2b13A6H6J2 491 aa16.79■□□□□ 0.28
Ubfd1-201ENSMUST00000033158 Nkx1-1G3UXB3 402 aa16.79■□□□□ 0.28
Ubfd1-201ENSMUST00000033158 4930544D05RikJ3QK56 214 aa16.79■□□□□ 0.28
Ubfd1-201ENSMUST00000033158 BpgmP15327 259 aa16.79■□□□□ 0.28
Ubfd1-201ENSMUST00000033158 NogP97466 232 aa16.79■□□□□ 0.28
Ubfd1-201ENSMUST00000033158 Mks1Q5SW45 561 aa16.79■□□□□ 0.28
Ubfd1-201ENSMUST00000033158 Klhl23Q6GQU2 558 aa16.79■□□□□ 0.28
Ubfd1-201ENSMUST00000033158 Ubash3bQ8BGG7 638 aa16.79■□□□□ 0.28
Retrieved 100 of 22,080 RNA–protein pairs in 31.3 ms