RNA–Protein interactions for RNA: ENST00000612467.1

PCDHGA3-202, Transcript of protocadherin gamma subfamily A, 3, humanhuman

TSL 2

Gene PCDHGA3, Length 2,712 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-202ENST00000612467 MTF2Q9Y483 593 aaPredicted RBP14.34□□□□□ -0.11
PCDHGA3-202ENST00000612467 A0A1W2PQH9 124 aa14.33□□□□□ -0.12
PCDHGA3-202ENST00000612467 SPECC1L-ADORA2AF8WAN1 911 aa14.33□□□□□ -0.12
PCDHGA3-202ENST00000612467 SIN3BO75182 1162 aa14.33□□□□□ -0.12
PCDHGA3-202ENST00000612467 GJB3O75712 270 aa14.33□□□□□ -0.12
PCDHGA3-202ENST00000612467 PDE5AO76074 875 aa14.33□□□□□ -0.12
PCDHGA3-202ENST00000612467 VAPBO95292 243 aa14.33□□□□□ -0.12
PCDHGA3-202ENST00000612467 TBX18O95935 607 aa14.33□□□□□ -0.12
PCDHGA3-202ENST00000612467 ARSAP15289 507 aa14.33□□□□□ -0.12
PCDHGA3-202ENST00000612467 SPRP35270 261 aaPredicted RBP14.33□□□□□ -0.12
PCDHGA3-202ENST00000612467 ABCE1P61221 599 aaKnown RBP14.33□□□□□ -0.12
PCDHGA3-202ENST00000612467 CCDC6Q16204 474 aa14.33□□□□□ -0.12
PCDHGA3-202ENST00000612467 SLC39A12Q504Y0 691 aa14.33□□□□□ -0.12
PCDHGA3-202ENST00000612467 ARTNQ5T4W7 220 aa14.33□□□□□ -0.12
PCDHGA3-202ENST00000612467 ACMSDQ8TDX5 336 aa14.33□□□□□ -0.12
PCDHGA3-202ENST00000612467 KCTD4Q8WVF5 259 aa14.33□□□□□ -0.12
PCDHGA3-202ENST00000612467 SGF29Q96ES7 293 aa14.33□□□□□ -0.12
PCDHGA3-202ENST00000612467 OMDQ99983 421 aa14.33□□□□□ -0.12
PCDHGA3-202ENST00000612467 NAT9Q9BTE0 207 aa14.33□□□□□ -0.12
PCDHGA3-202ENST00000612467 NMRK1Q9NWW6 199 aa14.33□□□□□ -0.12
PCDHGA3-202ENST00000612467 SLC7A8Q9UHI5 535 aa14.33□□□□□ -0.12
PCDHGA3-202ENST00000612467 SUFUQ9UMX1 484 aa14.33□□□□□ -0.12
PCDHGA3-202ENST00000612467 Q9Y3F1 56 aa14.33□□□□□ -0.12
PCDHGA3-202ENST00000612467 NYNRINQ9P2P1 1898 aaKnown RBP14.33□□□□□ -0.12
PCDHGA3-202ENST00000612467 GPR182O15218 404 aa14.33□□□□□ -0.12
PCDHGA3-202ENST00000612467 IRAK2O43187 625 aa14.33□□□□□ -0.12
PCDHGA3-202ENST00000612467 DDHD2O94830 711 aa14.33□□□□□ -0.12
PCDHGA3-202ENST00000612467 PSMG1O95456 288 aa14.33□□□□□ -0.12
PCDHGA3-202ENST00000612467 HLA-DQB2P05538 268 aa14.33□□□□□ -0.12
PCDHGA3-202ENST00000612467 SERPINA6P08185 405 aa14.33□□□□□ -0.12
PCDHGA3-202ENST00000612467 MPSTP25325 297 aa14.33□□□□□ -0.12
PCDHGA3-202ENST00000612467 PRKCZQ05513 592 aa14.33□□□□□ -0.12
PCDHGA3-202ENST00000612467 BTBD8Q5XKL5 378 aa14.33□□□□□ -0.12
PCDHGA3-202ENST00000612467 CCNJLQ8IV13 435 aa14.33□□□□□ -0.12
PCDHGA3-202ENST00000612467 ULK2Q8IYT8 1036 aa14.33□□□□□ -0.12
PCDHGA3-202ENST00000612467 ATPAF2Q8N5M1 289 aa14.33□□□□□ -0.12
PCDHGA3-202ENST00000612467 APBB2Q92870 758 aa14.33□□□□□ -0.12
PCDHGA3-202ENST00000612467 NAF1Q96HR8 494 aaKnown RBP14.33□□□□□ -0.12
PCDHGA3-202ENST00000612467 KLHL5Q96PQ7 755 aa14.33□□□□□ -0.12
PCDHGA3-202ENST00000612467 TSPAN18Q96SJ8 248 aa14.33□□□□□ -0.12
PCDHGA3-202ENST00000612467 ACBD6Q9BR61 282 aa14.33□□□□□ -0.12
PCDHGA3-202ENST00000612467 WDR55Q9H6Y2 383 aaPredicted RBP14.33□□□□□ -0.12
PCDHGA3-202ENST00000612467 AHSGP02765 367 aa14.32□□□□□ -0.12
PCDHGA3-202ENST00000612467 SBK3P0C264 359 aa14.32□□□□□ -0.12
PCDHGA3-202ENST00000612467 MX2P20592 715 aa14.32□□□□□ -0.12
PCDHGA3-202ENST00000612467 HCAR3P49019 387 aa14.32□□□□□ -0.12
PCDHGA3-202ENST00000612467 SERPINB8P50452 374 aa14.32□□□□□ -0.12
PCDHGA3-202ENST00000612467 USP46P62068 366 aa14.32□□□□□ -0.12
PCDHGA3-202ENST00000612467 DCLRE1AQ6PJP8 1040 aa14.32□□□□□ -0.12
PCDHGA3-202ENST00000612467 RIPOR1Q6ZS17 1223 aa14.32□□□□□ -0.12
PCDHGA3-202ENST00000612467 METTL23Q86XA0 190 aa14.32□□□□□ -0.12
PCDHGA3-202ENST00000612467 CEP97Q8IW35 865 aa14.32□□□□□ -0.12
PCDHGA3-202ENST00000612467 HIPK4Q8NE63 616 aa14.32□□□□□ -0.12
PCDHGA3-202ENST00000612467 CCDC124Q96CT7 223 aaKnown RBP14.32□□□□□ -0.12
PCDHGA3-202ENST00000612467 OR52B2Q96RD2 323 aa14.32□□□□□ -0.12
PCDHGA3-202ENST00000612467 TASP1Q9H6P5 420 aa14.32□□□□□ -0.12
PCDHGA3-202ENST00000612467 HCSTQ9UBK5 93 aa14.32□□□□□ -0.12
PCDHGA3-202ENST00000612467 DCXO43602 365 aa14.32□□□□□ -0.12
PCDHGA3-202ENST00000612467 ZBTB14O43829 449 aa14.32□□□□□ -0.12
PCDHGA3-202ENST00000612467 MAFKO60675 156 aa14.32□□□□□ -0.12
PCDHGA3-202ENST00000612467 F9P00740 461 aa14.32□□□□□ -0.12
PCDHGA3-202ENST00000612467 JUNP05412 331 aaKnown RBP14.32□□□□□ -0.12
PCDHGA3-202ENST00000612467 ARNTP27540 789 aa14.32□□□□□ -0.12
PCDHGA3-202ENST00000612467 SERPINB6P35237 376 aa14.32□□□□□ -0.12
PCDHGA3-202ENST00000612467 TUBP50607 506 aa14.32□□□□□ -0.12
PCDHGA3-202ENST00000612467 EPHB1P54762 984 aa14.32□□□□□ -0.12
PCDHGA3-202ENST00000612467 SEPT6Q14141 434 aa14.32□□□□□ -0.12
PCDHGA3-202ENST00000612467 RPS27LQ71UM5 84 aaKnown RBP14.32□□□□□ -0.12
PCDHGA3-202ENST00000612467 MARK4Q96L34 752 aa14.32□□□□□ -0.12
PCDHGA3-202ENST00000612467 GATA5Q9BWX5 397 aaPredicted RBP14.32□□□□□ -0.12
PCDHGA3-202ENST00000612467 DCLRE1BQ9H816 532 aa14.32□□□□□ -0.12
PCDHGA3-202ENST00000612467 COG4Q9H9E3 785 aa14.32□□□□□ -0.12
PCDHGA3-202ENST00000612467 DNAJB4Q9UDY4 337 aa14.32□□□□□ -0.12
PCDHGA3-202ENST00000612467 SOX13Q9UN79 622 aa14.32□□□□□ -0.12
PCDHGA3-202ENST00000612467 APOBEC2Q9Y235 224 aaKnown RBP14.32□□□□□ -0.12
PCDHGA3-202ENST00000612467 A0A0U1RQF3 1178 aa14.31□□□□□ -0.12
PCDHGA3-202ENST00000612467 MANSC4A6NHS7 340 aaPredicted RBP14.31□□□□□ -0.12
PCDHGA3-202ENST00000612467 HSPA4LO95757 839 aa14.31□□□□□ -0.12
PCDHGA3-202ENST00000612467 RPL9P32969 192 aaKnown RBP14.31□□□□□ -0.12
PCDHGA3-202ENST00000612467 CPOXP36551 454 aa14.31□□□□□ -0.12
PCDHGA3-202ENST00000612467 MAGEA12P43365 314 aa14.31□□□□□ -0.12
PCDHGA3-202ENST00000612467 CDH17Q12864 832 aa14.31□□□□□ -0.12
PCDHGA3-202ENST00000612467 USP10Q14694 798 aaKnown RBP14.31□□□□□ -0.12
PCDHGA3-202ENST00000612467 CNGA3Q16281 694 aa14.31□□□□□ -0.12
PCDHGA3-202ENST00000612467 ZNF789Q5FWF6 425 aa14.31□□□□□ -0.12
PCDHGA3-202ENST00000612467 SNX30Q5VWJ9 437 aa14.31□□□□□ -0.12
PCDHGA3-202ENST00000612467 ITPRIPL1Q6GPH6 555 aa14.31□□□□□ -0.12
PCDHGA3-202ENST00000612467 DENND5AQ6IQ26 1287 aa14.31□□□□□ -0.12
PCDHGA3-202ENST00000612467 MRPL10Q7Z7H8 261 aaKnown RBP14.31□□□□□ -0.12
PCDHGA3-202ENST00000612467 SAPCD2Q86UD0 394 aa14.31□□□□□ -0.12
PCDHGA3-202ENST00000612467 RTN4RL1Q86UN2 441 aaPredicted RBP14.31□□□□□ -0.12
PCDHGA3-202ENST00000612467 CIR1Q86X95 450 aaPredicted RBP14.31□□□□□ -0.12
PCDHGA3-202ENST00000612467 TMPRSS6Q8IU80 811 aa14.31□□□□□ -0.12
PCDHGA3-202ENST00000612467 SPATA2LQ8IUW3 424 aaPredicted RBP14.31□□□□□ -0.12
PCDHGA3-202ENST00000612467 SCUBE1Q8IWY4 988 aa14.31□□□□□ -0.12
PCDHGA3-202ENST00000612467 KBTBD2Q8IY47 623 aa14.31□□□□□ -0.12
PCDHGA3-202ENST00000612467 PPP4R1Q8TF05 950 aa14.31□□□□□ -0.12
PCDHGA3-202ENST00000612467 SOCS4Q8WXH5 440 aa14.31□□□□□ -0.12
PCDHGA3-202ENST00000612467 NMRAL1Q9HBL8 299 aa14.31□□□□□ -0.12
PCDHGA3-202ENST00000612467 CHST12Q9NRB3 414 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms