RNA–Protein interactions for RNA: ENST00000641939.1

PHGDH-231, Transcript of phosphoglycerate dehydrogenase, human

Gene PHGDH, Length 540 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PHGDH-231	ENST00000641939	TRIM7	Q9C029	511 aa		15.38	■□□□□ 0.05
PHGDH-231	ENST00000641939	MIR1-1HG	Q9H1L0	117 aa		15.38	■□□□□ 0.05
PHGDH-231	ENST00000641939	NEUROG2	Q9H2A3	272 aa		15.38	■□□□□ 0.05
PHGDH-231	ENST00000641939	MRPL47	Q9HD33	250 aa	Known RBP	15.38	■□□□□ 0.05
PHGDH-231	ENST00000641939	NDFIP2	Q9NV92	336 aa		15.38	■□□□□ 0.05
PHGDH-231	ENST00000641939	EIF2B4	Q9UI10	523 aa	Known RBP	15.38	■□□□□ 0.05
PHGDH-231	ENST00000641939	DNAI1	Q9UI46	699 aa		15.38	■□□□□ 0.05
PHGDH-231	ENST00000641939	FZD4	Q9ULV1	537 aa		15.38	■□□□□ 0.05
PHGDH-231	ENST00000641939	TP53BP1	Q12888	1972 aa	Predicted RBP	15.37	■□□□□ 0.05
PHGDH-231	ENST00000641939		A0A1B0GTW7	788 aa		15.37	■□□□□ 0.05
PHGDH-231	ENST00000641939	ARHGAP33	O14559	1287 aa		15.37	■□□□□ 0.05
PHGDH-231	ENST00000641939	TM4SF5	O14894	197 aa		15.37	■□□□□ 0.05
PHGDH-231	ENST00000641939	MCF2L	O15068	1137 aa		15.37	■□□□□ 0.05
PHGDH-231	ENST00000641939	SMAD6	O43541	496 aa	Known RBP	15.37	■□□□□ 0.05
PHGDH-231	ENST00000641939	CREB3	O43889	395 aa		15.37	■□□□□ 0.05
PHGDH-231	ENST00000641939	BNIP3L	O60238	219 aa		15.37	■□□□□ 0.05
PHGDH-231	ENST00000641939	ZMPSTE24	O75844	475 aa		15.37	■□□□□ 0.05
PHGDH-231	ENST00000641939	RNF8	O76064	485 aa		15.37	■□□□□ 0.05
PHGDH-231	ENST00000641939	SYP	P08247	313 aa		15.37	■□□□□ 0.05
PHGDH-231	ENST00000641939	EPHB2	P29323	1055 aa		15.37	■□□□□ 0.05
PHGDH-231	ENST00000641939	SLC20A2	Q08357	652 aa		15.37	■□□□□ 0.05
PHGDH-231	ENST00000641939	ZNF252P-AS1	Q0IIN9	211 aa		15.37	■□□□□ 0.05
PHGDH-231	ENST00000641939	FAM46C	Q5VWP2	391 aa		15.37	■□□□□ 0.05
PHGDH-231	ENST00000641939	DAB2IP	Q5VWQ8	1189 aa		15.37	■□□□□ 0.05
PHGDH-231	ENST00000641939	SPECC1L	Q69YQ0	1117 aa		15.37	■□□□□ 0.05
PHGDH-231	ENST00000641939	ZCCHC9	Q8N567	271 aa	Known RBP	15.37	■□□□□ 0.05
PHGDH-231	ENST00000641939	AADAT	Q8N5Z0	425 aa		15.37	■□□□□ 0.05
PHGDH-231	ENST00000641939	RNF214	Q8ND24	703 aa		15.37	■□□□□ 0.05
PHGDH-231	ENST00000641939	SNX19	Q92543	992 aa		15.37	■□□□□ 0.05
PHGDH-231	ENST00000641939	CCDC114	Q96M63	670 aa		15.37	■□□□□ 0.05
PHGDH-231	ENST00000641939	ACE2	Q9BYF1	805 aa	Predicted RBP	15.37	■□□□□ 0.05
PHGDH-231	ENST00000641939	MAGEH1	Q9H213	219 aa		15.37	■□□□□ 0.05
PHGDH-231	ENST00000641939	FSCN3	Q9NQT6	498 aa		15.37	■□□□□ 0.05
PHGDH-231	ENST00000641939	MYO1A	Q9UBC5	1043 aa		15.37	■□□□□ 0.05
PHGDH-231	ENST00000641939	SARDH	Q9UL12	918 aa		15.37	■□□□□ 0.05
PHGDH-231	ENST00000641939	PPM1H	Q9ULR3	514 aa		15.37	■□□□□ 0.05
PHGDH-231	ENST00000641939	ZBTB32	Q9Y2Y4	487 aa	Predicted RBP	15.37	■□□□□ 0.05
PHGDH-231	ENST00000641939	FARP1	Q9Y4F1	1045 aa	Predicted RBP	15.37	■□□□□ 0.05
PHGDH-231	ENST00000641939	PLXNA2	O75051	1894 aa		15.37	■□□□□ 0.05
PHGDH-231	ENST00000641939	FAM47DP	A6NHR8	397 aa		15.36	■□□□□ 0.05
PHGDH-231	ENST00000641939	LRRC72	A6NJI9	287 aa		15.36	■□□□□ 0.05
PHGDH-231	ENST00000641939	C1QTNF3-AMACR	E9PGA6	284 aa		15.36	■□□□□ 0.05
PHGDH-231	ENST00000641939	BCAT2	O15382	392 aa	Predicted RBP	15.36	■□□□□ 0.05
PHGDH-231	ENST00000641939	RAMP2	O60895	175 aa		15.36	■□□□□ 0.05
PHGDH-231	ENST00000641939	FSBP	O95073	299 aa		15.36	■□□□□ 0.05
PHGDH-231	ENST00000641939	DRD3	P35462	400 aa		15.36	■□□□□ 0.05
PHGDH-231	ENST00000641939	ACVRL1	P37023	503 aa		15.36	■□□□□ 0.05
PHGDH-231	ENST00000641939	MAPK8	P45983	427 aa		15.36	■□□□□ 0.05
PHGDH-231	ENST00000641939	SERPINH1	P50454	418 aa	Known RBP	15.36	■□□□□ 0.05
PHGDH-231	ENST00000641939	ATXN3	P54252	364 aa	Predicted RBP	15.36	■□□□□ 0.05
PHGDH-231	ENST00000641939	GALC	P54803	685 aa		15.36	■□□□□ 0.05
PHGDH-231	ENST00000641939	ARF5	P84085	180 aa		15.36	■□□□□ 0.05
PHGDH-231	ENST00000641939	SEMA3B	Q13214	749 aa		15.36	■□□□□ 0.05
PHGDH-231	ENST00000641939	TRIM14	Q14142	442 aa		15.36	■□□□□ 0.05
PHGDH-231	ENST00000641939	POLD3	Q15054	466 aa	Predicted RBP	15.36	■□□□□ 0.05
PHGDH-231	ENST00000641939	C22orf39	Q6P5X5	142 aa		15.36	■□□□□ 0.05
PHGDH-231	ENST00000641939	ARFGAP1	Q8N6T3	406 aa		15.36	■□□□□ 0.05
PHGDH-231	ENST00000641939	RTL3	Q8N8U3	475 aa	Known RBP	15.36	■□□□□ 0.05
PHGDH-231	ENST00000641939	OR2A12	Q8NGT7	310 aa		15.36	■□□□□ 0.05
PHGDH-231	ENST00000641939	OR2T34	Q8NGX1	318 aa		15.36	■□□□□ 0.05
PHGDH-231	ENST00000641939	PIP4K2C	Q8TBX8	421 aa		15.36	■□□□□ 0.05
PHGDH-231	ENST00000641939	ARHGEF2	Q92974	986 aa	Known RBP	15.36	■□□□□ 0.05
PHGDH-231	ENST00000641939	BIRC7	Q96CA5	298 aa		15.36	■□□□□ 0.05
PHGDH-231	ENST00000641939	CEP44	Q9C0F1	390 aa		15.36	■□□□□ 0.05
PHGDH-231	ENST00000641939	ARHGAP20	Q9P2F6	1191 aa		15.36	■□□□□ 0.05
PHGDH-231	ENST00000641939		A0A087X0T9	212 aa		15.35	■□□□□ 0.05
PHGDH-231	ENST00000641939	CXorf51A	A0A1B0GTR3	108 aa		15.35	■□□□□ 0.05
PHGDH-231	ENST00000641939	EIF3CL	B5ME19	914 aa	Known RBP	15.35	■□□□□ 0.05
PHGDH-231	ENST00000641939	FGF10	O15520	208 aa	Predicted RBP	15.35	■□□□□ 0.05
PHGDH-231	ENST00000641939	PRPSAP2	O60256	369 aa		15.35	■□□□□ 0.05
PHGDH-231	ENST00000641939	FAM228B	P0C875	321 aa		15.35	■□□□□ 0.05
PHGDH-231	ENST00000641939	MIP	P30301	263 aa		15.35	■□□□□ 0.05
PHGDH-231	ENST00000641939	HNRNPH3	P31942	346 aa	Known RBP	15.35	■□□□□ 0.05
PHGDH-231	ENST00000641939	CHRNA3	P32297	505 aa		15.35	■□□□□ 0.05
PHGDH-231	ENST00000641939	HTR7	P34969	479 aa		15.35	■□□□□ 0.05
PHGDH-231	ENST00000641939	RECQL	P46063	649 aa	Predicted RBP	15.35	■□□□□ 0.05
PHGDH-231	ENST00000641939	METAP1	P53582	386 aa		15.35	■□□□□ 0.05
PHGDH-231	ENST00000641939	ADPRH	P54922	357 aa		15.35	■□□□□ 0.05
PHGDH-231	ENST00000641939	GEMIN4	P57678	1058 aa	Known RBP	15.35	■□□□□ 0.05
PHGDH-231	ENST00000641939	UAP1L1	Q3KQV9	507 aa		15.35	■□□□□ 0.05
PHGDH-231	ENST00000641939	PPM1J	Q5JR12	505 aa		15.35	■□□□□ 0.05
PHGDH-231	ENST00000641939	ERMARD	Q5T6L9	678 aa		15.35	■□□□□ 0.05
PHGDH-231	ENST00000641939	KIAA0895L	Q68EN5	471 aa		15.35	■□□□□ 0.05
PHGDH-231	ENST00000641939	NCEH1	Q6PIU2	408 aa		15.35	■□□□□ 0.05
PHGDH-231	ENST00000641939	VSTM4	Q8IW00	320 aa		15.35	■□□□□ 0.05
PHGDH-231	ENST00000641939	PCDH20	Q8N6Y1	951 aa	Known RBP	15.35	■□□□□ 0.05
PHGDH-231	ENST00000641939	OR14C36	Q8NHC7	312 aa		15.35	■□□□□ 0.05
PHGDH-231	ENST00000641939	C1orf216	Q8TAB5	229 aa		15.35	■□□□□ 0.05
PHGDH-231	ENST00000641939	EIF3C	Q99613	913 aa	Known RBP	15.35	■□□□□ 0.05
PHGDH-231	ENST00000641939	NCAPG	Q9BPX3	1015 aa		15.35	■□□□□ 0.05
PHGDH-231	ENST00000641939	GTPBP2	Q9BX10	602 aa	Known RBP	15.35	■□□□□ 0.05
PHGDH-231	ENST00000641939	THAP2	Q9H0W7	228 aa		15.35	■□□□□ 0.05
PHGDH-231	ENST00000641939	CATSPERB	Q9H7T0	1116 aa		15.35	■□□□□ 0.05
PHGDH-231	ENST00000641939	GPATCH2L	Q9NWQ4	482 aa		15.35	■□□□□ 0.05
PHGDH-231	ENST00000641939	PCSK1N	Q9UHG2	260 aa		15.35	■□□□□ 0.05
PHGDH-231	ENST00000641939	HPCAL4	Q9UM19	191 aa		15.35	■□□□□ 0.05
PHGDH-231	ENST00000641939	AP4E1	Q9UPM8	1137 aa		15.35	■□□□□ 0.05
PHGDH-231	ENST00000641939	TMEM131	Q92545	1883 aa		15.35	■□□□□ 0.05
PHGDH-231	ENST00000641939	WASH4P	A8MWX3	477 aa		15.34	■□□□□ 0.05
PHGDH-231	ENST00000641939	SLC7A4	O43246	635 aa		15.34	■□□□□ 0.05

Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms