RNA–Protein interactions for RNA: ENST00000626315.1

SCARNA15.3-201, small Cajal body-specific RNA 15, humanhuman

BASIC

Gene SCARNA15, Length 122 nt, Biotype scaRNA, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA15.3-201ENST00000626315 PTGFRNQ9P2B2 879 aa3.13□□□□□ -1.91
SCARNA15.3-201ENST00000626315 ARHGAP20Q9P2F6 1191 aa3.13□□□□□ -1.91
SCARNA15.3-201ENST00000626315 ORC3Q9UBD5 711 aaPredicted RBP3.13□□□□□ -1.91
SCARNA15.3-201ENST00000626315 NKX1-2Q9UD57 310 aaPredicted RBP3.13□□□□□ -1.91
SCARNA15.3-201ENST00000626315 SEC14L3Q9UDX4 400 aa3.13□□□□□ -1.91
SCARNA15.3-201ENST00000626315 LRWD1Q9UFC0 647 aa3.13□□□□□ -1.91
SCARNA15.3-201ENST00000626315 SEC63Q9UGP8 760 aaKnown RBP3.13□□□□□ -1.91
SCARNA15.3-201ENST00000626315 CYTH4Q9UIA0 394 aa3.13□□□□□ -1.91
SCARNA15.3-201ENST00000626315 ANAPC4Q9UJX5 808 aa3.13□□□□□ -1.91
SCARNA15.3-201ENST00000626315 FBXO10Q9UK96 956 aa3.13□□□□□ -1.91
SCARNA15.3-201ENST00000626315 SLC27A6Q9Y2P4 619 aa3.13□□□□□ -1.91
SCARNA15.3-201ENST00000626315 PCDHGA6Q9Y5G7 932 aa3.13□□□□□ -1.91
SCARNA15.3-201ENST00000626315 TDRD15B5MCY1 1934 aaKnown RBP3.13□□□□□ -1.91
SCARNA15.3-201ENST00000626315 CADP27708 2225 aa3.12□□□□□ -1.91
SCARNA15.3-201ENST00000626315 ANK3Q12955 4377 aaKnown RBP3.12□□□□□ -1.91
SCARNA15.3-201ENST00000626315 IGHV5-10-1A0A0J9YXX1 117 aa3.12□□□□□ -1.91
SCARNA15.3-201ENST00000626315 TMEM150BA6NC51 233 aa3.12□□□□□ -1.91
SCARNA15.3-201ENST00000626315 C21orf140B9A014 251 aa3.12□□□□□ -1.91
SCARNA15.3-201ENST00000626315 RNF223E7ERA6 249 aa3.12□□□□□ -1.91
SCARNA15.3-201ENST00000626315 IFIT3O14879 490 aaKnown RBP3.12□□□□□ -1.91
SCARNA15.3-201ENST00000626315 POLR1CO15160 346 aaPredicted RBP3.12□□□□□ -1.91
SCARNA15.3-201ENST00000626315 TMPRSS2O15393 492 aa3.12□□□□□ -1.91
SCARNA15.3-201ENST00000626315 TGFB1I1O43294 461 aa3.12□□□□□ -1.91
SCARNA15.3-201ENST00000626315 TCF21O43680 179 aa3.12□□□□□ -1.91
SCARNA15.3-201ENST00000626315 SLC19A2O60779 497 aa3.12□□□□□ -1.91
SCARNA15.3-201ENST00000626315 PMPCBO75439 489 aa3.12□□□□□ -1.91
SCARNA15.3-201ENST00000626315 S1PR4O95977 384 aa3.12□□□□□ -1.91
SCARNA15.3-201ENST00000626315 FOSP01100 380 aaPredicted RBP3.12□□□□□ -1.91
SCARNA15.3-201ENST00000626315 TPOP07202 933 aa3.12□□□□□ -1.91
SCARNA15.3-201ENST00000626315 IRF1P10914 325 aa3.12□□□□□ -1.91
SCARNA15.3-201ENST00000626315 NID1P14543 1247 aa3.12□□□□□ -1.91
SCARNA15.3-201ENST00000626315 PNLIPP16233 465 aa3.12□□□□□ -1.91
SCARNA15.3-201ENST00000626315 GLB1P16278 677 aa3.12□□□□□ -1.91
SCARNA15.3-201ENST00000626315 TYRP1P17643 537 aa3.12□□□□□ -1.91
SCARNA15.3-201ENST00000626315 SRD5A1P18405 259 aa3.12□□□□□ -1.91
SCARNA15.3-201ENST00000626315 CD53P19397 219 aa3.12□□□□□ -1.91
SCARNA15.3-201ENST00000626315 UGT1A4P22310 534 aa3.12□□□□□ -1.91
SCARNA15.3-201ENST00000626315 CDC27P30260 824 aa3.12□□□□□ -1.91
SCARNA15.3-201ENST00000626315 ETV3P41162 512 aa3.12□□□□□ -1.91
SCARNA15.3-201ENST00000626315 PTGIRP43119 386 aa3.12□□□□□ -1.91
SCARNA15.3-201ENST00000626315 RPS15P62841 145 aaKnown RBP3.12□□□□□ -1.91
SCARNA15.3-201ENST00000626315 TSPY1Q01534 308 aa3.12□□□□□ -1.91
SCARNA15.3-201ENST00000626315 COL10A1Q03692 680 aa3.12□□□□□ -1.91
SCARNA15.3-201ENST00000626315 NR5A1Q13285 461 aa3.12□□□□□ -1.91
SCARNA15.3-201ENST00000626315 BIRC2Q13490 618 aa3.12□□□□□ -1.91
SCARNA15.3-201ENST00000626315 ACOX1Q15067 660 aa3.12□□□□□ -1.91
SCARNA15.3-201ENST00000626315 C3AR1Q16581 482 aa3.12□□□□□ -1.91
SCARNA15.3-201ENST00000626315 UGCGQ16739 394 aa3.12□□□□□ -1.91
SCARNA15.3-201ENST00000626315 HYAL4Q2M3T9 481 aa3.12□□□□□ -1.91
SCARNA15.3-201ENST00000626315 DCAF4L1Q3SXM0 396 aa3.12□□□□□ -1.91
SCARNA15.3-201ENST00000626315 KMT5BQ4FZB7 885 aa3.12□□□□□ -1.91
SCARNA15.3-201ENST00000626315 FKBP15Q5T1M5 1219 aa3.12□□□□□ -1.91
SCARNA15.3-201ENST00000626315 FAXCQ5TGI0 409 aa3.12□□□□□ -1.91
SCARNA15.3-201ENST00000626315 B3GNTL1Q67FW5 361 aaPredicted RBP3.12□□□□□ -1.91
SCARNA15.3-201ENST00000626315 SMYD5Q6GMV2 418 aa3.12□□□□□ -1.91
SCARNA15.3-201ENST00000626315 NAPRTQ6XQN6 538 aa3.12□□□□□ -1.91
SCARNA15.3-201ENST00000626315 SPOCD1Q6ZMY3 1216 aa3.12□□□□□ -1.91
SCARNA15.3-201ENST00000626315 SPRED1Q7Z699 444 aa3.12□□□□□ -1.91
SCARNA15.3-201ENST00000626315 SYVN1Q86TM6 617 aa3.12□□□□□ -1.91
SCARNA15.3-201ENST00000626315 FAM35AQ86V20 835 aa3.12□□□□□ -1.91
SCARNA15.3-201ENST00000626315 SFR1Q86XK3 245 aa3.12□□□□□ -1.91
SCARNA15.3-201ENST00000626315 MMAAQ8IVH4 418 aaKnown RBP3.12□□□□□ -1.91
SCARNA15.3-201ENST00000626315 SCN4BQ8IWT1 228 aa3.12□□□□□ -1.91
SCARNA15.3-201ENST00000626315 ARFGAP1Q8N6T3 406 aa3.12□□□□□ -1.91
SCARNA15.3-201ENST00000626315 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.12□□□□□ -1.91
SCARNA15.3-201ENST00000626315 KIAA0895Q8NCT3 520 aa3.12□□□□□ -1.91
SCARNA15.3-201ENST00000626315 ASB5Q8WWX0 329 aa3.12□□□□□ -1.91
SCARNA15.3-201ENST00000626315 PIGTQ969N2 578 aa3.12□□□□□ -1.91
SCARNA15.3-201ENST00000626315 MAGED4Q96JG8 741 aa3.12□□□□□ -1.91
SCARNA15.3-201ENST00000626315 CNDP1Q96KN2 507 aa3.12□□□□□ -1.91
SCARNA15.3-201ENST00000626315 CCDC138Q96M89 665 aa3.12□□□□□ -1.91
SCARNA15.3-201ENST00000626315 WWC2-AS2Q96NR7 200 aa3.12□□□□□ -1.91
SCARNA15.3-201ENST00000626315 CGRRF1Q99675 332 aa3.12□□□□□ -1.91
SCARNA15.3-201ENST00000626315 ULBP3Q9BZM4 244 aa3.12□□□□□ -1.91
SCARNA15.3-201ENST00000626315 RSPH9Q9H1X1 276 aaPredicted RBP3.12□□□□□ -1.91
SCARNA15.3-201ENST00000626315 ACTL8Q9H568 366 aa3.12□□□□□ -1.91
SCARNA15.3-201ENST00000626315 MARCH2Q9P0N8 246 aa3.12□□□□□ -1.91
SCARNA15.3-201ENST00000626315 APOBEC3BQ9UH17 382 aaKnown RBP3.12□□□□□ -1.91
SCARNA15.3-201ENST00000626315 LSM7Q9UK45 103 aaKnown RBP3.12□□□□□ -1.91
SCARNA15.3-201ENST00000626315 APPL1Q9UKG1 709 aa3.12□□□□□ -1.91
SCARNA15.3-201ENST00000626315 PADI1Q9ULC6 663 aa3.12□□□□□ -1.91
SCARNA15.3-201ENST00000626315 GPR34Q9UPC5 381 aa3.12□□□□□ -1.91
SCARNA15.3-201ENST00000626315 MTMR6Q9Y217 621 aa3.12□□□□□ -1.91
SCARNA15.3-201ENST00000626315 NOP58Q9Y2X3 529 aaKnown RBP3.12□□□□□ -1.91
SCARNA15.3-201ENST00000626315 MEMO1Q9Y316 297 aa3.12□□□□□ -1.91
SCARNA15.3-201ENST00000626315 LUC7L2Q9Y383 392 aaKnown RBP3.12□□□□□ -1.91
SCARNA15.3-201ENST00000626315 PPME1Q9Y570 386 aa3.12□□□□□ -1.91
SCARNA15.3-201ENST00000626315 USF3Q68DE3 2245 aa3.12□□□□□ -1.91
SCARNA15.3-201ENST00000626315 CKAP5Q14008 2032 aa3.12□□□□□ -1.91
SCARNA15.3-201ENST00000626315 A0A087X1B8 175 aa3.11□□□□□ -1.91
SCARNA15.3-201ENST00000626315 SPTY2D1-AS1A0A0U1RR47 76 aa3.11□□□□□ -1.91
SCARNA15.3-201ENST00000626315 ZNF840PA6NDX5 716 aa3.11□□□□□ -1.91
SCARNA15.3-201ENST00000626315 FAM90A27PA6NNH2 459 aa3.11□□□□□ -1.91
SCARNA15.3-201ENST00000626315 A6NNZ2 444 aa3.11□□□□□ -1.91
SCARNA15.3-201ENST00000626315 ACTN4O43707 911 aaKnown RBP3.11□□□□□ -1.91
SCARNA15.3-201ENST00000626315 DKC1O60832 514 aaKnown RBP eCLIP3.11□□□□□ -1.91
SCARNA15.3-201ENST00000626315 GCATO75600 419 aa3.11□□□□□ -1.91
SCARNA15.3-201ENST00000626315 ADH1BP00325 375 aa3.11□□□□□ -1.91
SCARNA15.3-201ENST00000626315 MT-ND3P03897 115 aa3.11□□□□□ -1.91
SCARNA15.3-201ENST00000626315 CYBBP04839 570 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms