RNA–Protein interactions for RNA: ENST00000638141.1

CAPN3-221, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 2,358 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-221ENST00000638141 LLGL2Q6P1M3 1020 aa12.21□□□□□ -0.46
CAPN3-221ENST00000638141 SIX5Q8N196 739 aa12.21□□□□□ -0.46
CAPN3-221ENST00000638141 MFSD4AQ8N468 514 aa12.21□□□□□ -0.46
CAPN3-221ENST00000638141 SIMC1Q8NDZ2 872 aa12.21□□□□□ -0.46
CAPN3-221ENST00000638141 PIK3C3Q8NEB9 887 aa12.21□□□□□ -0.46
CAPN3-221ENST00000638141 P2RX7Q99572 595 aaKnown RBP12.21□□□□□ -0.46
CAPN3-221ENST00000638141 SLC39A3Q9BRY0 314 aa12.21□□□□□ -0.46
CAPN3-221ENST00000638141 CLPBQ9H078 707 aa12.21□□□□□ -0.46
CAPN3-221ENST00000638141 TBC1D22BQ9NU19 505 aa12.21□□□□□ -0.46
CAPN3-221ENST00000638141 ZC3H7BQ9UGR2 993 aaKnown RBP12.21□□□□□ -0.46
CAPN3-221ENST00000638141 SNX13Q9Y5W8 968 aa12.21□□□□□ -0.46
CAPN3-221ENST00000638141 RAD54BQ9Y620 910 aa12.21□□□□□ -0.46
CAPN3-221ENST00000638141 MN1Q10571 1320 aaPredicted RBP12.21□□□□□ -0.46
CAPN3-221ENST00000638141 TCRBV5S1A1TA0A578 114 aa12.2□□□□□ -0.46
CAPN3-221ENST00000638141 APOC4-APOC2K7ER74 178 aa12.2□□□□□ -0.46
CAPN3-221ENST00000638141 APOC2P02655 101 aa12.2□□□□□ -0.46
CAPN3-221ENST00000638141 FYNP06241 537 aa12.2□□□□□ -0.46
CAPN3-221ENST00000638141 GNAO1P09471 354 aa12.2□□□□□ -0.46
CAPN3-221ENST00000638141 MSL3P1P0C860 447 aa12.2□□□□□ -0.46
CAPN3-221ENST00000638141 MMP8P22894 467 aa12.2□□□□□ -0.46
CAPN3-221ENST00000638141 SERPINB5P36952 375 aa12.2□□□□□ -0.46
CAPN3-221ENST00000638141 QARSP47897 775 aaKnown RBP12.2□□□□□ -0.46
CAPN3-221ENST00000638141 BASP1P80723 227 aaKnown RBP12.2□□□□□ -0.46
CAPN3-221ENST00000638141 FSTL1Q12841 308 aa12.2□□□□□ -0.46
CAPN3-221ENST00000638141 CBX2Q14781 532 aaPredicted RBP12.2□□□□□ -0.46
CAPN3-221ENST00000638141 CDONQ4KMG0 1287 aa12.2□□□□□ -0.46
CAPN3-221ENST00000638141 SLC9B1Q4ZJI4 515 aa12.2□□□□□ -0.46
CAPN3-221ENST00000638141 CCNYL2Q5T2Q4 361 aa12.2□□□□□ -0.46
CAPN3-221ENST00000638141 PRR5LQ6MZQ0 368 aa12.2□□□□□ -0.46
CAPN3-221ENST00000638141 TATDN1Q6P1N9 297 aa12.2□□□□□ -0.46
CAPN3-221ENST00000638141 PADI6Q6TGC4 694 aa12.2□□□□□ -0.46
CAPN3-221ENST00000638141 B3GNT9Q6UX72 402 aa12.2□□□□□ -0.46
CAPN3-221ENST00000638141 BTLAQ7Z6A9 289 aa12.2□□□□□ -0.46
CAPN3-221ENST00000638141 SLC51BQ86UW2 128 aa12.2□□□□□ -0.46
CAPN3-221ENST00000638141 CMASQ8NFW8 434 aaPredicted RBP12.2□□□□□ -0.46
CAPN3-221ENST00000638141 SNX19Q92543 992 aa12.2□□□□□ -0.46
CAPN3-221ENST00000638141 CFAP36Q96G28 342 aa12.2□□□□□ -0.46
CAPN3-221ENST00000638141 ACO2Q99798 780 aaKnown RBP12.2□□□□□ -0.46
CAPN3-221ENST00000638141 TRIT1Q9H3H1 467 aaKnown RBP12.2□□□□□ -0.46
CAPN3-221ENST00000638141 EHMT1Q9H9B1 1298 aa12.2□□□□□ -0.46
CAPN3-221ENST00000638141 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.2□□□□□ -0.46
CAPN3-221ENST00000638141 MRGBPQ9NV56 204 aa12.2□□□□□ -0.46
CAPN3-221ENST00000638141 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.2□□□□□ -0.46
CAPN3-221ENST00000638141 AGTPBP1Q9UPW5 1226 aa12.2□□□□□ -0.46
CAPN3-221ENST00000638141 TRIM24O15164 1050 aa12.2□□□□□ -0.46
CAPN3-221ENST00000638141 CSPG5O95196 566 aa12.2□□□□□ -0.46
CAPN3-221ENST00000638141 IL18RAPO95256 599 aa12.2□□□□□ -0.46
CAPN3-221ENST00000638141 ENO3P13929 434 aaPredicted RBP12.2□□□□□ -0.46
CAPN3-221ENST00000638141 IFNA8P32881 189 aa12.2□□□□□ -0.46
CAPN3-221ENST00000638141 GRIK1P39086 918 aa12.2□□□□□ -0.46
CAPN3-221ENST00000638141 ECT2LQ008S8 904 aa12.2□□□□□ -0.46
CAPN3-221ENST00000638141 TNK2Q07912 1038 aa12.2□□□□□ -0.46
CAPN3-221ENST00000638141 NFE2Q16621 373 aaPredicted RBP12.2□□□□□ -0.46
CAPN3-221ENST00000638141 PGS1Q32NB8 556 aa12.2□□□□□ -0.46
CAPN3-221ENST00000638141 WDR44Q5JSH3 913 aa12.2□□□□□ -0.46
CAPN3-221ENST00000638141 C15orf39Q6ZRI6 1047 aa12.2□□□□□ -0.46
CAPN3-221ENST00000638141 USP51Q70EK9 711 aa12.2□□□□□ -0.46
CAPN3-221ENST00000638141 DSG4Q86SJ6 1040 aa12.2□□□□□ -0.46
CAPN3-221ENST00000638141 FBXO11Q86XK2 927 aa12.2□□□□□ -0.46
CAPN3-221ENST00000638141 MCUQ8NE86 351 aa12.2□□□□□ -0.46
CAPN3-221ENST00000638141 TRIM63Q969Q1 353 aa12.2□□□□□ -0.46
CAPN3-221ENST00000638141 CCDC17Q96LX7 622 aa12.2□□□□□ -0.46
CAPN3-221ENST00000638141 MTG1Q9BT17 334 aaPredicted RBP12.2□□□□□ -0.46
CAPN3-221ENST00000638141 C9orf16Q9BUW7 83 aa12.2□□□□□ -0.46
CAPN3-221ENST00000638141 SNX25Q9H3E2 840 aa12.2□□□□□ -0.46
CAPN3-221ENST00000638141 PKD2L2Q9NZM6 624 aa12.2□□□□□ -0.46
CAPN3-221ENST00000638141 PAK5Q9P286 719 aa12.2□□□□□ -0.46
CAPN3-221ENST00000638141 BCS1LQ9Y276 419 aa12.2□□□□□ -0.46
CAPN3-221ENST00000638141 SLC27A5Q9Y2P5 690 aa12.2□□□□□ -0.46
CAPN3-221ENST00000638141 A8MU76 341 aa12.19□□□□□ -0.46
CAPN3-221ENST00000638141 GAS7O60861 476 aa12.19□□□□□ -0.46
CAPN3-221ENST00000638141 BMP1P13497 986 aa12.19□□□□□ -0.46
CAPN3-221ENST00000638141 OSBPP22059 807 aa12.19□□□□□ -0.46
CAPN3-221ENST00000638141 RPL10P27635 214 aaKnown RBP12.19□□□□□ -0.46
CAPN3-221ENST00000638141 PRKAA2P54646 552 aa12.19□□□□□ -0.46
CAPN3-221ENST00000638141 CYP24A1Q07973 514 aa12.19□□□□□ -0.46
CAPN3-221ENST00000638141 ZNF252P-AS1Q0IIN9 211 aa12.19□□□□□ -0.46
CAPN3-221ENST00000638141 BST2Q10589 180 aaKnown RBP12.19□□□□□ -0.46
CAPN3-221ENST00000638141 ILF2Q12905 390 aaKnown RBP12.19□□□□□ -0.46
CAPN3-221ENST00000638141 SLC12A1Q13621 1099 aa12.19□□□□□ -0.46
CAPN3-221ENST00000638141 SNX17Q15036 470 aa12.19□□□□□ -0.46
CAPN3-221ENST00000638141 TMTC4Q5T4D3 741 aa12.19□□□□□ -0.46
CAPN3-221ENST00000638141 KCTD1Q719H9 257 aa12.19□□□□□ -0.46
CAPN3-221ENST00000638141 SV2AQ7L0J3 742 aa12.19□□□□□ -0.46
CAPN3-221ENST00000638141 ZNF598Q86UK7 904 aaKnown RBP12.19□□□□□ -0.46
CAPN3-221ENST00000638141 CBWD2Q8IUF1 395 aa12.19□□□□□ -0.46
CAPN3-221ENST00000638141 C10orf107Q8IVU9 208 aa12.19□□□□□ -0.46
CAPN3-221ENST00000638141 UNC45BQ8IWX7 931 aa12.19□□□□□ -0.46
CAPN3-221ENST00000638141 UNC5BQ8IZJ1 945 aa12.19□□□□□ -0.46
CAPN3-221ENST00000638141 ASCC1Q8N9N2 400 aaKnown RBP12.19□□□□□ -0.46
CAPN3-221ENST00000638141 AFG1LQ8WV93 481 aa12.19□□□□□ -0.46
CAPN3-221ENST00000638141 USP13Q92995 863 aaPredicted RBP12.19□□□□□ -0.46
CAPN3-221ENST00000638141 DCPSQ96C86 337 aaKnown RBP12.19□□□□□ -0.46
CAPN3-221ENST00000638141 ERLEC1Q96DZ1 483 aa12.19□□□□□ -0.46
CAPN3-221ENST00000638141 BEGAINQ9BUH8 593 aa12.19□□□□□ -0.46
CAPN3-221ENST00000638141 UNC93B1Q9H1C4 597 aa12.19□□□□□ -0.46
CAPN3-221ENST00000638141 NOL11Q9H8H0 719 aaKnown RBP12.19□□□□□ -0.46
CAPN3-221ENST00000638141 ZBTB26Q9HCK0 441 aa12.19□□□□□ -0.46
CAPN3-221ENST00000638141 NPAP1Q9NZP6 1156 aa12.19□□□□□ -0.46
CAPN3-221ENST00000638141 KLQ9UEF7 1012 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms