RNA–Protein interactions for RNA: ENST00000629346.2

CHD2-218, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5 BASIC

Gene CHD2, Length 1,249 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-218ENST00000629346 NUGGCQ68CJ6 796 aa12.26□□□□□ -0.45
CHD2-218ENST00000629346 ABI3BPQ7Z7G0 1075 aa12.26□□□□□ -0.45
CHD2-218ENST00000629346 HORMAD1Q86X24 394 aa12.26□□□□□ -0.45
CHD2-218ENST00000629346 SLC35F3Q8IY50 421 aa12.26□□□□□ -0.45
CHD2-218ENST00000629346 CEP57L1Q8IYX8 460 aa12.26□□□□□ -0.45
CHD2-218ENST00000629346 FRS2Q8WU20 508 aa12.26□□□□□ -0.45
CHD2-218ENST00000629346 GLMNQ92990 594 aa12.26□□□□□ -0.45
CHD2-218ENST00000629346 BMFQ96LC9 184 aa12.26□□□□□ -0.45
CHD2-218ENST00000629346 SPATA32Q96LK8 384 aa12.26□□□□□ -0.45
CHD2-218ENST00000629346 IRX2Q9BZI1 471 aaPredicted RBP12.26□□□□□ -0.45
CHD2-218ENST00000629346 UBXN6Q9BZV1 441 aa12.26□□□□□ -0.45
CHD2-218ENST00000629346 NUCKS1Q9H1E3 243 aaKnown RBP12.26□□□□□ -0.45
CHD2-218ENST00000629346 CYP3A43Q9HB55 503 aa12.26□□□□□ -0.45
CHD2-218ENST00000629346 LRRC4Q9HBW1 653 aa12.26□□□□□ -0.45
CHD2-218ENST00000629346 ABCC13Q9NSE7 274 aa12.26□□□□□ -0.45
CHD2-218ENST00000629346 PPM1HQ9ULR3 514 aa12.26□□□□□ -0.45
CHD2-218ENST00000629346 ATP6V1DQ9Y5K8 247 aa12.26□□□□□ -0.45
CHD2-218ENST00000629346 CACNA1DQ01668 2161 aa12.25□□□□□ -0.45
CHD2-218ENST00000629346 MTSS1O43312 755 aa12.25□□□□□ -0.45
CHD2-218ENST00000629346 AGFG2O95081 481 aa12.25□□□□□ -0.45
CHD2-218ENST00000629346 CASP1P29466 404 aa12.25□□□□□ -0.45
CHD2-218ENST00000629346 ADKP55263 362 aaKnown RBP12.25□□□□□ -0.45
CHD2-218ENST00000629346 DCAF6Q58WW2 860 aa12.25□□□□□ -0.45
CHD2-218ENST00000629346 MS4A13Q5J8X5 152 aa12.25□□□□□ -0.45
CHD2-218ENST00000629346 PIP5KL1Q5T9C9 394 aa12.25□□□□□ -0.45
CHD2-218ENST00000629346 SEL1L3Q68CR1 1132 aa12.25□□□□□ -0.45
CHD2-218ENST00000629346 PARGQ86W56 976 aa12.25□□□□□ -0.45
CHD2-218ENST00000629346 ATCAYQ86WG3 371 aa12.25□□□□□ -0.45
CHD2-218ENST00000629346 DCP2Q8IU60 420 aaKnown RBP12.25□□□□□ -0.45
CHD2-218ENST00000629346 C12orf56Q8IXR9 622 aa12.25□□□□□ -0.45
CHD2-218ENST00000629346 ANKRD52Q8NB46 1076 aa12.25□□□□□ -0.45
CHD2-218ENST00000629346 USP7Q93009 1102 aa12.25□□□□□ -0.45
CHD2-218ENST00000629346 NAT6Q93015 286 aa12.25□□□□□ -0.45
CHD2-218ENST00000629346 TATDN2Q93075 761 aa12.25□□□□□ -0.45
CHD2-218ENST00000629346 GFM1Q96RP9 751 aaKnown RBP12.25□□□□□ -0.45
CHD2-218ENST00000629346 DDX50Q9BQ39 737 aaKnown RBP12.25□□□□□ -0.45
CHD2-218ENST00000629346 BOCQ9BWV1 1114 aa12.25□□□□□ -0.45
CHD2-218ENST00000629346 IMPG2Q9BZV3 1241 aa12.25□□□□□ -0.45
CHD2-218ENST00000629346 BLZF1Q9H2G9 400 aa12.25□□□□□ -0.45
CHD2-218ENST00000629346 TMPRSS4Q9NRS4 437 aa12.25□□□□□ -0.45
CHD2-218ENST00000629346 FOXJ2Q9P0K8 574 aa12.25□□□□□ -0.45
CHD2-218ENST00000629346 GULP1Q9UBP9 304 aa12.25□□□□□ -0.45
CHD2-218ENST00000629346 PADI4Q9UM07 663 aa12.25□□□□□ -0.45
CHD2-218ENST00000629346 ZFR2Q9UPR6 939 aaKnown RBP12.25□□□□□ -0.45
CHD2-218ENST00000629346 LOXL2Q9Y4K0 774 aa12.25□□□□□ -0.45
CHD2-218ENST00000629346 SPTY2D1-AS1A0A0U1RR47 76 aa12.24□□□□□ -0.45
CHD2-218ENST00000629346 PVALEFA0A1B0GWK0 134 aa12.24□□□□□ -0.45
CHD2-218ENST00000629346 A1L4Q6 167 aa12.24□□□□□ -0.45
CHD2-218ENST00000629346 TMX2-CTNND1H3BSU7 103 aa12.24□□□□□ -0.45
CHD2-218ENST00000629346 KPNA3O00505 521 aaPredicted RBP12.24□□□□□ -0.45
CHD2-218ENST00000629346 NTN3O00634 580 aaPredicted RBP12.24□□□□□ -0.45
CHD2-218ENST00000629346 TPP1O14773 563 aa12.24□□□□□ -0.45
CHD2-218ENST00000629346 ACTN4O43707 911 aaKnown RBP12.24□□□□□ -0.45
CHD2-218ENST00000629346 GCATO75600 419 aa12.24□□□□□ -0.45
CHD2-218ENST00000629346 MOCS2O96007 188 aaPredicted RBP12.24□□□□□ -0.45
CHD2-218ENST00000629346 IGLV3-27P01718 113 aa12.24□□□□□ -0.45
CHD2-218ENST00000629346 LCP1P13796 627 aa12.24□□□□□ -0.45
CHD2-218ENST00000629346 PDGFRAP16234 1089 aa12.24□□□□□ -0.45
CHD2-218ENST00000629346 POU3F2P20265 443 aaPredicted RBP12.24□□□□□ -0.45
CHD2-218ENST00000629346 CMA1P23946 247 aa12.24□□□□□ -0.45
CHD2-218ENST00000629346 MAPK10P53779 464 aa12.24□□□□□ -0.45
CHD2-218ENST00000629346 RIPPLY3P57055 190 aa12.24□□□□□ -0.45
CHD2-218ENST00000629346 CCL7P80098 99 aa12.24□□□□□ -0.45
CHD2-218ENST00000629346 CUL4BQ13620 913 aa12.24□□□□□ -0.45
CHD2-218ENST00000629346 BECN1Q14457 450 aa12.24□□□□□ -0.45
CHD2-218ENST00000629346 NEK5Q6P3R8 708 aa12.24□□□□□ -0.45
CHD2-218ENST00000629346 Q6ZVU0 165 aa12.24□□□□□ -0.45
CHD2-218ENST00000629346 RBFAQ8N0V3 343 aa12.24□□□□□ -0.45
CHD2-218ENST00000629346 LGI2Q8N0V4 545 aa12.24□□□□□ -0.45
CHD2-218ENST00000629346 SIX6OS1Q8N1H7 587 aa12.24□□□□□ -0.45
CHD2-218ENST00000629346 SLC4A11Q8NBS3 891 aa12.24□□□□□ -0.45
CHD2-218ENST00000629346 PHF12Q96QT6 1004 aa12.24□□□□□ -0.45
CHD2-218ENST00000629346 SLC12A9Q9BXP2 914 aa12.24□□□□□ -0.45
CHD2-218ENST00000629346 NIF3L1Q9GZT8 377 aa12.24□□□□□ -0.45
CHD2-218ENST00000629346 TCEAL2Q9H3H9 227 aaPredicted RBP12.24□□□□□ -0.45
CHD2-218ENST00000629346 SLC39A2Q9NP94 309 aa12.24□□□□□ -0.45
CHD2-218ENST00000629346 USP25Q9UHP3 1055 aa12.24□□□□□ -0.45
CHD2-218ENST00000629346 SERTAD1Q9UHV2 236 aa12.24□□□□□ -0.45
CHD2-218ENST00000629346 RABGEF1Q9UJ41 708 aa12.24□□□□□ -0.45
CHD2-218ENST00000629346 HS3ST3A1Q9Y663 406 aa12.24□□□□□ -0.45
CHD2-218ENST00000629346 A0A1B0GVL5 298 aa12.23□□□□□ -0.45
CHD2-218ENST00000629346 D6RAR5 112 aa12.23□□□□□ -0.45
CHD2-218ENST00000629346 PIK3R2O00459 728 aa12.23□□□□□ -0.45
CHD2-218ENST00000629346 RIOK3O14730 519 aaKnown RBP12.23□□□□□ -0.45
CHD2-218ENST00000629346 MCF2LO15068 1137 aa12.23□□□□□ -0.45
CHD2-218ENST00000629346 RAD51BO15315 384 aa12.23□□□□□ -0.45
CHD2-218ENST00000629346 PAK4O96013 591 aaPredicted RBP12.23□□□□□ -0.45
CHD2-218ENST00000629346 ANXA6P08133 673 aa12.23□□□□□ -0.45
CHD2-218ENST00000629346 PFKFB1P16118 471 aa12.23□□□□□ -0.45
CHD2-218ENST00000629346 NOS2P35228 1153 aa12.23□□□□□ -0.45
CHD2-218ENST00000629346 ETV5P41161 510 aa12.23□□□□□ -0.45
CHD2-218ENST00000629346 NUCB2P80303 420 aa12.23□□□□□ -0.45
CHD2-218ENST00000629346 PDE1CQ14123 709 aaPredicted RBP12.23□□□□□ -0.45
CHD2-218ENST00000629346 DLG2Q15700 870 aa12.23□□□□□ -0.45
CHD2-218ENST00000629346 KNOP1Q1ED39 458 aaKnown RBP12.23□□□□□ -0.45
CHD2-218ENST00000629346 GOLGA7BQ2TAP0 167 aa12.23□□□□□ -0.45
CHD2-218ENST00000629346 PRRT3Q5FWE3 981 aa12.23□□□□□ -0.45
CHD2-218ENST00000629346 TPRG1LQ5T0D9 272 aa12.23□□□□□ -0.45
CHD2-218ENST00000629346 ZNF787Q6DD87 383 aa12.23□□□□□ -0.45
CHD2-218ENST00000629346 ESRP1Q6NXG1 681 aaKnown RBP12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms