RNA–Protein interactions for RNA: ENST00000621990.4

PDPN-212, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 2,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-212ENST00000621990 B3GAT3O94766 335 aa9.6□□□□□ -0.87
PDPN-212ENST00000621990 CTSHP09668 335 aa9.6□□□□□ -0.87
PDPN-212ENST00000621990 ADRA1AP35348 466 aa9.6□□□□□ -0.87
PDPN-212ENST00000621990 GMPRP36959 345 aa9.6□□□□□ -0.87
PDPN-212ENST00000621990 HK2P52789 917 aa9.6□□□□□ -0.87
PDPN-212ENST00000621990 IRF9Q00978 393 aa9.6□□□□□ -0.87
PDPN-212ENST00000621990 NRG1Q02297 640 aaPredicted RBP9.6□□□□□ -0.87
PDPN-212ENST00000621990 GRIK3Q13003 919 aa9.6□□□□□ -0.87
PDPN-212ENST00000621990 THOC5Q13769 683 aaKnown RBP9.6□□□□□ -0.87
PDPN-212ENST00000621990 ANO4Q32M45 955 aa9.6□□□□□ -0.87
PDPN-212ENST00000621990 SNX30Q5VWJ9 437 aa9.6□□□□□ -0.87
PDPN-212ENST00000621990 METTL21CQ5VZV1 264 aa9.6□□□□□ -0.87
PDPN-212ENST00000621990 DENND5AQ6IQ26 1287 aa9.6□□□□□ -0.87
PDPN-212ENST00000621990 MYLK4Q86YV6 388 aaPredicted RBP9.6□□□□□ -0.87
PDPN-212ENST00000621990 ACVR1CQ8NER5 493 aa9.6□□□□□ -0.87
PDPN-212ENST00000621990 PTCD2Q8WV60 388 aaKnown RBP9.6□□□□□ -0.87
PDPN-212ENST00000621990 RSPH1Q8WYR4 309 aa9.6□□□□□ -0.87
PDPN-212ENST00000621990 CELF6Q96J87 481 aaKnown RBP9.6□□□□□ -0.87
PDPN-212ENST00000621990 FAM161BQ96MY7 647 aa9.6□□□□□ -0.87
PDPN-212ENST00000621990 PANX3Q96QZ0 392 aa9.6□□□□□ -0.87
PDPN-212ENST00000621990 CDH19Q9H159 772 aa9.6□□□□□ -0.87
PDPN-212ENST00000621990 RHOJQ9H4E5 214 aa9.6□□□□□ -0.87
PDPN-212ENST00000621990 CAB39LQ9H9S4 337 aa9.6□□□□□ -0.87
PDPN-212ENST00000621990 MRM3Q9HC36 420 aaKnown RBP9.6□□□□□ -0.87
PDPN-212ENST00000621990 GPAMQ9HCL2 828 aa9.6□□□□□ -0.87
PDPN-212ENST00000621990 OXSMQ9NWU1 459 aa9.6□□□□□ -0.87
PDPN-212ENST00000621990 PADI3Q9ULW8 664 aa9.6□□□□□ -0.87
PDPN-212ENST00000621990 PLXNA3P51805 1871 aa9.6□□□□□ -0.87
PDPN-212ENST00000621990 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.59□□□□□ -0.87
PDPN-212ENST00000621990 CTGFP29279 349 aa9.59□□□□□ -0.87
PDPN-212ENST00000621990 PRDX6P30041 224 aa9.59□□□□□ -0.87
PDPN-212ENST00000621990 PRKAA2P54646 552 aa9.59□□□□□ -0.87
PDPN-212ENST00000621990 HUNKP57058 714 aa9.59□□□□□ -0.87
PDPN-212ENST00000621990 TUSC3Q13454 348 aa9.59□□□□□ -0.87
PDPN-212ENST00000621990 PPP2R5DQ14738 602 aa9.59□□□□□ -0.87
PDPN-212ENST00000621990 NAA25Q14CX7 972 aa9.59□□□□□ -0.87
PDPN-212ENST00000621990 DLG2Q15700 870 aa9.59□□□□□ -0.87
PDPN-212ENST00000621990 SMAD1Q15797 465 aaKnown RBP9.59□□□□□ -0.87
PDPN-212ENST00000621990 TSNAXIP1Q2TAA8 658 aa9.59□□□□□ -0.87
PDPN-212ENST00000621990 PCID2Q5JVF3 399 aa9.59□□□□□ -0.87
PDPN-212ENST00000621990 PKN3Q6P5Z2 889 aa9.59□□□□□ -0.87
PDPN-212ENST00000621990 LRRC74BQ6ZQY2 392 aa9.59□□□□□ -0.87
PDPN-212ENST00000621990 RIPOR1Q6ZS17 1223 aa9.59□□□□□ -0.87
PDPN-212ENST00000621990 OTOP3Q7RTS5 596 aa9.59□□□□□ -0.87
PDPN-212ENST00000621990 IFNL1Q8IU54 200 aa9.59□□□□□ -0.87
PDPN-212ENST00000621990 FAM136AQ96C01 138 aa9.59□□□□□ -0.87
PDPN-212ENST00000621990 SUSD3Q96L08 255 aa9.59□□□□□ -0.87
PDPN-212ENST00000621990 APOL2Q9BQE5 337 aa9.59□□□□□ -0.87
PDPN-212ENST00000621990 IARS2Q9NSE4 1012 aaKnown RBP9.59□□□□□ -0.87
PDPN-212ENST00000621990 ABCC13Q9NSE7 274 aa9.59□□□□□ -0.87
PDPN-212ENST00000621990 FNIP2Q9P278 1114 aa9.59□□□□□ -0.87
PDPN-212ENST00000621990 MID2Q9UJV3 735 aa9.59□□□□□ -0.87
PDPN-212ENST00000621990 MYO16Q9Y6X6 1858 aa9.59□□□□□ -0.87
PDPN-212ENST00000621990 CEP350Q5VT06 3117 aa9.59□□□□□ -0.87
PDPN-212ENST00000621990 TARM1B6A8C7 271 aa9.59□□□□□ -0.87
PDPN-212ENST00000621990 TNPO2O14787 897 aaKnown RBP9.59□□□□□ -0.87
PDPN-212ENST00000621990 MATN3O15232 486 aa9.59□□□□□ -0.87
PDPN-212ENST00000621990 TRIM13O60858 407 aa9.59□□□□□ -0.87
PDPN-212ENST00000621990 SMNDC1O75940 238 aaKnown RBP eCLIP9.59□□□□□ -0.87
PDPN-212ENST00000621990 ANXA9O76027 345 aa9.59□□□□□ -0.87
PDPN-212ENST00000621990 SBK3P0C264 359 aa9.59□□□□□ -0.87
PDPN-212ENST00000621990 SRGAP2BP0DMP2 458 aa9.59□□□□□ -0.87
PDPN-212ENST00000621990 COL6A2P12110 1019 aa9.59□□□□□ -0.87
PDPN-212ENST00000621990 TPH1P17752 444 aa9.59□□□□□ -0.87
PDPN-212ENST00000621990 TYMPP19971 482 aa9.59□□□□□ -0.87
PDPN-212ENST00000621990 BRCC3P46736 316 aa9.59□□□□□ -0.87
PDPN-212ENST00000621990 ARCN1P48444 511 aaKnown RBP9.59□□□□□ -0.87
PDPN-212ENST00000621990 COPAP53621 1224 aa9.59□□□□□ -0.87
PDPN-212ENST00000621990 ZYG11AQ6WRX3 759 aa9.59□□□□□ -0.87
PDPN-212ENST00000621990 ARHGAP36Q6ZRI8 547 aa9.59□□□□□ -0.87
PDPN-212ENST00000621990 ATPAF2Q8N5M1 289 aa9.59□□□□□ -0.87
PDPN-212ENST00000621990 SCAMP5Q8TAC9 235 aa9.59□□□□□ -0.87
PDPN-212ENST00000621990 FATE1Q969F0 183 aa9.59□□□□□ -0.87
PDPN-212ENST00000621990 ATXN7L3BQ96GX2 97 aa9.59□□□□□ -0.87
PDPN-212ENST00000621990 TBL1YQ9BQ87 522 aa9.59□□□□□ -0.87
PDPN-212ENST00000621990 THTPAQ9BU02 230 aa9.59□□□□□ -0.87
PDPN-212ENST00000621990 CATSPERBQ9H7T0 1116 aa9.59□□□□□ -0.87
PDPN-212ENST00000621990 GLOD4Q9HC38 313 aa9.59□□□□□ -0.87
PDPN-212ENST00000621990 FRMPD3Q5JV73 1810 aa9.58□□□□□ -0.88
PDPN-212ENST00000621990 KCNU1A8MYU2 1149 aa9.58□□□□□ -0.88
PDPN-212ENST00000621990 CCNT2O60583 730 aaKnown RBP9.58□□□□□ -0.88
PDPN-212ENST00000621990 PAGE1O75459 146 aa9.58□□□□□ -0.88
PDPN-212ENST00000621990 CIB2O75838 187 aa9.58□□□□□ -0.88
PDPN-212ENST00000621990 POMCP01189 267 aa9.58□□□□□ -0.88
PDPN-212ENST00000621990 SLC35E2BP0CK96 405 aa9.58□□□□□ -0.88
PDPN-212ENST00000621990 ARNTP27540 789 aa9.58□□□□□ -0.88
PDPN-212ENST00000621990 GABRB3P28472 473 aa9.58□□□□□ -0.88
PDPN-212ENST00000621990 CD52P31358 61 aa9.58□□□□□ -0.88
PDPN-212ENST00000621990 CCR1P32246 355 aa9.58□□□□□ -0.88
PDPN-212ENST00000621990 GRM3Q14832 879 aa9.58□□□□□ -0.88
PDPN-212ENST00000621990 CCDC6Q16204 474 aa9.58□□□□□ -0.88
PDPN-212ENST00000621990 TMCO4Q5TGY1 634 aa9.58□□□□□ -0.88
PDPN-212ENST00000621990 OVOS1Q6IE37 1185 aa9.58□□□□□ -0.88
PDPN-212ENST00000621990 ANO7Q6IWH7 933 aa9.58□□□□□ -0.88
PDPN-212ENST00000621990 PGM2L1Q6PCE3 622 aa9.58□□□□□ -0.88
PDPN-212ENST00000621990 POTEHQ6S545 545 aa9.58□□□□□ -0.88
PDPN-212ENST00000621990 LRRC49Q8IUZ0 686 aa9.58□□□□□ -0.88
PDPN-212ENST00000621990 ZNF781Q8N8C0 355 aa9.58□□□□□ -0.88
PDPN-212ENST00000621990 ACTRT2Q8TDY3 377 aa9.58□□□□□ -0.88
PDPN-212ENST00000621990 SREK1Q8WXA9 508 aaKnown RBP9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms