RNA–Protein interactions for RNA: ENST00000636194.1

SCN1A-212, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 8,508 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-212ENST00000636194 XIAPP98170 497 aa6.09□□□□□ -1.43
SCN1A-212ENST00000636194 DMTNQ08495 405 aa6.09□□□□□ -1.43
SCN1A-212ENST00000636194 NAB1Q13506 487 aa6.09□□□□□ -1.43
SCN1A-212ENST00000636194 MDH1BQ5I0G3 518 aa6.09□□□□□ -1.43
SCN1A-212ENST00000636194 PPP1R15BQ5SWA1 713 aa6.09□□□□□ -1.43
SCN1A-212ENST00000636194 OGFRL1Q5TC84 451 aaPredicted RBP6.09□□□□□ -1.43
SCN1A-212ENST00000636194 OR7G1Q8NGA0 311 aa6.09□□□□□ -1.43
SCN1A-212ENST00000636194 NKX2-3Q8TAU0 364 aa6.09□□□□□ -1.43
SCN1A-212ENST00000636194 NXPE2Q96DL1 559 aa6.09□□□□□ -1.43
SCN1A-212ENST00000636194 PGAP3Q96FM1 320 aaPredicted RBP6.09□□□□□ -1.43
SCN1A-212ENST00000636194 TEKT5Q96M29 485 aa6.09□□□□□ -1.43
SCN1A-212ENST00000636194 MAGEB18Q96M61 343 aa6.09□□□□□ -1.43
SCN1A-212ENST00000636194 ERP44Q9BS26 406 aa6.09□□□□□ -1.43
SCN1A-212ENST00000636194 TMEM79Q9BSE2 394 aa6.09□□□□□ -1.43
SCN1A-212ENST00000636194 MLXIPLQ9NP71 852 aa6.09□□□□□ -1.43
SCN1A-212ENST00000636194 CHRAC1Q9NRG0 131 aa6.09□□□□□ -1.43
SCN1A-212ENST00000636194 ALKBH4Q9NXW9 302 aa6.09□□□□□ -1.43
SCN1A-212ENST00000636194 GABBR1Q9UBS5 961 aa6.09□□□□□ -1.43
SCN1A-212ENST00000636194 DNMT3LQ9UJW3 386 aa6.09□□□□□ -1.43
SCN1A-212ENST00000636194 CROTQ9UKG9 612 aa6.09□□□□□ -1.43
SCN1A-212ENST00000636194 SNX24Q9Y343 169 aa6.09□□□□□ -1.43
SCN1A-212ENST00000636194 PCDHGB1Q9Y5G3 927 aa6.09□□□□□ -1.43
SCN1A-212ENST00000636194 PCDHA10Q9Y5I2 948 aa6.09□□□□□ -1.43
SCN1A-212ENST00000636194 NUP205Q92621 2012 aa6.09□□□□□ -1.43
SCN1A-212ENST00000636194 MLH3Q9UHC1 1453 aa6.09□□□□□ -1.43
SCN1A-212ENST00000636194 SCN2AQ99250 2005 aa6.09□□□□□ -1.43
SCN1A-212ENST00000636194 CLCA1A8K7I4 914 aa6.09□□□□□ -1.43
SCN1A-212ENST00000636194 NR5A2O00482 541 aa6.09□□□□□ -1.43
SCN1A-212ENST00000636194 DCLK1O15075 740 aa6.09□□□□□ -1.43
SCN1A-212ENST00000636194 MFSD11O43934 449 aa6.09□□□□□ -1.43
SCN1A-212ENST00000636194 OR1I1O60431 355 aa6.09□□□□□ -1.43
SCN1A-212ENST00000636194 ATP6V1G1O75348 118 aa6.09□□□□□ -1.43
SCN1A-212ENST00000636194 MMP1P03956 469 aa6.09□□□□□ -1.43
SCN1A-212ENST00000636194 TFPIP10646 304 aa6.09□□□□□ -1.43
SCN1A-212ENST00000636194 NR2C1P13056 603 aa6.09□□□□□ -1.43
SCN1A-212ENST00000636194 ACAT1P24752 427 aaKnown RBP6.09□□□□□ -1.43
SCN1A-212ENST00000636194 DNAJA1P31689 397 aaKnown RBP6.09□□□□□ -1.43
SCN1A-212ENST00000636194 RFC5P40937 340 aa6.09□□□□□ -1.43
SCN1A-212ENST00000636194 CCNYL2Q5T2Q4 361 aa6.09□□□□□ -1.43
SCN1A-212ENST00000636194 BNC2Q6ZN30 1099 aaPredicted RBP6.09□□□□□ -1.43
SCN1A-212ENST00000636194 KBTBD8Q8NFY9 601 aa6.09□□□□□ -1.43
SCN1A-212ENST00000636194 OR2L8Q8NGY9 312 aa6.09□□□□□ -1.43
SCN1A-212ENST00000636194 PIGOQ8TEQ8 1089 aa6.09□□□□□ -1.43
SCN1A-212ENST00000636194 ZNF75CPQ92670 426 aaPredicted RBP6.09□□□□□ -1.43
SCN1A-212ENST00000636194 RNF31Q96EP0 1072 aa6.09□□□□□ -1.43
SCN1A-212ENST00000636194 EXOC2Q96KP1 924 aa6.09□□□□□ -1.43
SCN1A-212ENST00000636194 XKR8Q9H6D3 395 aa6.09□□□□□ -1.43
SCN1A-212ENST00000636194 JMJD4Q9H9V9 463 aa6.09□□□□□ -1.43
SCN1A-212ENST00000636194 MARCOQ9UEW3 520 aaPredicted RBP6.09□□□□□ -1.43
SCN1A-212ENST00000636194 ZNF639Q9UID6 485 aa6.09□□□□□ -1.43
SCN1A-212ENST00000636194 USP20Q9Y2K6 914 aa6.09□□□□□ -1.43
SCN1A-212ENST00000636194 TAF6LQ9Y6J9 622 aa6.09□□□□□ -1.43
SCN1A-212ENST00000636194 ITSN1Q15811 1721 aa6.09□□□□□ -1.43
SCN1A-212ENST00000636194 CAPN14A8MX76 684 aa6.09□□□□□ -1.43
SCN1A-212ENST00000636194 HHLA1C9JL84 531 aa6.09□□□□□ -1.43
SCN1A-212ENST00000636194 O00370 1275 aa6.09□□□□□ -1.43
SCN1A-212ENST00000636194 GH1P01241 217 aa6.09□□□□□ -1.43
SCN1A-212ENST00000636194 CSTBP04080 98 aaKnown RBP6.09□□□□□ -1.43
SCN1A-212ENST00000636194 SERPINE1P05121 402 aa6.09□□□□□ -1.43
SCN1A-212ENST00000636194 GYG1P46976 350 aa6.09□□□□□ -1.43
SCN1A-212ENST00000636194 PUM1Q14671 1186 aaKnown RBP eCLIP6.09□□□□□ -1.43
SCN1A-212ENST00000636194 SNAPC1Q16533 368 aa6.09□□□□□ -1.43
SCN1A-212ENST00000636194 ZNF613Q6PF04 617 aa6.09□□□□□ -1.43
SCN1A-212ENST00000636194 GPR135Q8IZ08 494 aa6.09□□□□□ -1.43
SCN1A-212ENST00000636194 A1CFQ9NQ94 594 aaKnown RBP6.09□□□□□ -1.43
SCN1A-212ENST00000636194 TBC1D13Q9NVG8 400 aa6.09□□□□□ -1.43
SCN1A-212ENST00000636194 ANGPT4Q9Y264 503 aa6.09□□□□□ -1.43
SCN1A-212ENST00000636194 AP1M2Q9Y6Q5 423 aa6.09□□□□□ -1.43
SCN1A-212ENST00000636194 SHROOM2Q13796 1616 aa6.09□□□□□ -1.43
SCN1A-212ENST00000636194 ERBB4Q15303 1308 aa6.09□□□□□ -1.43
SCN1A-212ENST00000636194 DNMBPQ6XZF7 1577 aa6.09□□□□□ -1.43
SCN1A-212ENST00000636194 CIAO1O76071 339 aa6.09□□□□□ -1.43
SCN1A-212ENST00000636194 FBXO21O94952 628 aa6.09□□□□□ -1.43
SCN1A-212ENST00000636194 DHFRP00374 187 aa6.09□□□□□ -1.43
SCN1A-212ENST00000636194 PDGFRAP16234 1089 aa6.09□□□□□ -1.43
SCN1A-212ENST00000636194 CHKAP35790 457 aa6.09□□□□□ -1.43
SCN1A-212ENST00000636194 GNALP38405 381 aa6.09□□□□□ -1.43
SCN1A-212ENST00000636194 CDK10Q15131 360 aa6.09□□□□□ -1.43
SCN1A-212ENST00000636194 FNDC3BQ53EP0 1204 aaKnown RBP6.09□□□□□ -1.43
SCN1A-212ENST00000636194 TMEM63BQ5T3F8 832 aa6.09□□□□□ -1.43
SCN1A-212ENST00000636194 BORAQ6PGQ7 559 aa6.09□□□□□ -1.43
SCN1A-212ENST00000636194 TSHZ1Q6ZSZ6 1077 aa6.09□□□□□ -1.43
SCN1A-212ENST00000636194 MYRFLQ96LU7 910 aa6.09□□□□□ -1.43
SCN1A-212ENST00000636194 STRBPQ96SI9 672 aaKnown RBP6.09□□□□□ -1.43
SCN1A-212ENST00000636194 TNKS2Q9H2K2 1166 aa6.09□□□□□ -1.43
SCN1A-212ENST00000636194 DHRS7Q9Y394 339 aa6.09□□□□□ -1.43
SCN1A-212ENST00000636194 SCN3AQ9NY46 2000 aa6.09□□□□□ -1.43
SCN1A-212ENST00000636194 CDC42BPGQ6DT37 1551 aa6.09□□□□□ -1.43
SCN1A-212ENST00000636194 RBAK-RBAKDNI3L0D1 243 aa6.09□□□□□ -1.43
SCN1A-212ENST00000636194 RTCAO00442 366 aaKnown RBP6.09□□□□□ -1.43
SCN1A-212ENST00000636194 DGAT1O75907 488 aa6.09□□□□□ -1.43
SCN1A-212ENST00000636194 NOL4O94818 638 aa6.09□□□□□ -1.43
SCN1A-212ENST00000636194 NPTXRO95502 500 aa6.09□□□□□ -1.43
SCN1A-212ENST00000636194 CYP2E1P05181 493 aaPredicted RBP6.09□□□□□ -1.43
SCN1A-212ENST00000636194 CCNYL3P0C7X3 344 aa6.09□□□□□ -1.43
SCN1A-212ENST00000636194 ZNF7P17097 686 aaPredicted RBP6.09□□□□□ -1.43
SCN1A-212ENST00000636194 CASP5P51878 434 aa6.09□□□□□ -1.43
SCN1A-212ENST00000636194 ITGA8P53708 1063 aa6.09□□□□□ -1.43
SCN1A-212ENST00000636194 TAS2R41P59536 307 aa6.09□□□□□ -1.43
SCN1A-212ENST00000636194 CHRNDQ07001 517 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms