RNA–Protein interactions for RNA: ENST00000641597.1

PHGDH-223, Transcript of phosphoglycerate dehydrogenase, humanhuman

APPRIS P1 BASIC

Gene PHGDH, Length 2,585 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-223ENST00000641597 TIGD5Q53EQ6 642 aa17.13■□□□□ 0.33
PHGDH-223ENST00000641597 CFAP157Q5JU67 520 aa17.13■□□□□ 0.33
PHGDH-223ENST00000641597 THEMIS2Q5TEJ8 643 aa17.13■□□□□ 0.33
PHGDH-223ENST00000641597 RPS27LQ71UM5 84 aaKnown RBP17.13■□□□□ 0.33
PHGDH-223ENST00000641597 IPMKQ8NFU5 416 aa17.13■□□□□ 0.33
PHGDH-223ENST00000641597 RTP3Q9BQQ7 232 aa17.13■□□□□ 0.33
PHGDH-223ENST00000641597 NUF2Q9BZD4 464 aa17.13■□□□□ 0.33
PHGDH-223ENST00000641597 C1orf21Q9H246 121 aa17.13■□□□□ 0.33
PHGDH-223ENST00000641597 S100A14Q9HCY8 104 aa17.13■□□□□ 0.33
PHGDH-223ENST00000641597 DNAJC28Q9NX36 388 aa17.13■□□□□ 0.33
PHGDH-223ENST00000641597 AIM2O14862 343 aa17.12■□□□□ 0.33
PHGDH-223ENST00000641597 PEX2P28328 305 aa17.12■□□□□ 0.33
PHGDH-223ENST00000641597 LRPAP1P30533 357 aa17.12■□□□□ 0.33
PHGDH-223ENST00000641597 CHRNA4P43681 627 aa17.12■□□□□ 0.33
PHGDH-223ENST00000641597 CRYBB1P53674 252 aaPredicted RBP17.12■□□□□ 0.33
PHGDH-223ENST00000641597 NAGLUP54802 743 aa17.12■□□□□ 0.33
PHGDH-223ENST00000641597 AP2B1P63010 937 aa17.12■□□□□ 0.33
PHGDH-223ENST00000641597 SFT2D3Q587I9 215 aa17.12■□□□□ 0.33
PHGDH-223ENST00000641597 CMPK2Q5EBM0 449 aa17.12■□□□□ 0.33
PHGDH-223ENST00000641597 C6orf163Q5TEZ5 329 aa17.12■□□□□ 0.33
PHGDH-223ENST00000641597 IRGCQ6NXR0 463 aa17.12■□□□□ 0.33
PHGDH-223ENST00000641597 EPGNQ6UW88 154 aa17.12■□□□□ 0.33
PHGDH-223ENST00000641597 CEP97Q8IW35 865 aa17.12■□□□□ 0.33
PHGDH-223ENST00000641597 MYLPFQ96A32 169 aa17.12■□□□□ 0.33
PHGDH-223ENST00000641597 ANGPTL2Q9UKU9 493 aa17.12■□□□□ 0.33
PHGDH-223ENST00000641597 POMPQ9Y244 141 aa17.12■□□□□ 0.33
PHGDH-223ENST00000641597 MYLKQ15746 1914 aa17.12■□□□□ 0.33
PHGDH-223ENST00000641597 KLHL2O95198 593 aa17.12■□□□□ 0.33
PHGDH-223ENST00000641597 POMCP01189 267 aa17.12■□□□□ 0.33
PHGDH-223ENST00000641597 AHSGP02765 367 aa17.12■□□□□ 0.33
PHGDH-223ENST00000641597 COX4I1P13073 169 aa17.12■□□□□ 0.33
PHGDH-223ENST00000641597 GALNT2Q10471 571 aa17.12■□□□□ 0.33
PHGDH-223ENST00000641597 TBL3Q12788 808 aaKnown RBP17.12■□□□□ 0.33
PHGDH-223ENST00000641597 KLF10Q13118 480 aa17.12■□□□□ 0.33
PHGDH-223ENST00000641597 INSCQ1MX18 579 aa17.12■□□□□ 0.33
PHGDH-223ENST00000641597 ARL13AQ5H913 290 aaPredicted RBP17.12■□□□□ 0.33
PHGDH-223ENST00000641597 ZC3H15Q8WU90 426 aaKnown RBP17.12■□□□□ 0.33
PHGDH-223ENST00000641597 GATA6Q92908 595 aa17.12■□□□□ 0.33
PHGDH-223ENST00000641597 TEKT5Q96M29 485 aa17.12■□□□□ 0.33
PHGDH-223ENST00000641597 TUBGCP5Q96RT8 1024 aa17.12■□□□□ 0.33
PHGDH-223ENST00000641597 ECSITQ9BQ95 431 aa17.12■□□□□ 0.33
PHGDH-223ENST00000641597 ACE2Q9BYF1 805 aaPredicted RBP17.12■□□□□ 0.33
PHGDH-223ENST00000641597 SFMBT1Q9UHJ3 866 aa17.12■□□□□ 0.33
PHGDH-223ENST00000641597 ST3GAL5Q9UNP4 418 aa17.12■□□□□ 0.33
PHGDH-223ENST00000641597 MTF2Q9Y483 593 aaPredicted RBP17.12■□□□□ 0.33
PHGDH-223ENST00000641597 SF3B1O75533 1304 aaKnown RBP eCLIP17.11■□□□□ 0.333e-6■■■■■ 100.2
PHGDH-223ENST00000641597 RNASEH1O60930 286 aaKnown RBP17.11■□□□□ 0.33
PHGDH-223ENST00000641597 VAPBO95292 243 aa17.11■□□□□ 0.33
PHGDH-223ENST00000641597 ALOX15P16050 662 aaPredicted RBP17.11■□□□□ 0.33
PHGDH-223ENST00000641597 AXLP30530 894 aa17.11■□□□□ 0.33
PHGDH-223ENST00000641597 GRIA4P48058 902 aa17.11■□□□□ 0.33
PHGDH-223ENST00000641597 ASPHQ12797 758 aa17.11■□□□□ 0.33
PHGDH-223ENST00000641597 ESRP1Q6NXG1 681 aaKnown RBP17.11■□□□□ 0.33
PHGDH-223ENST00000641597 LRRTM3Q86VH5 581 aa17.11■□□□□ 0.33
PHGDH-223ENST00000641597 ZDHHC2Q9UIJ5 367 aa17.11■□□□□ 0.33
PHGDH-223ENST00000641597 NEMP2A6NFY4 417 aa17.11■□□□□ 0.33
PHGDH-223ENST00000641597 ARL5CA6NH57 179 aa17.11■□□□□ 0.33
PHGDH-223ENST00000641597 TRIM13O60858 407 aa17.11■□□□□ 0.33
PHGDH-223ENST00000641597 ITGB1P05556 798 aa17.11■□□□□ 0.33
PHGDH-223ENST00000641597 SLC35E2BP0CK96 405 aa17.11■□□□□ 0.33
PHGDH-223ENST00000641597 PSEN1P49768 467 aa17.11■□□□□ 0.33
PHGDH-223ENST00000641597 USP10Q14694 798 aaKnown RBP17.11■□□□□ 0.33
PHGDH-223ENST00000641597 TBCCQ15814 346 aa17.11■□□□□ 0.33
PHGDH-223ENST00000641597 PGM2L1Q6PCE3 622 aa17.11■□□□□ 0.33
PHGDH-223ENST00000641597 ZC3HC1Q86WB0 502 aaKnown RBP17.11■□□□□ 0.33
PHGDH-223ENST00000641597 DPF3Q92784 378 aa17.11■□□□□ 0.33
PHGDH-223ENST00000641597 NTAN1Q96AB6 310 aa17.11■□□□□ 0.33
PHGDH-223ENST00000641597 HDAC11Q96DB2 347 aa17.11■□□□□ 0.33
PHGDH-223ENST00000641597 SCYL1Q96KG9 808 aa17.11■□□□□ 0.33
PHGDH-223ENST00000641597 MCMBPQ9BTE3 642 aa17.11■□□□□ 0.33
PHGDH-223ENST00000641597 C1QTNF1Q9BXJ1 281 aa17.11■□□□□ 0.33
PHGDH-223ENST00000641597 SUDS3Q9H7L9 328 aaPredicted RBP17.11■□□□□ 0.33
PHGDH-223ENST00000641597 SSX2IPQ9Y2D8 614 aa17.11■□□□□ 0.33
PHGDH-223ENST00000641597 TTC24A2A3L6 582 aaPredicted RBP17.1■□□□□ 0.33
PHGDH-223ENST00000641597 C17orf102A2RUQ5 167 aa17.1■□□□□ 0.33
PHGDH-223ENST00000641597 STX16-NPEPL1H3BU86 382 aa17.1■□□□□ 0.33
PHGDH-223ENST00000641597 HAS3O00219 553 aa17.1■□□□□ 0.33
PHGDH-223ENST00000641597 PMPCBO75439 489 aa17.1■□□□□ 0.33
PHGDH-223ENST00000641597 PIGNO95427 931 aa17.1■□□□□ 0.33
PHGDH-223ENST00000641597 DSG1Q02413 1049 aa17.1■□□□□ 0.33
PHGDH-223ENST00000641597 SCAPQ12770 1279 aa17.1■□□□□ 0.33
PHGDH-223ENST00000641597 DLG1Q12959 904 aa17.1■□□□□ 0.33
PHGDH-223ENST00000641597 CCDC153Q494R4 210 aa17.1■□□□□ 0.33
PHGDH-223ENST00000641597 RAB41Q5JT25 222 aa17.1■□□□□ 0.33
PHGDH-223ENST00000641597 CENPLQ8N0S6 344 aaPredicted RBP17.1■□□□□ 0.33
PHGDH-223ENST00000641597 ISL2Q96A47 359 aa17.1■□□□□ 0.33
PHGDH-223ENST00000641597 CNGB3Q9NQW8 809 aa17.1■□□□□ 0.33
PHGDH-223ENST00000641597 FAM105AQ9NUU6 356 aa17.1■□□□□ 0.33
PHGDH-223ENST00000641597 OXSMQ9NWU1 459 aa17.1■□□□□ 0.33
PHGDH-223ENST00000641597 FIS1Q9Y3D6 152 aa17.1■□□□□ 0.33
PHGDH-223ENST00000641597 CDY2AQ9Y6F7 541 aa17.1■□□□□ 0.33
PHGDH-223ENST00000641597 CCDC189A1A4V9 331 aa17.1■□□□□ 0.33
PHGDH-223ENST00000641597 PGK1P00558 417 aa17.1■□□□□ 0.33
PHGDH-223ENST00000641597 ARNTP27540 789 aa17.1■□□□□ 0.33
PHGDH-223ENST00000641597 AQP4P55087 323 aa17.1■□□□□ 0.33
PHGDH-223ENST00000641597 NAB1Q13506 487 aa17.1■□□□□ 0.33
PHGDH-223ENST00000641597 PDCD2Q16342 344 aaPredicted RBP17.1■□□□□ 0.33
PHGDH-223ENST00000641597 LSM12Q3MHD2 195 aaKnown RBP17.1■□□□□ 0.33
PHGDH-223ENST00000641597 SNX32Q86XE0 403 aa17.1■□□□□ 0.33
PHGDH-223ENST00000641597 SNX31Q8N9S9 440 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms