RNA–Protein interactions for RNA: ENST00000636934.1

CLN8-211, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5 BASIC

Gene CLN8, Length 1,790 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-211ENST00000636934 ARL8BQ9NVJ2 186 aa18.84■□□□□ 0.61
CLN8-211ENST00000636934 SDAD1Q9NVU7 687 aaKnown RBP eCLIP18.84■□□□□ 0.61
CLN8-211ENST00000636934 COMMD8Q9NX08 183 aa18.84■□□□□ 0.61
CLN8-211ENST00000636934 UBP1Q9NZI7 540 aa18.84■□□□□ 0.61
CLN8-211ENST00000636934 IL1RAPL1Q9NZN1 696 aa18.84■□□□□ 0.61
CLN8-211ENST00000636934 PPARGC1AQ9UBK2 798 aaKnown RBP18.84■□□□□ 0.61
CLN8-211ENST00000636934 NUP205Q92621 2012 aa18.84■□□□□ 0.61
CLN8-211ENST00000636934 PLXNA3P51805 1871 aa18.83■□□□□ 0.61
CLN8-211ENST00000636934 B4GALT3O60512 393 aa18.83■□□□□ 0.61
CLN8-211ENST00000636934 TOP3BO95985 862 aaKnown RBP18.83■□□□□ 0.61
CLN8-211ENST00000636934 RHOQP17081 205 aa18.83■□□□□ 0.61
CLN8-211ENST00000636934 TPH1P17752 444 aa18.83■□□□□ 0.61
CLN8-211ENST00000636934 PAMP19021 973 aa18.83■□□□□ 0.61
CLN8-211ENST00000636934 GTF2A1P52655 376 aaPredicted RBP18.83■□□□□ 0.61
CLN8-211ENST00000636934 MTA1Q13330 715 aa18.83■□□□□ 0.61
CLN8-211ENST00000636934 MBTPS1Q14703 1052 aa18.83■□□□□ 0.61
CLN8-211ENST00000636934 CTXN3Q4LDR2 81 aa18.83■□□□□ 0.61
CLN8-211ENST00000636934 ARHGAP36Q6ZRI8 547 aa18.83■□□□□ 0.61
CLN8-211ENST00000636934 ARHGAP24Q8N264 748 aa18.83■□□□□ 0.61
CLN8-211ENST00000636934 IPMKQ8NFU5 416 aa18.83■□□□□ 0.61
CLN8-211ENST00000636934 RAET1EQ8TD07 263 aa18.83■□□□□ 0.61
CLN8-211ENST00000636934 PXYLP1Q8TE99 480 aa18.83■□□□□ 0.61
CLN8-211ENST00000636934 AGAP11Q8TF27 550 aa18.83■□□□□ 0.61
CLN8-211ENST00000636934 AGAP2Q99490 1192 aa18.83■□□□□ 0.61
CLN8-211ENST00000636934 SEZ6LQ9BYH1 1024 aa18.83■□□□□ 0.61
CLN8-211ENST00000636934 STARD7Q9NQZ5 370 aa18.83■□□□□ 0.61
CLN8-211ENST00000636934 RBM22Q9NW64 420 aaKnown RBP eCLIP18.83■□□□□ 0.61
CLN8-211ENST00000636934 CLIC5Q9NZA1 410 aa18.83■□□□□ 0.61
CLN8-211ENST00000636934 IL37Q9NZH6 218 aa18.83■□□□□ 0.61
CLN8-211ENST00000636934 TMEM216Q9P0N5 145 aa18.83■□□□□ 0.61
CLN8-211ENST00000636934 A0A096LPK6 155 aa18.83■□□□□ 0.6
CLN8-211ENST00000636934 RALBP11234 206 aa18.83■□□□□ 0.6
CLN8-211ENST00000636934 NMBRP28336 390 aa18.83■□□□□ 0.6
CLN8-211ENST00000636934 PPM1JQ5JR12 505 aa18.83■□□□□ 0.6
CLN8-211ENST00000636934 CES4AQ5XG92 561 aa18.83■□□□□ 0.6
CLN8-211ENST00000636934 ZCCHC23Q6ZST2 131 aa18.83■□□□□ 0.6
CLN8-211ENST00000636934 UMODL1-AS1Q8N2C9 162 aa18.83■□□□□ 0.6
CLN8-211ENST00000636934 VPS39Q96JC1 886 aa18.83■□□□□ 0.6
CLN8-211ENST00000636934 RILPQ96NA2 401 aa18.83■□□□□ 0.6
CLN8-211ENST00000636934 TACO1Q9BSH4 297 aaKnown RBP18.83■□□□□ 0.6
CLN8-211ENST00000636934 FICDQ9BVA6 458 aa18.83■□□□□ 0.6
CLN8-211ENST00000636934 PRKD2Q9BZL6 878 aa18.83■□□□□ 0.6
CLN8-211ENST00000636934 RHOJQ9H4E5 214 aa18.83■□□□□ 0.6
CLN8-211ENST00000636934 NOP53Q9NZM5 478 aaKnown RBP18.83■□□□□ 0.6
CLN8-211ENST00000636934 IPO11Q9UI26 975 aaKnown RBP18.83■□□□□ 0.6
CLN8-211ENST00000636934 A0A1W2PQ45 241 aaPredicted RBP18.82■□□□□ 0.6
CLN8-211ENST00000636934 A0A1W2PQY0 241 aa18.82■□□□□ 0.6
CLN8-211ENST00000636934 A8MUI8 341 aa18.82■□□□□ 0.6
CLN8-211ENST00000636934 GYG2O15488 501 aa18.82■□□□□ 0.6
CLN8-211ENST00000636934 LMNAP02545 664 aaKnown RBP18.82■□□□□ 0.6
CLN8-211ENST00000636934 KCNA4P22459 653 aa18.82■□□□□ 0.6
CLN8-211ENST00000636934 YWHAQP27348 245 aa18.82■□□□□ 0.6
CLN8-211ENST00000636934 PAPOLAP51003 745 aaKnown RBP18.82■□□□□ 0.6
CLN8-211ENST00000636934 SMARCB1Q12824 385 aa18.82■□□□□ 0.6
CLN8-211ENST00000636934 DDR2Q16832 855 aa18.82■□□□□ 0.6
CLN8-211ENST00000636934 CMC1Q7Z7K0 106 aa18.82■□□□□ 0.6
CLN8-211ENST00000636934 CLEC14AQ86T13 490 aa18.82■□□□□ 0.6
CLN8-211ENST00000636934 C10orf107Q8IVU9 208 aa18.82■□□□□ 0.6
CLN8-211ENST00000636934 FAM13CQ8NE31 585 aa18.82■□□□□ 0.6
CLN8-211ENST00000636934 SPATA22Q8NHS9 363 aa18.82■□□□□ 0.6
CLN8-211ENST00000636934 GABPB2Q8TAK5 448 aaPredicted RBP18.82■□□□□ 0.6
CLN8-211ENST00000636934 RDH11Q8TC12 318 aa18.82■□□□□ 0.6
CLN8-211ENST00000636934 GPR22Q99680 433 aa18.82■□□□□ 0.6
CLN8-211ENST00000636934 MCMBPQ9BTE3 642 aa18.82■□□□□ 0.6
CLN8-211ENST00000636934 FSD1LQ9BXM9 530 aa18.82■□□□□ 0.6
CLN8-211ENST00000636934 ZYG11BQ9C0D3 744 aa18.82■□□□□ 0.6
CLN8-211ENST00000636934 NMUR2Q9GZQ4 415 aa18.82■□□□□ 0.6
CLN8-211ENST00000636934 TLK1Q9UKI8 766 aa18.82■□□□□ 0.6
CLN8-211ENST00000636934 DNAJC16Q9Y2G8 782 aa18.82■□□□□ 0.6
CLN8-211ENST00000636934 NUMBLQ9Y6R0 609 aa18.82■□□□□ 0.6
CLN8-211ENST00000636934 TMEM114B3SHH9 223 aa18.81■□□□□ 0.6
CLN8-211ENST00000636934 GNRH1P01148 92 aa18.81■□□□□ 0.6
CLN8-211ENST00000636934 SERPINA6P08185 405 aa18.81■□□□□ 0.6
CLN8-211ENST00000636934 KITP10721 976 aa18.81■□□□□ 0.6
CLN8-211ENST00000636934 SELPP16109 830 aa18.81■□□□□ 0.6
CLN8-211ENST00000636934 ADRA1AP35348 466 aa18.81■□□□□ 0.6
CLN8-211ENST00000636934 PGFP49763 221 aa18.81■□□□□ 0.6
CLN8-211ENST00000636934 RENBPP51606 427 aa18.81■□□□□ 0.6
CLN8-211ENST00000636934 PRKAA2P54646 552 aa18.81■□□□□ 0.6
CLN8-211ENST00000636934 ABCE1P61221 599 aaKnown RBP18.81■□□□□ 0.6
CLN8-211ENST00000636934 HNRNPDQ14103 355 aaKnown RBP18.81■□□□□ 0.6
CLN8-211ENST00000636934 MRPL58Q14197 206 aaKnown RBP18.81■□□□□ 0.6
CLN8-211ENST00000636934 LRRC8DQ7L1W4 858 aa18.81■□□□□ 0.6
CLN8-211ENST00000636934 C14orf80Q86SX3 495 aa18.81■□□□□ 0.6
CLN8-211ENST00000636934 ALYREFQ86V81 257 aaKnown RBP18.81■□□□□ 0.6
CLN8-211ENST00000636934 CNTN4Q8IWV2 1026 aa18.81■□□□□ 0.6
CLN8-211ENST00000636934 NSMCE1Q8WV22 266 aa18.81■□□□□ 0.6
CLN8-211ENST00000636934 OXCT2Q9BYC2 517 aaPredicted RBP18.81■□□□□ 0.6
CLN8-211ENST00000636934 UBE2OQ9C0C9 1292 aaKnown RBP18.81■□□□□ 0.6
CLN8-211ENST00000636934 SLC25A51Q9H1U9 297 aa18.81■□□□□ 0.6
CLN8-211ENST00000636934 MMADHCQ9H3L0 296 aaPredicted RBP18.81■□□□□ 0.6
CLN8-211ENST00000636934 GMIPQ9P107 970 aa18.81■□□□□ 0.6
CLN8-211ENST00000636934 MARCOQ9UEW3 520 aaPredicted RBP18.81■□□□□ 0.6
CLN8-211ENST00000636934 TCAF1Q9Y4C2 921 aa18.81■□□□□ 0.6
CLN8-211ENST00000636934 PCDHB7Q9Y5E2 793 aa18.81■□□□□ 0.6
CLN8-211ENST00000636934 FAM92AA1XBS5 289 aa18.81■□□□□ 0.6
CLN8-211ENST00000636934 ARVCFO00192 962 aa18.81■□□□□ 0.6
CLN8-211ENST00000636934 HLA-DQB2P05538 268 aa18.81■□□□□ 0.6
CLN8-211ENST00000636934 C2P06681 752 aa18.81■□□□□ 0.6
CLN8-211ENST00000636934 COL6A2P12110 1019 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms