RNA–Protein interactions for RNA: ENST00000611712.4

LIG4-204, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 4 BASIC

Gene LIG4, Length 4,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-204ENST00000611712 MGAT5BQ3V5L5 792 aa8.83□□□□□ -1
LIG4-204ENST00000611712 PLEKHG4Q58EX7 1191 aa8.83□□□□□ -1
LIG4-204ENST00000611712 SYPL2Q5VXT5 272 aa8.83□□□□□ -1
LIG4-204ENST00000611712 LCA5Q86VQ0 697 aa8.83□□□□□ -1
LIG4-204ENST00000611712 EFHBQ8N7U6 833 aa8.83□□□□□ -1
LIG4-204ENST00000611712 TUBGCP3Q96CW5 907 aa8.83□□□□□ -1
LIG4-204ENST00000611712 AGAP2Q99490 1192 aa8.83□□□□□ -1
LIG4-204ENST00000611712 SEPT5Q99719 369 aaPredicted RBP8.83□□□□□ -1
LIG4-204ENST00000611712 HNRNPABQ99729 332 aaKnown RBP8.83□□□□□ -1
LIG4-204ENST00000611712 POMKQ9H5K3 350 aa8.83□□□□□ -1
LIG4-204ENST00000611712 VRTNQ9H8Y1 702 aa8.83□□□□□ -1
LIG4-204ENST00000611712 COPS7BQ9H9Q2 264 aaPredicted RBP8.83□□□□□ -1
LIG4-204ENST00000611712 SLC7A8Q9UHI5 535 aa8.83□□□□□ -1
LIG4-204ENST00000611712 SMIM35A0A1B0GVV1 85 aa8.83□□□□□ -1
LIG4-204ENST00000611712 TYW5A2RUC4 315 aaKnown RBP8.83□□□□□ -1
LIG4-204ENST00000611712 BNIP3LO60238 219 aa8.83□□□□□ -1
LIG4-204ENST00000611712 F7P08709 466 aaPredicted RBP8.83□□□□□ -1
LIG4-204ENST00000611712 PROZP22891 400 aa8.83□□□□□ -1
LIG4-204ENST00000611712 ZNF157P51786 506 aaPredicted RBP8.83□□□□□ -1
LIG4-204ENST00000611712 ZNF135P52742 658 aaPredicted RBP8.83□□□□□ -1
LIG4-204ENST00000611712 LIMK2P53671 638 aa8.83□□□□□ -1
LIG4-204ENST00000611712 RBBP7Q16576 425 aa8.83□□□□□ -1
LIG4-204ENST00000611712 FSCN1Q16658 493 aaKnown RBP8.83□□□□□ -1
LIG4-204ENST00000611712 LPCAT4Q643R3 524 aa8.83□□□□□ -1
LIG4-204ENST00000611712 OTOP3Q7RTS5 596 aa8.83□□□□□ -1
LIG4-204ENST00000611712 LZTR1Q8N653 840 aa8.83□□□□□ -1
LIG4-204ENST00000611712 PCDH20Q8N6Y1 951 aaKnown RBP8.83□□□□□ -1
LIG4-204ENST00000611712 ZSCAN18Q8TBC5 510 aaPredicted RBP8.83□□□□□ -1
LIG4-204ENST00000611712 PRR11Q96HE9 360 aaPredicted RBP8.83□□□□□ -1
LIG4-204ENST00000611712 RBBP8Q99708 897 aa8.83□□□□□ -1
LIG4-204ENST00000611712 MRPL46Q9H2W6 279 aaKnown RBP8.83□□□□□ -1
LIG4-204ENST00000611712 CAAP1Q9H8G2 361 aa8.83□□□□□ -1
LIG4-204ENST00000611712 WDR41Q9HAD4 459 aa8.83□□□□□ -1
LIG4-204ENST00000611712 TBC1D13Q9NVG8 400 aa8.83□□□□□ -1
LIG4-204ENST00000611712 SNX10Q9Y5X0 201 aa8.83□□□□□ -1
LIG4-204ENST00000611712 TMEM114B3SHH9 223 aa8.82□□□□□ -1
LIG4-204ENST00000611712 CABYRO75952 493 aa8.82□□□□□ -1
LIG4-204ENST00000611712 RHOBTB1O94844 696 aa8.82□□□□□ -1
LIG4-204ENST00000611712 CLPTM1O96005 669 aa8.82□□□□□ -1
LIG4-204ENST00000611712 PTPN3P26045 913 aa8.82□□□□□ -1
LIG4-204ENST00000611712 RGS2P41220 211 aa8.82□□□□□ -1
LIG4-204ENST00000611712 RENBPP51606 427 aa8.82□□□□□ -1
LIG4-204ENST00000611712 CRYBB1P53674 252 aaPredicted RBP8.82□□□□□ -1
LIG4-204ENST00000611712 INPP5AQ14642 412 aa8.82□□□□□ -1
LIG4-204ENST00000611712 LIPMQ5VYY2 423 aa8.82□□□□□ -1
LIG4-204ENST00000611712 MRNIPQ6NTE8 343 aa8.82□□□□□ -1
LIG4-204ENST00000611712 AAGABQ6PD74 315 aa8.82□□□□□ -1
LIG4-204ENST00000611712 USP50Q70EL3 339 aaPredicted RBP8.82□□□□□ -1
LIG4-204ENST00000611712 UBR7Q8N806 425 aa8.82□□□□□ -1
LIG4-204ENST00000611712 ZNF781Q8N8C0 355 aa8.82□□□□□ -1
LIG4-204ENST00000611712 SKA1Q96BD8 255 aa8.82□□□□□ -1
LIG4-204ENST00000611712 RCN3Q96D15 328 aa8.82□□□□□ -1
LIG4-204ENST00000611712 ZNF333Q96JL9 665 aa8.82□□□□□ -1
LIG4-204ENST00000611712 PRKD2Q9BZL6 878 aa8.82□□□□□ -1
LIG4-204ENST00000611712 RNF39Q9H2S5 420 aa8.82□□□□□ -1
LIG4-204ENST00000611712 TRPC7Q9HCX4 862 aa8.82□□□□□ -1
LIG4-204ENST00000611712 S100A14Q9HCY8 104 aa8.82□□□□□ -1
LIG4-204ENST00000611712 CYLDQ9NQC7 956 aa8.82□□□□□ -1
LIG4-204ENST00000611712 ENTPD7Q9NQZ7 604 aa8.82□□□□□ -1
LIG4-204ENST00000611712 APPL1Q9UKG1 709 aa8.82□□□□□ -1
LIG4-204ENST00000611712 CDH9Q9ULB4 789 aa8.82□□□□□ -1
LIG4-204ENST00000611712 LTBP4Q8N2S1 1624 aa8.82□□□□□ -1
LIG4-204ENST00000611712 YJEFN3A6XGL0 299 aa8.82□□□□□ -1
LIG4-204ENST00000611712 T-ENOLP0DO92 83 aa8.82□□□□□ -1
LIG4-204ENST00000611712 PIK3R1P27986 724 aa8.82□□□□□ -1
LIG4-204ENST00000611712 IDH3AP50213 366 aa8.82□□□□□ -1
LIG4-204ENST00000611712 IL1RL1Q01638 556 aa8.82□□□□□ -1
LIG4-204ENST00000611712 ZNF618Q5T7W0 954 aa8.82□□□□□ -1
LIG4-204ENST00000611712 THEMIS2Q5TEJ8 643 aa8.82□□□□□ -1
LIG4-204ENST00000611712 RNF220Q5VTB9 566 aa8.82□□□□□ -1
LIG4-204ENST00000611712 CRYBG2Q8N1P7 616 aa8.82□□□□□ -1
LIG4-204ENST00000611712 ATP6V0D2Q8N8Y2 350 aa8.82□□□□□ -1
LIG4-204ENST00000611712 ABTB1Q969K4 478 aaPredicted RBP8.82□□□□□ -1
LIG4-204ENST00000611712 MYLPFQ96A32 169 aa8.82□□□□□ -1
LIG4-204ENST00000611712 NMD3Q96D46 503 aaKnown RBP8.82□□□□□ -1
LIG4-204ENST00000611712 ZMAT2Q96NC0 199 aaKnown RBP8.82□□□□□ -1
LIG4-204ENST00000611712 NDNQ99608 321 aa8.82□□□□□ -1
LIG4-204ENST00000611712 CCT7Q99832 543 aa8.82□□□□□ -1
LIG4-204ENST00000611712 GATA5Q9BWX5 397 aaPredicted RBP8.82□□□□□ -1
LIG4-204ENST00000611712 RHOJQ9H4E5 214 aa8.82□□□□□ -1
LIG4-204ENST00000611712 FBXO5Q9UKT4 447 aa8.82□□□□□ -1
LIG4-204ENST00000611712 DSEQ9UL01 958 aa8.82□□□□□ -1
LIG4-204ENST00000611712 HEATR9A2RTY3 570 aa8.82□□□□□ -1
LIG4-204ENST00000611712 RAB10P61026 200 aa8.82□□□□□ -1
LIG4-204ENST00000611712 OLIG2Q13516 323 aa8.82□□□□□ -1
LIG4-204ENST00000611712 FASTKQ14296 549 aaKnown RBP8.82□□□□□ -1
LIG4-204ENST00000611712 GRM3Q14832 879 aa8.82□□□□□ -1
LIG4-204ENST00000611712 GSTA3Q16772 222 aa8.82□□□□□ -1
LIG4-204ENST00000611712 TREML1Q86YW5 311 aa8.82□□□□□ -1
LIG4-204ENST00000611712 BHLHE22Q8NFJ8 381 aaPredicted RBP8.82□□□□□ -1
LIG4-204ENST00000611712 UCMAQ8WVF2 138 aa8.82□□□□□ -1
LIG4-204ENST00000611712 LENG1Q96BZ8 264 aaPredicted RBP8.82□□□□□ -1
LIG4-204ENST00000611712 HIC2Q96JB3 615 aa8.82□□□□□ -1
LIG4-204ENST00000611712 MYBPHLA2RUH7 354 aa8.81□□□□□ -1
LIG4-204ENST00000611712 BTBD19C9JJ37 291 aa8.81□□□□□ -1
LIG4-204ENST00000611712 TK2O00142 265 aa8.81□□□□□ -1
LIG4-204ENST00000611712 TP73O15350 636 aa8.81□□□□□ -1
LIG4-204ENST00000611712 LRIG2O94898 1065 aa8.81□□□□□ -1
LIG4-204ENST00000611712 HNRNPLP14866 589 aaKnown RBP eCLIP8.81□□□□□ -1
LIG4-204ENST00000611712 ALDH1A3P47895 512 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms