RNA–Protein interactions for RNA: ENST00000620675.4

NEK3-210, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-210ENST00000620675 C2orf49Q9BVC5 232 aaPredicted RBP13.92□□□□□ -0.18
NEK3-210ENST00000620675 IPO11Q9UI26 975 aaKnown RBP13.92□□□□□ -0.18
NEK3-210ENST00000620675 SNX12Q9UMY4 172 aa13.92□□□□□ -0.18
NEK3-210ENST00000620675 MRPS17Q9Y2R5 130 aaKnown RBP13.92□□□□□ -0.18
NEK3-210ENST00000620675 FCF1Q9Y324 198 aaKnown RBP13.92□□□□□ -0.18
NEK3-210ENST00000620675 ARHGAP42A6NI28 874 aa13.92□□□□□ -0.18
NEK3-210ENST00000620675 ZNF821O75541 412 aaPredicted RBP13.92□□□□□ -0.18
NEK3-210ENST00000620675 GJB3O75712 270 aa13.92□□□□□ -0.18
NEK3-210ENST00000620675 SRCP12931 536 aa13.92□□□□□ -0.18
NEK3-210ENST00000620675 COL9A1P20849 921 aa13.92□□□□□ -0.18
NEK3-210ENST00000620675 SERPINB6P35237 376 aa13.92□□□□□ -0.18
NEK3-210ENST00000620675 GARSP41250 739 aaKnown RBP13.92□□□□□ -0.18
NEK3-210ENST00000620675 OTUD4Q01804 1114 aaKnown RBP13.92□□□□□ -0.18
NEK3-210ENST00000620675 DMC1Q14565 340 aa13.92□□□□□ -0.18
NEK3-210ENST00000620675 EIF4HQ15056 248 aaKnown RBP13.92□□□□□ -0.18
NEK3-210ENST00000620675 SIX1Q15475 284 aaPredicted RBP13.92□□□□□ -0.18
NEK3-210ENST00000620675 KIAA1211LQ6NV74 962 aa13.92□□□□□ -0.18
NEK3-210ENST00000620675 ZC3H18Q86VM9 953 aaKnown RBP13.92□□□□□ -0.18
NEK3-210ENST00000620675 SLC13A5Q86YT5 568 aaPredicted RBP13.92□□□□□ -0.18
NEK3-210ENST00000620675 CHPFQ8IZ52 775 aa13.92□□□□□ -0.18
NEK3-210ENST00000620675 LZTR1Q8N653 840 aa13.92□□□□□ -0.18
NEK3-210ENST00000620675 TMEM105Q8N8V8 129 aa13.92□□□□□ -0.18
NEK3-210ENST00000620675 ATG4AQ8WYN0 398 aa13.92□□□□□ -0.18
NEK3-210ENST00000620675 TMEM245Q9H330 911 aa13.92□□□□□ -0.18
NEK3-210ENST00000620675 PRAMEF11O60813 436 aa13.91□□□□□ -0.18
NEK3-210ENST00000620675 FGGP02679 453 aa13.91□□□□□ -0.18
NEK3-210ENST00000620675 AOC1P19801 751 aa13.91□□□□□ -0.18
NEK3-210ENST00000620675 ETFBP38117 255 aa13.91□□□□□ -0.18
NEK3-210ENST00000620675 MTAPQ13126 283 aa13.91□□□□□ -0.18
NEK3-210ENST00000620675 TFDP2Q14188 446 aa13.91□□□□□ -0.18
NEK3-210ENST00000620675 FNDC3BQ53EP0 1204 aaKnown RBP13.91□□□□□ -0.18
NEK3-210ENST00000620675 SEL1L2Q5TEA6 688 aa13.91□□□□□ -0.18
NEK3-210ENST00000620675 TMEM92Q6UXU6 159 aa13.91□□□□□ -0.18
NEK3-210ENST00000620675 ZSCAN30Q86W11 494 aa13.91□□□□□ -0.18
NEK3-210ENST00000620675 SH2D3CQ8N5H7 860 aa13.91□□□□□ -0.18
NEK3-210ENST00000620675 ATPAF2Q8N5M1 289 aa13.91□□□□□ -0.18
NEK3-210ENST00000620675 FRS2Q8WU20 508 aa13.91□□□□□ -0.18
NEK3-210ENST00000620675 NAPGQ99747 312 aaPredicted RBP13.91□□□□□ -0.18
NEK3-210ENST00000620675 CEP41Q9BYV8 373 aa13.91□□□□□ -0.18
NEK3-210ENST00000620675 TNKS2Q9H2K2 1166 aa13.91□□□□□ -0.18
NEK3-210ENST00000620675 STON1Q9Y6Q2 735 aa13.91□□□□□ -0.18
NEK3-210ENST00000620675 LAMA1P25391 3075 aa13.91□□□□□ -0.18
NEK3-210ENST00000620675 ABCA7Q8IZY2 2146 aa13.91□□□□□ -0.18
NEK3-210ENST00000620675 APOC4-APOC2K7ER74 178 aa13.91□□□□□ -0.18
NEK3-210ENST00000620675 RNF103O00237 685 aa13.91□□□□□ -0.18
NEK3-210ENST00000620675 APOC2P02655 101 aa13.91□□□□□ -0.18
NEK3-210ENST00000620675 ATP5BP06576 529 aaKnown RBP13.91□□□□□ -0.18
NEK3-210ENST00000620675 SLC10A7Q0GE19 358 aa13.91□□□□□ -0.18
NEK3-210ENST00000620675 DLG2Q15700 870 aa13.91□□□□□ -0.18
NEK3-210ENST00000620675 PREPLQ4J6C6 727 aaPredicted RBP13.91□□□□□ -0.18
NEK3-210ENST00000620675 PAPD7Q5XG87 772 aaKnown RBP13.91□□□□□ -0.18
NEK3-210ENST00000620675 ATP11CQ8NB49 1132 aa13.91□□□□□ -0.18
NEK3-210ENST00000620675 ACDQ96AP0 544 aa13.91□□□□□ -0.18
NEK3-210ENST00000620675 EXOC2Q96KP1 924 aa13.91□□□□□ -0.18
NEK3-210ENST00000620675 SLC6A17Q9H1V8 727 aa13.91□□□□□ -0.18
NEK3-210ENST00000620675 PLA2G4CQ9UP65 541 aa13.91□□□□□ -0.18
NEK3-210ENST00000620675 HS3ST2Q9Y278 367 aa13.91□□□□□ -0.18
NEK3-210ENST00000620675 EFR3BQ9Y2G0 817 aa13.91□□□□□ -0.18
NEK3-210ENST00000620675 A0A1W2PQF6 199 aa13.9□□□□□ -0.18
NEK3-210ENST00000620675 TTC24A2A3L6 582 aaPredicted RBP13.9□□□□□ -0.18
NEK3-210ENST00000620675 CTAGE9A4FU28 777 aa13.9□□□□□ -0.18
NEK3-210ENST00000620675 KCNK1O00180 336 aa13.9□□□□□ -0.18
NEK3-210ENST00000620675 MUSKO15146 869 aa13.9□□□□□ -0.18
NEK3-210ENST00000620675 TGM2P21980 687 aa13.9□□□□□ -0.18
NEK3-210ENST00000620675 RGRP47804 291 aa13.9□□□□□ -0.18
NEK3-210ENST00000620675 SERPINH1P50454 418 aaKnown RBP13.9□□□□□ -0.18
NEK3-210ENST00000620675 ENPP2Q13822 863 aa13.9□□□□□ -0.18
NEK3-210ENST00000620675 NOMO1Q15155 1222 aa13.9□□□□□ -0.18
NEK3-210ENST00000620675 CYTH1Q15438 398 aa13.9□□□□□ -0.18
NEK3-210ENST00000620675 FBXO43Q4G163 708 aa13.9□□□□□ -0.18
NEK3-210ENST00000620675 CCDC181Q5TID7 509 aa13.9□□□□□ -0.18
NEK3-210ENST00000620675 SERPINA13PQ6UXR4 307 aa13.9□□□□□ -0.18
NEK3-210ENST00000620675 Q6ZVU0 165 aa13.9□□□□□ -0.18
NEK3-210ENST00000620675 CCNYQ8ND76 341 aa13.9□□□□□ -0.18
NEK3-210ENST00000620675 C1orf54Q8WWF1 131 aa13.9□□□□□ -0.18
NEK3-210ENST00000620675 P3H4Q92791 437 aa13.9□□□□□ -0.18
NEK3-210ENST00000620675 CAPZA3Q96KX2 299 aa13.9□□□□□ -0.18
NEK3-210ENST00000620675 NSMCE3Q96MG7 304 aa13.9□□□□□ -0.18
NEK3-210ENST00000620675 NELL2Q99435 816 aa13.9□□□□□ -0.18
NEK3-210ENST00000620675 OSBPL6Q9BZF3 934 aa13.9□□□□□ -0.18
NEK3-210ENST00000620675 TM6SF2Q9BZW4 377 aa13.9□□□□□ -0.18
NEK3-210ENST00000620675 CHRDQ9H2X0 955 aa13.9□□□□□ -0.18
NEK3-210ENST00000620675 SP110Q9HB58 689 aa13.9□□□□□ -0.18
NEK3-210ENST00000620675 CD248Q9HCU0 757 aa13.9□□□□□ -0.18
NEK3-210ENST00000620675 TIMM44O43615 452 aa13.89□□□□□ -0.19
NEK3-210ENST00000620675 BNIP3LO60238 219 aa13.89□□□□□ -0.19
NEK3-210ENST00000620675 TMCC1O94876 653 aa13.89□□□□□ -0.19
NEK3-210ENST00000620675 TJP3O95049 919 aa13.89□□□□□ -0.19
NEK3-210ENST00000620675 EPHX1P07099 455 aa13.89□□□□□ -0.19
NEK3-210ENST00000620675 ZFXP17010 805 aaPredicted RBP13.89□□□□□ -0.19
NEK3-210ENST00000620675 MSNP26038 577 aaKnown RBP13.89□□□□□ -0.19
NEK3-210ENST00000620675 NTSR1P30989 418 aa13.89□□□□□ -0.19
NEK3-210ENST00000620675 SULT2A1Q06520 285 aa13.89□□□□□ -0.19
NEK3-210ENST00000620675 ZBTB17Q13105 803 aa13.89□□□□□ -0.19
NEK3-210ENST00000620675 LRRC32Q14392 662 aa13.89□□□□□ -0.19
NEK3-210ENST00000620675 ACCSLQ4AC99 568 aa13.89□□□□□ -0.19
NEK3-210ENST00000620675 ATXN7L2Q5T6C5 722 aaPredicted RBP13.89□□□□□ -0.19
NEK3-210ENST00000620675 NUDT18Q6ZVK8 323 aa13.89□□□□□ -0.19
NEK3-210ENST00000620675 CACUL1Q86Y37 369 aa13.89□□□□□ -0.19
NEK3-210ENST00000620675 PGBD5Q8N414 524 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms